Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,556,2070TC28.2% 145.4 / 13.3 71S215G (AGT→GGT) rtcARNA 3'‑terminal phosphate cyclase
Reads supporting (aligned to +/- strand):  ref base T (48/3);  new base C (0/20);  total (48/23)
Fisher's exact test for biased strand distribution p-value = 7.86e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CCCGCGCCCGCCAGCGCCATCGGTAGCACCAGTTGGTCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATC  >  NC_000913/3555957‑3556453
                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                         
cccGCGCCCGCCAGCGCCATCGGTAGCACCAGTTGGTCCGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGCCTTCAAGCGCGACGGTCTTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCCTGCAGGGAAAAACt                                                                                                                                                                                                                                                           >  1:32422/1‑251 (MQ=255)
                             cAGTTGGTCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTc                                                                                                                                                                                                                              >  1:108157/1‑249 (MQ=255)
                                    tCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAACAAGCGTTCGGTGATATTTTCACTTTCGCCTTCAAGCGAGACGGTATTACCAGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATg                                                                                                                                                                                                                     >  2:642131/1‑251 (MQ=255)
                                        cAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGgcgc                                                                                                                                                                                                                 >  2:202636/1‑251 (MQ=255)
                                         aaGATATTCCCCCACCGCCTCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCACCTGTGCCGCACCCAACTCGGCACTGACGCGCTTTTCACCGACGACAAGACAGCGCTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAATGTACCGATTTCACGCTCAGCATCATGGcgcg                                                                                                                                                                                                                >  2:436763/1‑251 (MQ=255)
                                            cctcctaccccccgcccccgTGCTTGCCGGTGTGCTTTTCCCCTCTTCCCCCAACTGTCCCCAACCCCCCTCGCCACTGCCGCGTTTTTCACCGCCAAAAAAAAGGTGTTCGGTGATATTTTCCCTTTCGCCTTAAAGCGAGAGGTTATTCCCCGGCCCCGGGTCGCGCGGCAGTTTATAATTATTCTGTCCATGCAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCgg                                                                                                                                                                                                               <  2:548127/238‑1 (MQ=255)
                                                tCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGAGCGACACAcc                                                                                                                                                                                                        >  1:213964/1‑251 (MQ=255)
                                                      aCCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCgg                                                                                                                                                                                                               >  1:548127/1‑239 (MQ=255)
                                                      aCCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTa                                                                                                                                                                                                   >  1:170987/1‑250 (MQ=255)
                                                        cgccgccgTGCTTGCCAGGTAGCGTTTAACCTCTTTCACCAACTGCGACGCCACCACCTCGGCACTGCCGCGCTTTTCACCGACGACACAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCACCTGGTCGCGTGGCAGGTTATGAATATTCTGTTCATGAAGGGAAAAACTACCCGCCAGTGTAGCGATTTAACGCTCAGAAACATGGCGCGGCACACCAGCTAAt                                                                                                                                                                                                 >  2:407129/1‑250 (MQ=255)
                                                          ccgccgTGCTTGCCAGGTAGCGTCTCCCCCTTCACACCCACTGTCCCCCACCCGCCCCGGCACTGACGCTCTTTCCCCCGACGAAAAAAAAGCGTTGGGTGATTTTTTCTCTTCCGACTCAAAGCGAGAGGGTATCCCCCGGCCCCTGGTCGCCCGGCAGTTTATGAATTTTCTGTACAGGCAGGGAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGa                                                                                                                                                                                              <  1:160927/251‑1 (MQ=255)
                                                           cgccgTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCACGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTCATGCATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGa                                                                                                                                                                                              >  1:307299/1‑250 (MQ=255)
                                                              cgTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCCGCTAATAGAACtt                                                                                                                                                                                          >  2:15381/1‑251 (MQ=255)
                                                                  cTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTcc                                                                                                                                                                                      >  1:228233/1‑251 (MQ=255)
                                                                       cAGGTAGTGTTTCACCTCTTTCAACAACTGTGCCGCCACCACCTCGGCACTGACGCGCTTTTCACCGCAGACAAAAAAGCGATCGGTGATATTTTCACTTTCGCATTCACGCGAGACGGTATTACACGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAACACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCACCAAACCAGCTAATAGACCTTCTCCAccc                                                                                                                                                                                  >  2:51930/1‑248 (MQ=255)
                                                                        aGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCCGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGCTTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGCACTTCTCCACGCAt                                                                                                                                                                                >  1:362656/1‑251 (MQ=255)
                                                                        aGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCAt                                                                                                                                                                                >  1:61572/1‑251 (MQ=255)
