| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 487,341 | C→T | A269V (GCG→GTG) | mscK → | potassium dependent, small conductance mechanosensitive channel |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 487,341 | 0 | C | T | 97.1% | 106.2 / NA | 35 | A269V (GCG→GTG) | mscK | potassium dependent, small conductance mechanosensitive channel |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (12/22); total (13/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
GGGACTGATGTCGGCGAGACAGCCTTACGTCCCAGCCAGAAAGTGTTAATGCAGGCCCAGCAGGCGTTGCTGAATGCGGAGATTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGCGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTTGATGCAGCAAAACATTAAAGTCAAAAACTGGCTGGAGCGGGCGCTGCAATCGGAACGCAATATTAAAGAGCAGATTGCCGTCCTGAAGGGCAGCCTGCTGTTGTCTCGTATCCTT > NC_000913/487097‑487582 | gggACTGAGGTCGGCGAGACAGCCTTACGTCCCAGCCAGAAAGTGTTAATGCAGGCCCAGCAGGCGTTGCTGAATGCGGAGATTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAgg < 2:47660/250‑1 (MQ=255) gATGTCGGCGAGACAGCCTTACGTCCCAGCCAGAAAGTGTTAATGCAGGGCCAGCAGGCGTTGCTGAATGCGGAGATTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGAGTACGTGACGGCGAACAGCGCTCGTCTGGAGCGCCAGTTACAACTGTTGCAGGAAGCGGTAAGCAGCAAGCGCCTGG‑CATTAACCGAAAAAACGGTGCAGGAAGCCg < 2:227514/250‑1 (MQ=255) gTCGGCGAGACAGCCTTACGTCCCAGCCAGAAAGTGTTAATGCAGGCCCAGCAGGCGTTGCTGAATGCGGAGATTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGtctc < 2:69293/251‑1 (MQ=255) tACGTCCCAGCCAGAAAGTGTTAATGCAGGCCCAGCAGGCGTTGCTGAATGCGGAGATTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCcg < 2:70391/249‑1 (MQ=255) gTCCCAGCCAGAAAGTGATAATGCAGGCCAAGCAGGCGTTGCTGAATGCGGAGATTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAAAGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGt > 1:184622/1‑251 (MQ=255) gcccAGCCAGAAAGTGTTAATGCAGGCCCAGCAGGCGTTGCTGAATGCGGAGATTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCTCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTa < 1:41399/250‑1 (MQ=255) gAAAGTGTTAATGCAGGCCCAGCAGGCGTTGCTGAATGCGGAGCTTGCCCAGCAGCGTAAACGCATGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGC‑ATTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCCGGCt > 2:259025/1‑250 (MQ=255) ccAGCAGGCGTTGCTGAATGCGGAGATTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAA‑CGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGa < 1:215979/251‑1 (MQ=255) gcagGCGTTGCTGAATGCGGAGATTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCCGGATACCTTGCAACAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTACTCCGCTGGTGAAGCAGGAAc > 2:108666/1‑251 (MQ=255) cagGCGTTGCTGAATGCGGAGAGTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCGCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCTCTGGTGAAGCATGAACt < 2:17143/251‑1 (MQ=255) cGTTGCTGAATGCGGAGATTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGaa < 1:85253/251‑1 (MQ=255) gaTTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTa > 2:78912/1‑250 (MQ=255) aTTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAg < 2:73406/251‑1 (MQ=255) gACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCa < 1:203916/251‑1 (MQ=255) ccAGCAGAGTAAAAGCCTGGAAGGAAACACCGTCTTGCATGCTGCCTTGCAAAAGCAACTTGAGTACGGGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCC‑GAGCTTTAACGGAAAAAACGGTGCAGGAAGTCGTGTCCCCGGAGGAAGCCGCGCTTATTCAGTCTAAGCCGCTGTTGAGGCAGGAACTGGGAGTGATCCGGCAGTTAAGTCAGc < 2:110582/251‑1 (MQ=255) aaGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACcg < 1:44789/251‑1 (MQ=255) ggcaGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGCTTACGTGACGGCGAAAAGCCCTCGTCTCGAGCACCAGTTACAAATGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CATTATCGGAAAAAACGGTGCAGGAAGCCGTGTCCCCGGATGAGGCCGCGCGTATTCAGGCTAATCCGCTTGTGAAGCAGGAACTGGAAATTAACCAGCAAGTAAGTCAGCGTCTGATTCCCGCGGCTg > 1:22607/4‑251 (MQ=255) ggAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTg > 1:22597/1‑251 (MQ=255) gAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGATGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATCACCGCGACTGaaaa > 1:246883/1‑249 (MQ=255) aaCACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACgg > 1:71864/1‑251 (MQ=255) tGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGtt < 1:140171/250‑1 (MQ=255) aTACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTTGATgcag < 2:194214/251‑1 (MQ=255) ccTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCACGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTTGATg > 1:172511/1‑245 (MQ=255) ccTTGCAAAAGCAACGGGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATGACCGCGACTGAAAACGGTAATCAGTTGATg < 2:172511/245‑1 (MQ=255) cAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTGTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGTATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTTGATGCAGCAAAACATTAAAGt < 2:215403/251‑1 (MQ=255) gcgcTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTTGATGCAGCAAAACATTAAAGTCAAAAACTGGCTGGAGCGGGCGCTg < 2:71864/251‑1 (MQ=255) gtatGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGCGCAGGAAGCCGTCTCCACGGATGACGACGCGCGTATTCAGGCTAATCCGCTGGTGAAGCCGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGCCTGAAAACGGTCATCAGTTGATGCAGCAAATCATTACAGACAAACActgcctggggcacgcgccgcactcg > 2:5688/4‑234 (MQ=255) gTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTGGATGCAGCAAAACATTAAAGTCAAAAACGGGCTGGAGCGGGCGCTGCAATCGGAACGCAATATTa < 1:250089/251‑1 (MQ=255) ttACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTTGATGCAGCAAAACATTAAAGTCAAAAACTGGCTGGAGCGGGCGCTGCAATCGGAACGCaaaataa > 2:183674/1‑245 (MQ=255) cAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTTGATGCAGCAAAACATTAAAGTCAAAAACTGGCTGGAGCGGGCGCTGCAATCGGAACGCAATATTaa > 1:65835/1‑248 (MQ=255) ccTGA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTTGATGCAGCAAAACATTAAAGTCAAAAACTGGCTGGAGCGGGCGCTGCAATCGGAACGCAATATTAAAGAGCAGATTGCCGTCCTGAAGGGCAGCCTGCtgt < 1:108666/251‑1 (MQ=255) gA‑CTTTAACCGAAAAAACGTTGCCGCATGCCGTCTCGCCGGATGAAGCGGCGCGTATTCATGCTAATCCGCTGGGGAAGCAGGAACGGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGCTGATGCAGCAAAACATTAAAGTCAAAAACTGTCTGGAGCGGGCGCTGCAATCGGAACGCGATATGAAAGAGCAGATTCCCGTCCGGAAATTCAGCCTGCtgtt < 2:22607/249‑1 (MQ=255) gA‑CTTTAACCGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTTGATGCAGCAAAACATTAAAGTCAAAAACTGGCTGGAGCGGGCGCTGCAATCGGAACGCAATATTAAAGAGCAGATTGCCGTCCTGAAGTGCAGCCTGCtgtt < 2:22597/249‑1 (MQ=255) ccGAAAAAACGGTGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTTGATGCAGCAAAACATTAAAGTCAAAAACTGGCTGGAGCGGGCGCTGCAATCGGAACGCAATATTAAAGAGCAGATTGCCGTCCTGAAGGGCAGCCTGCTGTTGTCTCGTATc > 1:115952/1‑251 (MQ=255) aaaaaaCGGTGCAGGAAGCCGGCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTTGATGCAGCAAAACATTAAAGTCAAAAACTGGCTGGAGCGGGCGCTGCAATCGGAACGCAATAGTAAAGAGCAGATTGCAGTCCTGAAGTGCAGCCTGCTGTTGTCTCGTATCCtt < 2:220625/251‑1 (MQ=255) | GGGACTGATGTCGGCGAGACAGCCTTACGTCCCAGCCAGAAAGTGTTAATGCAGGCCCAGCAGGCGTTGCTGAATGCGGAGATTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGA‑CTTTAACCGAAAAAACGGCGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTTGATGCAGCAAAACATTAAAGTCAAAAACTGGCTGGAGCGGGCGCTGCAATCGGAACGCAATATTAAAGAGCAGATTGCCGTCCTGAAGGGCAGCCTGCTGTTGTCTCGTATCCTT > NC_000913/487097‑487582 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |