Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,299,162	G→A	Y139Y (TAC→TAT)	napH ←	ferredoxin‑type protein NapH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,299,162	0	G	A	100.0%	156.7 / NA	47	Y139Y (TAC→TAT)	napH	ferredoxin‑type protein NapH
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (31/16);  total (31/16)

GGTGGCCGCAACGGTAATCACACCTTTGCTACCCAGCACGCCATACAGCGCGCCAACCGGACAAATGTGCCCGCACCAGCCGTGTTCAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACGTAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCACCGGTCAACGCCACCGTGGCAGGCAGATGACCACTGGCAAGACTTTGCAGCGTCATCAGCGGATCGGTCAGCGGAACGGTGTCGAATAA  >  NC_000913/2298916‑2299404                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                   ggTGGCCGCAACGGTAATCACACCTTTGCTACCCAGCACGCCATACAGCGCGCCAACCGGACAAATGTGCCCGCACCAGCCGTGTTCAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGc                                                                                                                                                                                                                                                <  1:269460/251‑1 (MQ=255)                  tCACACCTTTGCTACCCAGCACGCCATACAGCGCGCCAACCGGACAAATGTGCCCGCACCAGCCGTGTTGAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTAAGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGAtc                                                                                                                                                                                                                               >  1:224760/1‑251 (MQ=255)                  tCACACCTTTGCTACCCAGCACGCCATACAGCGCGCCAACCGGACAAATGTGCCCGCACCAGCCGTGTTCAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAACACATAGCGAATGTGGCGAGGGagc                                                                                                                                                                                                                               >  2:251276/1‑249 (MQ=255)                   cactccTTTGCTACCCAGCTCGCCATACAGCGCGCCAACCGGACAAATGTGCCCGCACCAGCCGTGTTCAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGAtcg                                                                                                                                                                                                                              <  1:60665/247‑1 (MQ=255)                                        gCCATACAGCGCGCCAACCGGACAAATGTGCCCGCACCAGCCGTGTTCAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCCGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCa                                                                                                                                                                                                          >  1:115314/1‑250 (MQ=255)                                                      cAACCGGACAAATGTGCCCGCACCAGCCGTGTTCAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAAc                                                                                                                                                                                           >  1:303965/1‑251 (MQ=255)                                                            gACAAATGTGCCCGCACCAGCCGTGTTCAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTc                                                                                                                                                                                     <  1:32530/251‑1 (MQ=255)                                                                          cACCAGCCGTGTTCAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGATGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAAcc                                                                                                                                                                                          <  1:256816/232‑1 (MQ=255)                                                                          cACCAGCCGTGTTCAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGATGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGGCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAAcc                                                                                                                                                                                          >  2:256816/1‑232 (MQ=255)                                                                           aCCAGCCGTGTTCAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATc                                                                                                                                                                      <  1:94586/251‑1 (MQ=255)                                                                            ccAGCCGTGTTCAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGATGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCg                                                                                                                                                                     <  2:307104/251‑1 (MQ=255)                                                                                  gtgtTAAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGACACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGCGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTc                                                                                                                                                                >  2:275382/1‑250 (MQ=255)                                                                                   tgtTCAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCCGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGCGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTCAGTCGGTAATCGGGTTc                                                                                                                                                                >  1:134070/1‑249 (MQ=255)                                                                                           gACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGAGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAAACAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGc                                                                                                                                                         >  2:180060/1‑248 (MQ=255)                                                                                                gTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATCGCGAATGTGGCGAGGGCTCGTCGCAGACTGATTGGGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGAAATCGGGTTCAGCGGGCAGcccc                                                                                                                                                   >  2:250456/1‑249 (MQ=255)                                                                                                  aGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCt                                                                                                                                               >  1:311562/1‑251 (MQ=255)                                                                                                    aTCAAAAAAAAACACCGAGCGAATAACCAGCGCGCCGCTGCCGCAGACCATTACCAAACTACGACCCCTCAGAGAAAAGGGGCTGAACCATTCCCAAAAGAGCGTGCCAGCTTAGGCTGCTCACACAAGACTGACCACCAACAGCACATAGCGAATGTGGCGAGGGAACGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGACGGTAATCGGGTTCAGCGGGCAGACCCAGCTGc                                                                                                                                             >  2:122855/1‑251 (MQ=255)                                                                                                             aaaCAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCAATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGATAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGAGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTACGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGAGCAGACCCAGCAGCCAaataat                                                                                                                                     >  2:172026/1‑250 (MQ=255)                                                                                                              aaCAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCCGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAACATAATCg                                                                                                                                   >  1:180492/1‑251 (MQ=255)                                                                                                               aCAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGc                                                                                                                                  >  1:12491/1‑251 (MQ=255)                                                                                                                cAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATACATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCt                                                                                                                                 >  1:110537/1‑251 (MQ=255)                                                                                                                     cgAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTccc                                                                                                                            >  1:267253/1‑251 (MQ=255)                                                                                                                      gagaATAAGCGGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCCTTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGCCCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTCACCAGTTCGCTAAGTCGGTACTCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTcccc                                                                                                                           >  1:161523/1‑250 (MQ=255)                                                                                                                                     gccgcTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCa                                                                                                            <  1:169184/251‑1 (MQ=255)                                                                                                                                                 gCCCATCACCAGGCTACGCCCCATCAGAGAAGCGGGGTTGAGCCATTCCCAAATGAGCGTGCCAGTTAAGGCGGATCCCCCCAGAACTACCACCAACAGCACATAGCGAATGTGGCGAGGGAGCGGCGCAGACGGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTATTCGGTTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACTGTGATAATca                                                                                                <  2:234331/251‑1 (MQ=255)                                                                                                                                                  cccATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGGAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAACATAATCGCTTTCCCGCCAGGGCGTAGAGCCCGGTGATAATcac                                                                                               >  2:116263/1‑251 (MQ=255)                                                                                                                                                    cATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATcaccg                                                                                             >  1:216360/1‑251 (MQ=255)                                                                                                                                                     aTTACCAGGCTACGCCCCATCAGAGAAATGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGATTCAGAGGGCAAACCCAGCTGAAAAATAATCGCTTTACCGCCAGGGCGTAGAGCAAGGTGATAAtacccgc                                                                                            >  2:112836/1‑245 (MQ=255)                                                                                                                                                     aTTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCATGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAACACGGTGATAATccccgc                                                                                            >  2:164158/1‑251 (MQ=255)                                                                                                                                                       tACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCAAAATGAGCGTGCCAGTTAAGGATGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGCTCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCGAAATAATCGCTTTCCCGCCAGGGCGTAGCACACGGAGATAATcaccgccc                                                                                          >  2:98967/1‑249 (MQ=255)                                                                                                                                                             gCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCACCGGTc                                                                                     >  1:156694/1‑250 (MQ=255)                                                                                                                                                                 cGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACACAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCCCCGGTCAACGc                                                                                >  1:272575/1‑251 (MQ=255)                                                                                                                                                                         cAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCACCGGTCAACGCCACCGTgg                                                                        >  1:136885/1‑251 (MQ=255)                                                                                                                                                                              aaaCGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGAGATAATCACCGCACCGGTCAACGCCACCGTggcaggc                                                                   >  2:167264/1‑251 (MQ=255)                                                                                                                                                                                    ggTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCACCGGTCAACGCCCCCGTggcc                                                                      >  2:178481/1‑241 (MQ=255)                                                                                                                                                                                    ggTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCACCGGTCAACGCCACCGTggca                                                                      <  1:178481/242‑1 (MQ=255)                                                                                                                                                                                             aTTCCAAAATGAGCGTGCCAGATAAGGCTGATCCCACCAGAATGACCAACAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGATCAGCGGGCCGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGCTAATCACCGCACCGGTCAACGCCACCGTgtcaggccaaataccactggc                                                     >  2:103693/1‑236 (MQ=255)                                                                                                                                                                                                cccAAATGAGCGTGCCAGTTAAGGCTGATCCCGCCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCACCGGTCAACGCCACCGTGGCAGTCAGATGACCACTGGCAAg                                                  <  1:234077/250‑1 (MQ=255)                                                                                                                                                                                                cccAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCACCGGTCAACGCCACCGTGGCAGGCAGATGACCACTGGCa                                                    >  1:276685/1‑248 (MQ=255)                                                                                                                                                                                                   aaaTGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCACCGGTCAACGCCACCGTGGCAGGCGGCTGACCACTGGCAAGACtt                                              >  1:7804/1‑251 (MQ=255)                                                                                                                                                                                                             gCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGGGGCGAGGGATCGTAGCAGTCTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGCCCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCACCGGTCAACGCCACCGTGGCAGGCAGATGACCACTGGCAAGACTTTGCAGCGtc                                     <  2:12491/250‑1 (MQ=255)                                                                                                                                                                                                                     aGGCTGATCCCACCAGAATGACCACCAACAGCACATAGCGAATGTGGCGCGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCACCGGTCAACGCCACCGTGGCAGGCAGATGACCACTGGCAAGACTTTGCAGCGTCATCAGCggg                            >  1:44187/1‑250 (MQ=255)                                                                                                                                                                                                                          gttCCCACCAGACTGACCACCACCAGCACATAGCGAATGTGGTGAGGGATCGTCGCAGACTGATGGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGTTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCACCGGTCAACGCCACCGTGGCAGGCAGATGACTACTGGCAAGACTTTGCAGCGTCATCAGCGGATCgg                        <  2:50350/248‑1 (MQ=255)                                                                                                                                                                                                                                    gAATGACCACCAACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCCCCGCACCGGTCAACGCCACCGTGGCAGGCAGATGACCACTGGCAAGACTTTGCAGCGTCATCAGCGGATCGGTCAGCGGAACg             <  2:119681/251‑1 (MQ=255)                                                                                                                                                                                                                                        gACCACCAACAGCACATAGCGAATGTGGTGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCATCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGATCACGGTGATAATCACCGCACCGGTCAACGCCACCGTGGCAGGCAGATGACCACTTGCAAGACTTTGCAGCGTCATCAGCGGATCGGTCAGCGGAACGgtgt         <  1:168185/251‑1 (MQ=255)                                                                                                                                                                                                                                          ccaccaACAGCACATAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCACCGGTCAACGCCACCGTGGCAGGCAGATGACCACTGGCAAGACTTTGCAGCGTCATCAGCGGATCGGTCAGCGGAACGGTGTCg       <  2:115314/251‑1 (MQ=255)                                                                                                                                                                                                                                               aaCAGCACATAGCTAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCACCGGTCAACGCCACCGTGGCAGGCAGATGACCACTGGCAAGACTTTGCAGCGTCATCAGCGGATCGGTCAGCGGAACGGTGTCGAATaa  <  2:252174/251‑1 (MQ=255)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                   GGTGGCCGCAACGGTAATCACACCTTTGCTACCCAGCACGCCATACAGCGCGCCAACCGGACAAATGTGCCCGCACCAGCCGTGTTCAACGACCAGTAGATCAAATAAAAACAGCGCGAGAATAAGCAGCGCGCCGCTGCCGAAGCCCATTACCAGGCTACGCCCCATCAGAGAAACGGGGTTGATCCATTCCCAAATGAGCGTGCCAGTTAAGGCTGATCCCACCAGAATGACCACCAACAGCACGTAGCGAATGTGGCGAGGGATCGTCGCAGACTGATTGAGGTCAAAGCGCCTGCGTAACCAGTTCGCTAAGTCGGTAATCGGGTTCAGCGGGCAGACCCAGCTGCAAAATAATCGCTTTCCCGCCAGGGCGTAGAGCACGGTGATAATCACCGCACCGGTCAACGCCACCGTGGCAGGCAGATGACCACTGGCAAGACTTTGCAGCGTCATCAGCGGATCGGTCAGCGGAACGGTGTCGAATAA  >  NC_000913/2298916‑2299404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