                                                                               cGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATCTTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGcac                                                                                                                                                                          >  2:252761/1‑251 (MQ=255)
                                                                               cGTTTCACCTCTTCCACCAACTGTGCCTCACCCCCCCCGGCAGTGCCCCGCTTTTCACCGCCGAAAAAAAAGCGTTCGGTGATATTTTCACTTGCCACTTCAAGCGAGACGGTTTTCCCCGGCCCCGGGTCGGGCGGCAGGTTATAAATATTCTTTTCATGCATGGAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGcac                                                                                                                                                                          <  1:436846/251‑1 (MQ=255)
                                                                                 tttCCCCTCTTTCTCCAACGGGGCCGAAACCCCCCCGGCCCTGACCCTTTTTGCACCGACGAAAAAAAGGCGTGCGGTAATTTTTTCACTTTCGACTTCAAGCGAGACGTTATGCCCCGGCCCCGGTCCGCGCGGCGGGTTATGATTATTCTGTGCATGCAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGcaca                                                                                                                                                                         <  1:354321/250‑1 (MQ=255)
                                                                                       ctctTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTcc                                                                                                                                                                  >  1:176236/1‑251 (MQ=255)
                                                                                         ctTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCcg                                                                                                                                                                >  1:540157/1‑251 (MQ=255)
                                                                                             tCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGaa                                                                                                                                                                                             >  2:468550/1‑219 (MQ=255)
                                                                                                 cAACTGTGCCTCAACCACCACGCCACTGACGCGCATTTCACCGACGACAAAAAAGAGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGCCGGTATTACCCGGCCCCTGGACGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGATAATAGAACTTCTCCACGCATCTGCACCATGTTCCCGCGCTCGc                                                                                                                                                         >  2:461581/1‑251 (MQ=255)
                                                                                                 cAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGc                                                                                                                                                         >  2:147989/1‑251 (MQ=255)
                                                                                                            ccaccctccgcggcaccgccccgcTTTTCCCCGACGACAAAAAAGCGTTCGGTGATATTTCCCCTTCCGGCTCCAAGCGAAACGTTATCCCCCGGCCCCTGGGCGCGCGGCAGGTAAAGAATATCCTTTCCAGGCGGGGAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCaa                                                                                                                                               <  1:191109/230‑1 (MQ=255)
                                                                                                            cAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAACGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCa                                                                                                                                                >  2:339424/1‑249 (MQ=255)
                                                                                                             aaaccccccgggCAGTGACGCGTTTTCCCCCGACGAAAAAAAAGCGTGCGGGGATTTTTTCACTTCGGACTAAAAGGGGGAGGGTATTCCCCGGCCCCGGGCCGCGCGGAGGGTTAGGAATATTTTGTTCAGGAAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAg                                                                                                                                              <  1:599547/241‑1 (MQ=255)
                                                                                                               ccaccTCGGCCCTGCCTCGCTTTCCACCACCAAAAAAAAGGGGTTGGGTGATTTTTTCTCTTTCGACTCAAAGGGAGCTGGTATCCCCCGCCCCGTGGCCGCGGGGCGGGTTATAAATATTCTTTTCATGCAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGgtg                                                                                                                                           <  1:497304/251‑1 (MQ=255)
                                                                                                                   cTCGGCCCTGACGCGCTTTTCACCGACGACAAACCAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTa                                                                                                                                        >  2:131355/1‑250 (MQ=255)
                                                                                                                      cggactcgacgcccttccccccGACGACAAAAAGTCTTCCGGTGATATTTTCCCTTTCGTCTACAAGCGATGCGGTATCCCCCGGCCCCTGGTCCCGCGCCGGGTTATGAATATTCTGTTCAGGCAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAAc                                                                                                                                     <  2:455605/231‑1 (MQ=255)
                                                                                                                         cACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGAt                                                                                                                                  >  1:384122/1‑251 (MQ=255)
                                                                                                                             gccgcgctttccaccacaaaaaaaaaaGCTTTCGGTGTTATTTTCCCTTTCGCCTTCAAGCGAGCTGGTTTTCCCCGGCCCCTGGGCGCGGGGTGGGTTATAAATTTTCTGTTCATGCAGAAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCa                                                                                                                              <  2:228233/230‑1 (MQ=255)
                                                                                                                             gactcgcTTTTCCCCGAAAAAAAAAAAGCGTGCGGTGATATTTTCTCTTTCGCCTTAAAGCGAGATGGTATTCCCCGCCCCCTGGCCGCGCGGCAGTTTATAAATATTTTGTTCAGGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGc                                                                                                                                <  1:547881/245‑1 (MQ=255)
                                                                                                                                    ttttCATCGACGCCACAAAAGCGTTCGGTGCTATTTTCACTTTCGACTTCAAACGAGACGGTATTACCCGGCACCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCAAAGTTGCAAGGTGTTAAACGATGACACggccgt                                                                                                                       >  2:73805/1‑247 (MQ=255)
                                                                                                                                                     aaaGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGccacc                                                                                                       >  2:236667/1‑250 (MQ=255)
                                                                                                                                                               ggTGATTTTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCACTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCCCGGGCGAGACTTCCGTTGCCACCACACCGCCTc                                                                                             >  2:290076/1‑251 (MQ=255)
                                                                                                                                                                              ttCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCGAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAAc                                                                              >  1:227313/1‑251 (MQ=255)
                                                                                                                                                                                 gACTTCAAGCGAGCCGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTACCGCGCTCGCCAAGTTGAAAGGTGTTACACGATGCCACGGGCGAGACTTCCGTTGCCCACACACAGCCTCCGGCAGGGTAAAAACCGt                                                                           >  2:532339/1‑251 (MQ=255)
                                                                                                                                                                                  aCTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGCTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCACCATGGCGCGGCACACCCGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTg                                                                          >  2:670220/1‑251 (MQ=255)
                                                                                                                                                                                      cAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGt                                                                      >  1:7592/1‑251 (MQ=255)
                                                                                                                                                                                       aaGCGAGACGGTTTTCCCCGGCCCGGGTCCGCGCGGAAGGTTATGAATATTCTGTCCAGGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGGTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTa                                                                     <  1:252761/251‑1 (MQ=255)
                                                                                                                                                                                         gctaaccGGTATTCCCGTGCCCCGGGGCGCGCGGCAGTTTATGAATATTTTTTTCATCCAGAAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAAc                                                                   <  1:508774/245‑1 (MQ=255)
                                                                                                                                                                                           gagaCGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTcc                                                                                                                >  1:333973/1‑204 (MQ=255)
                                                                                                                                                                                           gagaCGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACcaca                                                                                                    >  1:503088/1‑216 (MQ=255)
                                                                                                                                                                                                  tATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGtt                                                          >  1:588076/1‑251 (MQ=255)
                                                                                                                                                                                                       cccGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCtg                                                     >  1:709120/1‑251 (MQ=255)
                                                                                                                                                                                                       cccGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCtg                                                     >  1:326196/1‑251 (MQ=255)
                                                                                                                                                                                                           cgCCCCTTGTCCGCGCGGCATTTTATGAATATTCGTATCATGCAGGAAAAATCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGTACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGGGGTTTGCtgat                                                   <  1:456932/250‑1 (MQ=255)
                                                                                                                                                                                                             ccccTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCtgatga                                                 >  1:114678/1‑250 (MQ=255)
                                                                                                                                                                                                                ggggTCGGGCGGCAGGTTATGAATATTCTGTTCAGGCAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTc                                             <  1:131355/249‑1 (MQ=255)
                                                                                                                                                                                                                        cgcgGCAGGTTATGAATATTCTGTCCAGGAAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTAtttt                                      <  1:43905/251‑1 (MQ=255)
                                                                                                                                                                                                                          cgGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGGGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGACCTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACCCCGCCTCCGGCAGGGTAAAACCCGTGGCGTAACAGCGCGGTTTGCTGATGAATTCCTATTTTCg                                    >  2:543187/1‑251 (MQ=255)
                                                                                                                                                                                                                           ggCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCg                                                                                                                        >  1:403217/1‑166 (MQ=255)
                                                                                                                                                                                                                           ggCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGc                                   >  1:155467/1‑251 (MQ=255)
                                                                                                                                                                                                                             cAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGccc                                 >  1:97540/1‑250 (MQ=255)
                                                                                                                                                                                                                              gggTTATGAATATTGTGTTCAGGCAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCcag                                <  1:593707/250‑1 (MQ=255)
                                                                                                                                                                                                                                gTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCcagc                               >  1:313371/1‑250 (MQ=255)
                                                                                                                                                                                                                                 ttATAAATATTCTTTGCATACAGGAAAAACCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCcagca                              <  1:436763/250‑1 (MQ=255)
                                                                                                                                                                                                                                    taaatattgggTTCATGCAGGAAAACCCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCg                           <  1:249843/240‑1 (MQ=255)
                                                                                                                                                                                                                                       aaattttcggttcaggaaggAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGc                         <  2:227313/233‑1 (MQ=255)
                                                                                                                                                                                                                                         atacttggtgtgtgcaggAAAAACCCCACCGCCAGTGTAGCGATTTCCCGCTCAGCAACATGGCGCGGCCCGCCATCTAACAGAACTTCGCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTGGCAATGTGTTAAACGATGCCACGGGCGAGACTGCCGTGGCCACCACGCCGCCTCCGGCATGGTAAAAGCCGTTGCGTAACAGCGTGGTTTGCTGATGAATTCCTAATTTCGCCAGCAGCGGCTc                       <  2:223702/235‑1 (MQ=255)
                                                                                                                                                                                                                                         atTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTcc                      >  1:583757/1‑250 (MQ=255)
                                                                                                                                                                                                                                              gTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCAcc                >  1:681416/1‑251 (MQ=255)
                                                                                                                                                                                                                                                  aaggCAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAAGAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGAGGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTGCGCCAGCAGCGGCTCCAGCACCcgg             <  2:709120/248‑1 (MQ=255)
                                                                                                                                                                                                                                                     gCAGGGACAACCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACCTGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGGAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCcggcgg          >  1:564128/1‑251 (MQ=255)
                                                                                                                                                                                                                                                       aGGGAAAAACTCCCCGCCAGTGTCGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGAt        >  1:203132/1‑251 (MQ=255)
                                                                                                                                                                                                                                                         ggAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATa       >  2:473418/1‑250 (MQ=255)
                                                                                                                                                                                                                                                         ggAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATa       <  1:642131/251‑1 (MQ=255)
                                                                                                                                                                                                                                                           aaaaaCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATaaa     >  1:437822/1‑250 (MQ=255)
                                                                                                                                                                                                                                                            aaaaCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCAACACATCTAATAGAACTTCTCAACGCACCTGCACAATGTTCCCGCGCTCGCCAAGTGGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCTCCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAAATCCTATTTTCGCCATCAGCGGCTCCAGCACCCGGCTGATAAAAt   <  2:213964/251‑1 (MQ=255)
                                                                                                                                                                                                                                                             aaaCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAAAATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTGCCGTTGCCACCACACCGCCTCCGGCAGGGTAAACAACGTGGCGTACCAACGTGGCTTGCTGATGACTTCCTATTTTCGCCAGCAGCGGCGCCAGCACCCGGCGGAGAAAATc  >  2:174897/1‑251 (MQ=255)
                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                         
CCCGCGCCCGCCAGCGCCATCGGTAGCACCAGTTGGTCAGCAAGATATTCCCCCACCGCCGCCGTGCTTGCCAGGTAGCGTTTCACCTCTTTCACCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTCGGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCCGGCCCCTGGTCGCGCGGCAGGTTATGAATATTCTGTTCATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCCGTTGCCACCACACCGCCTCCGGCAGGGTAAAAACCGTGGCGTAACAGCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATC  >  NC_000913/3555957‑3556453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: