| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,177,531 | 0 | A | C | 27.0% | 123.6 / 11.2 | 64 | V127G (GTG→GGG) | nudF | ADP‑sugar pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base A (35/11); new base C (0/17); total (35/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.12e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TATGCCCACTCATTTTTTAACGCTTGATGATGCAGCTGCAGCCATTGCAAAGCGATGACCGACGCTGCGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTG > NC_000913/3177282‑3177781 | tATGCCCTCTCATTTTTTAACGCTTGATGATGCAGCTGCAGCCATTGCAAAGCGATGACCGACGCTGCGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑Aaca < 2:512439/250‑1 (MQ=255)tATGCCCACTCATGTTTTAACGCTTGATGATGCAGCTGCAGCCATTGCAAAGCGATGATCGTCGCTGCGTTGTCGATTT‑CCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCTCATGAAC‑GCGAATATCTTCGTTTTCATCAGCCTGCCCGTGAAGACCGCTTGCGTTCGTGGCGTCCCCTTCCCCCGCCATAATTGACGAACGCTCACTGGAGCCCCCC‑GGGCTTGCCAGGAAACTT‑Aacac < 2:525886/250‑1 (MQ=255) cATTTTTTAACGCTTGATGATGCAGCTGCAGCCATTGCAAAGCGATGACCGACGCTGCGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCAGAAGTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTgg < 1:45676/249‑1 (MQ=255) aaCGCTTGATGATGCAGCTGCAGCCATTGCAAAGCGATGACCGACGCTGCGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGAc < 1:12604/251‑1 (MQ=255) aCGCTTGATGATGCAGCTGCAGCCATTGCAAAGCGATGATCGACGCTGCGTTGTCGATTTTCCCCTCTTCGACCCAC‑TTGTATGCCTTTTCCCGGCTTACCACATGAAC‑GCGAAGATCTGCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACGTCGACCACCATTATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGACCG‑TTTgtct < 2:158725/251‑4 (MQ=255) aCGCTTGATGATGCAGCTGCAGCCATTGCAAAGCGATGACCGACGCTGCGTTGTCGCTTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACt > 2:352400/1‑251 (MQ=255) aCGCTGGATGATGCAGCTGCAGCCATTGCAAAGCGATGACCGACGCTGCGGTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTGTTCATCAGCCAGACCGTGAATACCGCTTTCGGTCGTGGCGTCCACTTCGCCCGCCATAATTGACGAACGCTCACTGGTTCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACt < 1:80354/251‑1 (MQ=255) cTTGATGATGCAGCTGCAGCCATTGCAAAGCGATGACCGACGCTGCGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATc > 1:380398/1‑251 (MQ=255) gatgatGCAGCTGCAGCCATTGCAAAGCGATGACCGACGCTGCGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGt > 1:604685/1‑251 (MQ=255) tgatgCAGCTGCAGCCATTGCAAAGCGATGACCGACGCTGCGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTcc > 1:477899/1‑251 (MQ=255) gattctgctgaaccaaTTGAAAAGCGATGACCGACTCTGCGTTGTCGATTTTACCCTCTTCTACCCAC‑TGGTATTCCTGTTCCCGGCTTCCCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGTCCGTGAATACCGCTGGCTGTCGTGGCTTCCACTGCTCCCACCATAATTGACGAACTCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACAT‑AACTCCGGTTTGGTCCG‑TTTGACTATCAGTcc < 2:69553/235‑1 (MQ=255) tgcagctgcagcCATTGCAAAGCGATGACCGACGCTGCGTTGTCGCTTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTACCGc > 2:511945/1‑251 (MQ=255) cagctgcagcCATTGCAAAGCGATGACCGACGCTGCGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCct > 2:31444/1‑251 (MQ=255) agctgcagcCATTGCAAAGCGATGACCGACGCTGCGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGATTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCctc > 1:135297/1‑251 (MQ=255) ctgcagcCATTGCAAAGCGATGACCGACGCTGCGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCtt > 2:164049/1‑251 (MQ=255) cATTGCAAAGCGATGACCGACGCTGCGTTGTCGATTTTCCCTTCTTCTACCCAC‑TGGTATGCCTGTCCCCGGCTTACCACATGAAC‑GCGAATATCTTAGTTTTCATCAGCCAGACCCAGAATACCGCTTACGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGAGACCCCC‑GGGCTTCCCAGGAACCTT‑AACACCGGTTTGGTCAG‑TTTGACTATCAGTCCCGCCTCTTCAATCGc > 1:661263/1‑251 (MQ=255) tGCAAAGCGATGACCGCCGCTGCGTTGTCGATTTTCCCCTCTTCCCCCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTCCATCAGCCAGACCGTGAATCCCGCTTGCGGTCGGGGCGCCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACCCCGTTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCtt < 1:221470/250‑1 (MQ=255) aaaGCGATGCCCGCCGCTGGGTTGTTGTTTTCCCCCTCTCCTCCCCCC‑GGGTATGCCTGTTCCGGGCTTACCACATAACC‑GCGAATTTCTTCTTTTTCACCACCCAGCCCGGAAATCCCGCTGGCGGGCGGGGCCTCCCCTCCGCCCCCCAAAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGAAAACTA‑ACCCCCGGTTTGGCCCG‑TTTGACAAACAGCCCCGCCTCTTCAATCGCTTcgcg < 2:240614/251‑1 (MQ=255) ggCGATGACCGCCGCCGCGTTGTCGATTTTCCCCTCTTCTCCCCAT‑GGGTATCCCTGTTCCCGCCTAACCACTTGAAC‑GGGAATACCTGCGTTTACCCCAACCAGGCCGTGAATCCCGCTGGCGGTCTTGGCGTCCCCTTCGCCCACCATAACTACCAAACGCTCACTGGTCCCCCCC‑GGGCTATCCAGAAAACTT‑AACACCGGTTTGTTCCG‑TTTGCATATCAGTCCCGCCTCTTCAATCGCTTCGCGAc < 1:295689/250‑1 (MQ=255) gtGACCGACGCGGCGTTGTCGTTTTCCCCCTCTTC‑CCCCACCTGGTATGCCTGTTCCCGGTTTCCCACA‑GAACCGCAAATATCTTCGTTTTCACCAGCCAGCCGGTAAATCCCGTTTGCGGTCGTGGCGTCCCCTTCCCCCCCCATAATTGCCGAACCCCCCCTGGTCCCCCCC‑GGTTTGGCCAGAAAACTT‑AACCCCGTTTGGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGc < 1:199366/250‑1 (MQ=255) tGACCGACGCTGCGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGc > 2:130718/1‑250 (MQ=255) cGACGCTGCGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCACTCGCTTCGCGACGGGCAACAt > 2:365508/1‑251 (MQ=255) cGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCcacc > 1:319823/1‑250 (MQ=255) cGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCcac > 2:347945/1‑250 (MQ=255) ttttCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCAccc > 1:132717/1‑251 (MQ=255) cccccTTTTCCACCCCC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATCCCGCTTGCGGTCGTGGCGTCCACTTCCCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACCCCGGTTTGGTCCG‑TTTGACTATCACTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCctct < 1:246927/250‑1 (MQ=255) cttctACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATCTCCTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATCATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAACCTT‑AACACCGGTTTGGTACG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCACCATCTTCCACACTTTCACCCTCTTCAatc > 1:57577/1‑251 (MQ=255) ttctACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAatc > 1:221998/1‑250 (MQ=255) tctccccAC‑GGGTATCCCTGTTCCCGGCTTACCCCATGACC‑GCGAATATCTTCTTTTTCACCAGCCAGACCGTGAATCCCGCTTGCGGTCGGGGCGTCCACTCCGCCCACCATAATTGACGAACGCTCACTGGTCCCCCCC‑GGGCTTGCCAGAAAACTT‑AACCCCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAatca < 1:31444/246‑1 (MQ=255) cccggctcccctcaggtcc‑gcgAATTTCTCTGTTTTCACAAGCCACCCCGTGAACACCGCTCTCGGGCGTGCCGTCCCCGTCCCCCACCATAATGGACGACCGCTCTCTG‑TGCCCCCCCGGGCTTGCCAGGAAACGA‑AACCCCGGTTTGGTCTG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCTGCAACCATCTCCAGTAg < 2:379923/232‑1 (MQ=255) cacaTGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGttt > 1:505953/1‑251 (MQ=255) gAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGATTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGCACGCTCCCTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACAGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGTTTTCGCTg > 2:272551/1‑251 (MQ=255) aaC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACAATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGCCTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTgg > 1:664111/1‑251 (MQ=255) atatCTTCGTTTTCATCAGACAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCCACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGt > 2:43293/1‑250 (MQ=255) catcaGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCg > 1:522748/1‑250 (MQ=255) catcaGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCg > 2:543942/1‑250 (MQ=255) atcaGCCAGACCGTGAATAACGCTTGCGGTAGCGGCGTCCACTTCGCACACCATAATTGACGAACGCTCACTGGTCCCACCC‑GGGCTTGCCAGGAAACTT‑AACACCGCATTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCTACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGa > 1:620096/1‑250 (MQ=255) gCCAGACCGTGATTCCCGCTGGCGGTCGTGGCGTCCACTTCGCCCACAATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAACCTT‑AACCCCGGTTTGGCCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCAAACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTg < 1:325708/251‑1 (MQ=255) cgggAATCCCGCTTGCGGCCGTGCCGCCCACTCCCCCCACCATAATTGACGACCGCACACTGGTGCCCCCC‑GGGCTTCCCAGGAACCTT‑AACACCG‑TTTGGGCCGGTTTGACTATCATCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTGCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATc < 1:701921/248‑1 (MQ=255) cGTGAATACCGCTTGCGGTCGTGGCATCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCAAACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGACAAGGGGTTTCGCTGGTGTCGTACGCGGAAATCCGAATCTGCTCAATc > 2:651863/1‑251 (MQ=255) ggAATCCCGCTGGCGGCCGTGGCGCCCCCTCCGCCCCCCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAg < 1:130718/250‑1 (MQ=255) aTACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGcac > 1:550753/1‑251 (MQ=255) aCCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCg > 2:573303/1‑116 (MQ=255) aCCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCg < 1:573303/116‑1 (MQ=255) aCCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGcaca > 1:62406/1‑250 (MQ=255) gcttgggggcgggggtcccccTTCCCCCACCATAATTGACGAACGCCCCCTGGTCCCCCCC‑GGGCTTGCCAG‑AAACTTTAACCCCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACtt < 1:352400/231‑1 (MQ=255) tGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCATTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACACCTtcat > 2:541314/1‑251 (MQ=255) gCGGTCGTGGCGCCCCCTTCGCCCCCCATAATTGCCGACCGCTCCCTGGTCCCCCCC‑GGGCTTGCCAGGAACCTT‑ACCCCCGGTTTGGTCCG‑TTTGACTACCAGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTtcatc < 1:142162/251‑1 (MQ=255) cGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTCTCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCCCAACTtcatcc > 1:83484/1‑250 (MQ=255) gTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCAc > 1:557557/1‑251 (MQ=255) gTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCAc > 1:493882/1‑251 (MQ=255) ggCGCCCACTCCCCCCACCATAATTGCCGACCGCTCCCTGGTGCCCCCC‑GGGCTTGCCAGAAAACTA‑AACCCCGGTTTGGCCCG‑TTTGCCTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACt < 2:132717/250‑1 (MQ=255) ccACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTcc > 2:545340/1‑250 (MQ=255) ccccACTATAATTGACGAACGCTTCCTGGTGCCCCCT‑GTGCTTGCCAGGAAACTA‑AACCCCGGTTTGTTCGT‑TTTGCTTAACACTCCCGCCTCGTCAATCGCTTCGCGACGTGCAACAGCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCATGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAAACTGCTCGAACAGCACAACTTCAGCACGCACTGGGTCAAAGGGTa < 2:695137/250‑1 (MQ=255) cccaccaaaagcgACGAACTCTCACTGGTCCCCCCC‑GGGATTGCCAGGAAACTA‑AACCCCGGTTGGGTCCG‑TTGGACTATCAGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCAGCACGCACTGGGTCAAAGGGTAg < 2:135297/239‑1 (MQ=255) ccaccaTAATTGCCGACCCCTCACTGGCCCCCCCC‑GGGCTTTCCAGGAACCTT‑AACCCCGGTCTGGCCCG‑TTGGCCTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTCCATCACGCACTGGGTCAAAGGGTAGc < 2:319823/251‑1 (MQ=255) ccaccaTAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCACTCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATAAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGc > 2:626320/1‑251 (MQ=255) caTAATTGACGAACGCTCACTGGTCCCCCCC‑GGGCTTGCCAGAAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGa < 1:164049/251‑1 (MQ=255) aaatggccgacccctcactgtgccccccc‑GGGCTTCCCAGAAACCTT‑ACCACCGGTTGGGTCCG‑TTTGACTATCAGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACt < 1:117739/228‑1 (MQ=255) aacggacaaccgccctcggggccccccc‑GGGTTGGCCAGGAACCTA‑ACCACCGGTTTGGTCCG‑TTTGACTATCACTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAGCCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTg < 2:221998/229‑1 (MQ=255) tgccgaccGCTCACTGGTCCCCCCC‑GGGCTTGCCGGGAAACTT‑AACCCCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTGCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTgcg < 2:557557/243‑1 (MQ=255) gactaacgctctcggtgccccccc‑GGTCTGGCCAGGAACCTT‑ACCCCCTGTTTGGTCCG‑TTTGACTATCAGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTgcggc < 2:604685/233‑1 (MQ=255) gAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTg > 2:573919/1‑251 (MQ=255) ggagccccccc‑GGGCTGGCCAAGAAGCTA‑CACCACGGTTTGGGCCT‑TTGGACTAGCAGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAAGCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCTGCGTGACCGCGCTCa < 2:316317/246‑1 (MQ=255) cccc‑GGGCTTGCCAGGAACCTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAAttt > 2:97509/1‑251 (MQ=255) gCCAGGAAACTT‑ACCCCCGTTTTGGTCCG‑TTTGACTACCAGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCAc < 1:347945/251‑1 (MQ=255) acCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTg > 2:535201/1‑251 (MQ=255) acCGGTTTGGTCCG‑TTTGAATATCAGTCCCGCCTCTTCAATCGCTTCGAGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCCCAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTg > 2:444707/1‑251 (MQ=255) | TATGCCCACTCATTTTTTAACGCTTGATGATGCAGCTGCAGCCATTGCAAAGCGATGACCGACGCTGCGTTGTCGATTTTCCCCTCTTCTACCCAC‑TGGTATGCCTGTTCCCGGCTTACCACATGAAC‑GCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATTGACGAACGCTCACTGGTGCCCCCC‑GGGCTTGCCAGGAAACTT‑AACACCGGTTTGGTCCG‑TTTGACTATCAGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATCCGAATCTGCTCAATCAGCACAACTTCATCACGCACTGGGTCAAAGGGTAGCAAGACTGCGGCGTGACCGCGCTCAAAAATTTCCCGCCGCACCTCATGACTCATTTG > NC_000913/3177282‑3177781 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |