| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,172,941 | C→A | E342* (GAA→TAA) | mfd ← | transcription‑repair coupling factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,172,941 | 0 | C | A | 96.5% | 174.8 / NA | 57 | E342* (GAA→TAA) | mfd | transcription‑repair coupling factor |
| Reads supporting (aligned to +/- strand): ref base C (2/0); new base A (29/26); total (31/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AACGCCCACGGTCGCTGGCTTCATCAAGACGCATAATGCGTTGCGGAGCAATTTTAATTCGTGCGAGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTCAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAGGGAAATAACTGAACAGCGGCGGCAGTGGTTCGCTGAAGAACAAT > NC_000913/1172695‑1173179 | aaCGCCCACGGTCGCTGGCGTCATCAAGACGCATAATGCGGTGCGGAGCAATTTTAATTCGTTCGAGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACGTACGCAGCGCATCCAGCGGCGCCGTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGtt < 1:584745/251‑1 (MQ=255) ggCTTCATCAAGACGAATTATGCGTTGCGGAGCAATTTTAAGTCTTGCGAGCAGTGCACCCAGCGCTTCACGGCGACCTTCTCTTCCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTATGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCATTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCCCCCggg < 2:376719/251‑1 (MQ=255) tcatcaAGACGCATAATGCGTTGCGGAGCAATTTTAATTCGTGCGAGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGcc > 2:362872/1‑250 (MQ=255) catcaAGACGCATAATGCGTTGCGGAGCAATTTTAATTCGTGCGAGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCa < 1:193597/250‑1 (MQ=255) atcaAGACGCATAATCCGTTGCGGAGCAATTTTAATTCGTACGAGCAGTTCACCCAGCGCTTCACGGCGACATTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGCGGTACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAACTTGGACTTCGCGGCTTTTGTCGGGAATTGGTAAGGTTTTAGCTGCACCCGGGGccggt > 2:93285/1‑248 (MQ=255) caAGACGCATAATGCGTTGCGGAGCAATTTTAATTCGTGCGAGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGGCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGttt < 2:206114/251‑1 (MQ=255) cgcctaacgCGTTGCGGAGCAATTTTAATTCGTGCGAGCAGTTCACCCAGCGCTTCACGGCGACATTCCCTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCCGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCAGTCGCGGCTTTTGTCGGTAAATGTTCAGTTTTTAGCTGCCCCCGGGGCCAGTGTTTc > 1:523812/9‑249 (MQ=255) cGCATAATGCGTTGCGGAGCAATTTTAATTCGTGCGAGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTc > 1:523829/1‑249 (MQ=255) aTAATGCGTTGCGGAGCCATTAAAATTCGTGCAAGCCGATCTCCCAGAGCTTCAAGGCGACTTACACTTTCTACCGCGAACACCACCGGACCGTCGAAAGTCTCGAGGACCTTCCGCAGCGCATCCAGCGGCGCTTATTGTTGTGCCTGCACGGCCAGGACTGGCAGTTTCTGGAAACCTCAACTGGCGTTCGCGGCTTTGGTCGGTGAATGTTAAAGTTTGAACTGCACCCGGGGCCAGGTTTCCAGccc > 2:62525/1‑249 (MQ=255) tGCGTTGCGGAGCAATTTTAATTCGTGCGAGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTg > 1:556052/1‑249 (MQ=255) ggAGCAATTTTAATTCGTGCGAGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTc > 1:670477/1‑251 (MQ=255) cAATTTTAATTCGTGCGAGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGCAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTACCTGTTACGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGGGCTCGTcc > 2:607719/1‑251 (MQ=255) aaTTTTAATTCGTGCGAGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGACAGTCTCGAGGAACTTACGCAGCGCATCCAGAGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTcc > 1:697752/1‑250 (MQ=255) aaTTTTAATTCGTGCGAGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTccc > 1:389163/1‑250 (MQ=255) aaTTCGTGCGAGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCCCCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCa < 2:136566/251‑1 (MQ=255) aTTCGTGCGAGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTGCAGCTCTGAGAAGAGCTCGGCCACCCGCAg < 2:664185/251‑1 (MQ=255) aGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCCGGAACCCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGAACCAGGGGCCAGTTTTTCAGCTCTGAGAAGCGCTCGTCCACCCGCACCCAGcgcgg > 2:216701/1‑250 (MQ=255) cAGTTCACACAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGGCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCGGAGAAGAGCTCGGCCACCCGCAGCCAGAGCGAtt < 2:192290/251‑1 (MQ=255) ttCACCCAGCGCTTCACGGCGACCTTCCCTTTCTACCGAGAACACCACCGGACCGTCGAACGTCTCGAGGAACTTACGCAGCGCATCCCGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGGCGGTCAATGTTAAGCTTTTAGCTGCCCCCGGGGCCAGTTTTTCAGCCCTGAGCAGAGCTCGTCCACCCGCAGCCAGAGCGATtg > 2:366785/1‑249 (MQ=255) cccAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGtggtgg > 1:452883/1‑251 (MQ=255) cGGCGACTTTCACTTTCTCCCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCACCCAGAGCGATTGTGGTGGCAACAGCGGgcg > 2:240816/1‑251 (MQ=255) ggCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTTTGGTGGCAACAGCGGgcgc > 2:182104/1‑251 (MQ=255) cGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCAt > 1:84078/1‑251 (MQ=255) gACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCAACCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATc > 2:503390/1‑251 (MQ=255) tCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGa < 1:658394/249‑1 (MQ=255) cGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGAt < 1:368253/251‑1 (MQ=255) gagaACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGAtt > 2:151085/1‑251 (MQ=255) cGGACCGTCCAAACTCCAGAGGAAAGTACGCAGCGCCTCCAGCGACGCTTTTTGTTGTGCCTGAACGGCCAGCTCTGGCAGCTTCTGGCAACCTAACTTCGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAACAGCTCGTCCACCCCCCGCCAGAGCGATTGTGGTGGCAACCGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAAcgcg > 2:420037/1‑251 (MQ=255) ggACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGCAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTCAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGCTTCTCaaaccgagc > 2:368295/1‑245 (MQ=255) ccGTCGAAAGGCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGGAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCGCAAAACGCGCCAg < 2:576686/251‑1 (MQ=255) tCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCagag < 1:381251/188‑1 (MQ=255) tCGAAAGTCTAGAGGCACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGATTCTGGAACCCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTTAGAAGAGCTCGTCCACCCGCAGCCagag > 2:381251/1‑188 (MQ=255) cGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCTATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGGCAGCgtg < 2:623480/251‑1 (MQ=255) aGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTc > 1:215877/1‑249 (MQ=255) tACGCAGGGAATCCAGCGGCGATTTCTGTAGAGCCTGAAAGGCCAGGTCTGGCAGCTTCTGGAAAACTAAATTGGCATTAGCGGCTTTTGTCGGTCAATGTTAAGGTTTTAGATGCATCCAGGGCCAGTTTTTCAGCTCTGAGAGGAGCTCGTCCACACGCAGCCCGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCACGATTCTCAAAACGCGTCAGCTTGTCAGACTGGaaa > 2:690683/1‑245 (MQ=255) gcgcATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGGTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGTTTGTGGTGGCAACAGCGGGCGCATCTGATCGACGCCGCGATGCTCAAAACGCGCCAGCGTTTCAGCCTGGAAACGTTCGGCACTg < 2:371985/251‑1 (MQ=255) cgcATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCACAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTgg > 1:461803/1‑251 (MQ=255) ttttGTTGTTCCTGAACGGCCAGGTCTGGTAGTTTCTGGAAACCTAAAGTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCGGCACCCGGGGCCAGTGTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCa < 2:270261/249‑1 (MQ=255) gAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCa > 1:197921/1‑249 (MQ=255) gCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGGATTCACGAGCAAGGTAtt < 1:182104/251‑1 (MQ=255) ggTCTGGCAGTTTCTGGAACCCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGc > 1:230199/1‑250 (MQ=255) gTCTGGCAGTTTCTGGTAACCTAAATTGGCATTCGCGGCTTTTGGCGGTAAATGTTAAGTTTTTAGCTGCGCCCGGGGACAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAg < 2:523812/251‑1 (MQ=255) gTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAg < 2:523829/251‑1 (MQ=255) ggCAGTTTCTTGAAACCTAAATTGTCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTGTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCTATTGTGGTGGCAACAGCGGGCGCATCGGATCGATGCCGCGATTCTCAAAACGCGCTAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAgg < 1:294693/248‑1 (MQ=255) aGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGGGCACGGAATTGGCCGGGAAAt > 2:604071/1‑250 (MQ=255) aGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAGGGAAATa < 1:93285/251‑1 (MQ=255) gtaaaCCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGTTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTTGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAGTGAAATAACGGAAc < 2:129242/249‑1 (MQ=255) ggAAACCTAAAGTGGCAGTCGCGGCTTTTGGCGGTAAATGTGAAGGTGTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAGGGAAATAACTGaa < 2:556052/250‑1 (MQ=255) aCCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAGGGAAATAACTGAACAgcg < 1:362872/251‑1 (MQ=255) ccTAAATTGGCATTCGCAGCTTTCGTCGGCAAATGTTAAGTTTTTAGCTGCACACGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACACGCAGACAGAGCGCTTGTGGTGGCAAAAGCGGGCGCATCGGATCGACGACGCGCTTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCCAGAGCAAGGAATTGGCAGGGAAATAACTGAACAgcgg > 2:466476/1‑251 (MQ=255) ttGGCATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAGGGAAATAACTGAACAGCggcggc > 1:4238/1‑249 (MQ=255) cATTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTAAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAAAGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAGGGAAATAACTGAACAGCGGCGGCAGGGGt > 1:584859/1‑251 (MQ=255) aTTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAGGGAAATAACTGAACAGCGGCGGCCGTGGtt > 2:580827/1‑251 (MQ=255) aTTCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAGGGAAATAACTGAACAGCGGCGGCAGTGGtt < 1:505917/251‑1 (MQ=255) tCGCGGCTTTTGTCGGTAAATGTTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAGGGAAATAACTGAACAGCGGCGGCAGTGTTTc < 2:670477/250‑1 (MQ=255) tggTCGGTAAATGTTAAGTTTTTAGCGGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGGCCACCCGCAGCCAGAGCGATTGTGGGGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAGGGAAAGAACGGAATAGCGGCGGCAGTGGTTCGCTgaagaa < 2:461803/248‑1 (MQ=255) cGGTAAATGGTAAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCGCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGGATTCACGAGCAAGGTATTGGCAGGGAAATAACTGAACAGCGGCGGCAGTGGTTCGCTGAAGAACAAt < 1:607719/250‑1 (MQ=255) | AACGCCCACGGTCGCTGGCTTCATCAAGACGCATAATGCGTTGCGGAGCAATTTTAATTCGTGCGAGCAGTTCACCCAGCGCTTCACGGCGACCTTCACTTTCTACCGAGAACACCACCGGACCGTCGAAAGTCTCGAGGAACTTACGCAGCGCATCCAGCGGCGCTTTTTGTTGTGCCTGAACGGCCAGGTCTGGCAGTTTCTGGAAACCTAAATTGGCATTCGCGGCTTTTGTCGGTAAATGTTCAGTTTTTAGCTGCACCCGGGGCCAGTTTTTCAGCTCTGAGAAGAGCTCGTCCACCCGCAGCCAGAGCGATTGTGGTGGCAACAGCGGGCGCATCGGATCGACGCCGCGATTCTCAAAACGCGCCAGCGTGTCAGCCTGGAAACGTTCGGCACTGGTTTCCAGATCGCCAGTATTCACGAGCAAGGTATTGGCAGGGAAATAACTGAACAGCGGCGGCAGTGGTTCGCTGAAGAACAAT > NC_000913/1172695‑1173179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |