| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,649,932 | IS2 (+) +5 bp | coding (139‑143/192 nt) | ydfD → | lysis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1467910 = | NA (NA) | 18 (0.590) | 18/490 | 0.6 | 100% | noncoding (1331/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 1649932 = | 0 (0.000) | coding (139/192 nt) | ydfD | lysis protein | |||||
| * | ? | NC_000913 | = 1649936 | 0 (0.000) | 16 (0.530) | 14/490 | 0.8 | 100% | coding (143/192 nt) | ydfD | lysis protein |
| ? | NC_000913 | = 2070271 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
TTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATGCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTAAAACAGTTCCGTAATAAATATCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGCGCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGA > NC_000913/1649685‑1650175 | tgcggagtccggagagtaacggaatagcagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCgg > 1:31759‑M2/248‑251 (MQ=255) aTGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATGCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTtagactgg < 1:6833‑M1/251‑9 (MQ=255) tGCCATTCACAAGAGAAAACCAGAACGGGAGCTATTAAATACAATATGCATTGTTTCAATGATGGCTCGTTCACGTCTGCTGCCAAAAGGAAGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCAAGTTGATATTGCAGTCAGTGTTCACAGGAAAATGCAGGAGTGTATGACTGCAGCAACCGGACAGAAAATTCCCGGTAACTGTTACCCGGGtagactggc > 2:18678‑M1/1‑242 (MQ=255) aaaaCAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATGCCGGCCCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGGAACTGTTACCCGGTtagactggccccctgaatctcc > 1:283942‑M1/1‑227 (MQ=255) cGGGAGCTATTAAATAAAATATGCATTGTTTCAATGCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTtagactggccccctgaatctccagacaaccaat > 2:111300‑M1/1‑217 (MQ=255) aaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCa < 2:243440‑M2/45‑1 (MQ=255) gataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCt > 1:252168‑M2/202‑251 (MQ=255) gcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccgtgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatatagtggcaaatccaCCGGGCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTaaaa < 1:276019‑M2/56‑1 (MQ=255) aataTGCATTGTTTCAATGCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgat < 1:111300‑M1/251‑52 (MQ=255) gtgacgacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTAAAACa < 2:11263‑M2/58‑1 (MQ=255) atcagtatcatgcccaacccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcagtataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTAAAACAGTTCCGta < 2:271914‑M2/66‑1 (MQ=255) gtatcatgcacaaaccagacgggttaacggcagcaaagaacctttcagagtcgttcgagcatgataacgaatggcatccgcatagtgcgctgggttatcgctcgcctcgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCGGTCGATAAAGTTATTCACCAAGATAATATCGAAATCCCGGCAGGTCTTTAAAACAGTTCCGtaataa < 2:298904‑M2/70‑1 (MQ=255) atcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTAAAACAGTTCCGTaataaat < 2:31759‑M2/72‑1 (MQ=255) ccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCGGTCGATAAAGTTATTCACAAGGATAATATCGAAATCCCGGCAGGTCTTTAAAACAGTTCCGTAATAAATATCCGGTTTCAt > 1:230674‑M2/168‑251 (MQ=255) ttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTAAAACAGTTCCGTAATAAATATCAGGTTTCATTCTTATATg > 1:171155‑M2/159‑251 (MQ=255) aTGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattga < 2:7334‑M1/251‑100 (MQ=255) agaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagggcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtcgggaaatataggggcaaatccaCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTAAAACAGTTCCGTAATAAATATCCGGTTTCATTCTTATATTCCAGCAATGGCAg < 2:180444‑M2/106‑1 (MQ=255) caATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctta < 1:194309‑M1/251‑107 (MQ=255) cgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTAAAACAGTTCCGTAATAAATATCCGGTTTCATTCTTATATGCCAGCAATGGCAGTGATTTGTTCATCCTTAAATCTGTCATGAgg < 1:247155‑M2/137‑1 (MQ=255) gaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTAAAACAGTTCCGTAATAAATATCCGGTTTCATTCTTATATGCCAGCAATTGCAGGGCTTTGTTCATCCTTAAATCTGTCATGAGGt > 2:218057‑M2/114‑251 (MQ=255) atccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTAAAACAGTTCCGTAATAAATATCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACa < 1:218057‑M2/145‑1 (MQ=255) gggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCGGTCGATAAAGTTATTc > 2:95441‑M2/91‑109 (MQ=255) gggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCCGGTCGATAAAGTTATTc < 1:95441‑M2/19‑1 (MQ=255) gCCAGCTGACATTGCAGTCAGTGTCCACAGGACAATGCAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTtagactggccccctgaatctccagacaaccactatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtattagggccggagaaacgcagacggcgtaccacacaggaaacgtccgcaattgttc > 2:65334‑M1/1‑93 (MQ=255) cAGTTGATATTGCAGGCAGTGTTCACAGGACAATGCAGGAGTGTATGACGGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTtaggctggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcag < 1:261933‑M1/251‑161 (MQ=255) tGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGGTACCCGGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgataggcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaatcgcagacggcgtaccacacaggaaaagatcgcaattgttcagcag < 1:18678‑M1/250‑164 (MQ=255) cagtGTTCACAGGACAATGCAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccgg > 1:67100‑M1/1‑75 (MQ=255) gcggcagcgtgcttgtaatgggttaagtgataacagatgtctggaaatatagggtcaaatccaCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTAAAACAGTTCCGTAATAAATATCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCTCTATTCCTGACGaa < 1:198675‑M2/185‑1 (MQ=255) ggcAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatgctagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggattacggtctccctc < 1:72650‑M1/250‑194 (MQ=255) ggcAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTGACCCGGTtagactggccccctgaatctccagacaaccaatatcacttaaataattgatagtcttaatactagtttttagactagtcattggagaacagatgattgatggcttagggccggagaaacgcagacggcgtaccgcacaggaaaagatcgcaattgtgcagcagatctttgaacctgggattacggtcaccctc < 2:53531‑M1/250‑194 (MQ=255) cAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTtagactggccccctgaatatccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctagt > 2:247743‑M1/1‑56 (MQ=255) gtatggatgaagcaaccgaacagaAAATTCCCGTTAACTGTTACCCGGTtagactggccccctgaatctccatacaaccaatatcacttaaataagtgatagtcttaattctagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctcccacgttgccca < 2:9190‑M1/240‑202 (MQ=255) tggaaatataggggcaaatccaCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTAAAACAGTTCCGTAATAAATATCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTACTGACGAACTGGCAACAAGGGAAGAAGGCGCTGTGGCTGTAGCCACCGCCAt > 2:209133‑M2/23‑251 (MQ=255) cTGTTACCCGGTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacggtctccctcgttgcccggcaacatggtgtagcagccagccagttatttctctggc > 1:11385‑M1/1‑12 (MQ=255) | TTACTGAAGATGCCATTAACAAGAGAAAACAAGAACGGGAGCTATTAAATAAAATATGCATTGTTTCAATGCTGGCTCGTTTACGTCTGATGCCAAAAGGATGTGCACAATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTAAAACAGTTCCGTAATAAATATCCGGTTTCATTCTTATATGCCAGCAATGGCAGGGATTTGTTCATCCTTAAATCTGTCATGAGGTTAAAACAAATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGCGCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGA > NC_000913/1649685‑1650175 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |