| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,878,947 | 0 | C | T | 27.4% | 102.4 / 16.8 | 63 | E276K (GAA→AAA) | cas1 | multifunctional nuclease Cas1 |
| Reads supporting (aligned to +/- strand): ref base C (13/32); new base T (16/1); total (30/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.68e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.68e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTATCTCAAAA‑GCTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTCCTGTATGCACAAACCCAATAGCTGGTGCATAACCAGCTGCAAGTATCGCCG > NC_000913/2878703‑2879195 | ccAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTT‑TATTTCTcccgc > 1:98706/1‑248 (MQ=255) gccAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATCCCCCTGCACGTACCTCCAACAACCAGATGGCTAAACTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCAGTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCa < 2:687032/250‑1 (MQ=255) aTTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGt < 1:241744/251‑1 (MQ=255) tttGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCCAGCACGTc > 1:289431/1‑251 (MQ=255) gTTCCCAGACCATTTCACGAAATTTTGCGGATACATCACCTACATATACCCCTGCACGTCCCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCACCATCCTCATTTCAGCTACGCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGTCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTTTCCAGCGGCAATCACGTCctc < 2:193215/251‑1 (MQ=255) ccAGATCATTTCACGAAGTATTGCGGATAGATCACCTACATATACCCCTGCACGTACCTGCAACAACCAGAGGGCTAAGCTGCCTCGGAAGCGCGGAGGTACAGTTGCAGTGACCACGACCAACATACTCATTTCAGCTACGCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGTCCGGCGGTTG‑TATTTCTCCAGCGTCAAGCGCGTACTCtatc < 2:37881/251‑2 (MQ=255) aGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGTCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAg < 1:345096/251‑1 (MQ=255) aGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAg < 1:206796/251‑1 (MQ=255) aaTTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTg < 2:351821/251‑1 (MQ=255) gATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAAGCTGCCTCTTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAATCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCTGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAAGTTGGCTAAT‑Gttt < 2:426131/251‑1 (MQ=255) tACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCCGCGGCAAGCACGTCCTCTATAAGCGGAATCACATTGTCTAAT‑Gttttt > 1:568417/1‑250 (MQ=255) cACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTTTCCACCGGCAAGGACGCCCCCTATACACGGGATCCATTTGGGTAAT‑GTTTTtctact > 2:444842/1‑251 (MQ=255) atatACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGAACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGGTG‑TATTTCTCCATCGGCAAGCACGACCTCTCTAAGCGGGATCCATTTGGCTAAT‑GTTTttctaactcgaaa > 2:22783/1‑242 (MQ=255) taCCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCCGCGGCCAACACGTCCTCTTTTAACGGGATCAATTTTGCTAAT‑GTTTTTCTACTGCGAAAAat > 1:606731/1‑250 (MQ=255) cccccAGCACGAACCTCCAACAACAAGATAGAGAATCTGCCTCGTAAGCGCGGGAGTACAATTTCAGTGACCACGACCAACAAACTCAATACCGCGACTCCGATGGCCTGCAGCTCCCACTGAAACAGGAAGCGGAATGGCAACAGACTGTGCAACTTCAGGTGGGGACGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAAGCAATTTGGCTAAT‑GTTCTACTACTGCGAAAAata‑t < 2:613115/250‑1 (MQ=255) gCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCt < 2:633100/249‑1 (MQ=255) gCACGTACCTCCAACAACCAGATGGCTAAGCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCTCGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGTCAATCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGc < 2:283404/251‑1 (MQ=255) cACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGAATCTTCAGGTGGGGCCGGCGGTTGGTATT‑CTCCCCAGGCAAGAACGTCCTCTTTAAGGGGGAAAAATTTGGCTTAT‑GTTTTATTAATGCGAAAAAAA‑TACCTGcc > 2:533776/1‑250 (MQ=255) aCGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCAc < 1:437069/251‑1 (MQ=255) tCCAACAACCAAATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTTTTCAACGGCAAGCAAGGCCTCTTTAAACGGAATCAATTTTGGTAAT‑GTTTTACTACTGCGAAAAAAA‑TACCTGCACGCCAAAc > 1:83969/1‑251 (MQ=255) ccAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACg < 1:154131/251‑1 (MQ=255) ccAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACg < 1:21197/251‑1 (MQ=255) caacCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACGCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTTCTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACt < 2:495001/251‑1 (MQ=255) caacCAGATGGCTAATCTGCCGCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACt < 2:107717/251‑1 (MQ=255) gCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTc < 1:68862/247‑1 (MQ=255) tCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAACGGCAAGCACGCCCCCTATAAACGGAATCCAATTGGCTAAT‑GTTTTATTACTGCGAAAAAAA‑TTCCATCACGCCAAACAGGCTTcctgggtcgggcccaccggg > 2:379930/1‑233 (MQ=255) tAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAACGGCAAGCACGTCCTCTTTAAGCGGAATCAATTTTGCTAAT‑GGTTTACTACTGCGAAAAATA‑TCCCCGCACGCCAAACGGACTTCCCCGTCC‑GGCTCACCAAGGtt > 1:556078/1‑250 (MQ=255) aaGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGAATCTTCAGGAGGGGCCGGCGGTTG‑TATTTCTCCAGCGGGAAGCCCCTCCTCCATAAACGGAATCAATTTGGCTAAT‑GTTTTACTACTTCGCAAAATA‑TCCCTGCCCGCCCAACGGACTTCCCCGTCC‑CGCTCACCCGGGGTac > 1:61355/1‑251 (MQ=255) gAGGTACATTTTCAGTGTCCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGAATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCCTCTTCAGGAGGGGCCGGCGGTTG‑TGTTTCTCCCGCGGCAACGAAGCCCTCTCTCAGCGGGATCTATTTTGCTAAT‑GTTTTACTCCTGCGCAAAATA‑TACCTGCAACCCAAACCGACTTTCCCGTCC‑GGcacccccggggtacaccgcgc > 2:297974/1‑231 (MQ=255) gTACATGTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTAt < 1:613997/251‑1 (MQ=255) tCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTA‑TATTTTTTCCGCGGCAAGCACGGACTCTTTTAGGGGAAACAATTTTGGTAAA‑ATTTTACTACTGCGAAAAATA‑TTCCTGCACGACAAACGGAATTTCCGGTCC‑GGCCCAACAAGGGTACGAAGCGCtcactccaaa > 1:682225/1‑241 (MQ=255) ccACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTATCTCAAAA‑GCTTTCgg < 1:49858/251‑1 (MQ=255) gACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTTTCCAGCGGCAAGCAAGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTTCTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGGTAAGCAGCGCTATCTCCAAA‑GCTTTCGGTac > 1:454229/1‑250 (MQ=255) aCCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TGTTTTTCCAGCGGGAAGCACGGCCTCTATAAGCGGAATCAATTTTGCTAAT‑GTTTTAATACTGGGGAAAATA‑TCCCTTCACCCCAAAAGGACTTCCCCGGCC‑CGCTCACCAGGGGTACGACGCGCCATCTCAAAA‑GCTTTCGGTaca > 2:613958/1‑250 (MQ=255) aCCAACATACTCATTTCAGCTACTCCGATGGCCCGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑ATTTTTTTCAGAGGCAAGCACGTCCTCTATAAAAGGAATCAATTTAGCTAAT‑GTTTTACTACTTCGAAAAATA‑TCCCTGCCAGCCCAACTGACTTTCCAGTCCTGGC‑CACCACGGTTACAGCCCCCTATCTCAAAA‑GCTTTCGGTaacc > 1:584978/1‑248 (MQ=255) aTACTCATTTCAGCTACGTCGATGGCCTGCATCTCCCAGGGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGTGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCGAAACGGACTTCCCGGTCC‑GGCGCACCAGGGTTACGACGCGCTATCTCAAAA‑GCGTTCGGTAAAACAgtgt < 2:79273/251‑1 (MQ=255) ttCAGCGACTCCGCTGCCCAGAATCTCCCAGTGAAGAAGGAGTCGGAATGGTACCAGGCTGTCCATCTTCAGGTGGTCTCGGCATTTG‑TATTTCTCCAGCTTCAAGCTCGTCTTCTATAAGCGGAACCAATTTGGCTAAT‑GTTTTAATATTGCGAAAAATA‑TCACTGCTCGCCAAACGTTCTTCCCGGCCC‑GGCTAACCAGGCTTACGACGCGCTATCTCGAAA‑GCTTTCGGTACAACAGTGTCAAAttt < 1:484881/250‑1 (MQ=255) cAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TGTTTTTCCAGCGGCAAGCACGTCCTCTATAAACGGGATCAATTTTGCTAAT‑GTTTTTATACTGCGAAAAATA‑TTCCTGCCCCCCAAACGGACTTTCCGGGCC‑GGCCCACCCGGGTTACGACCCGCTATTTCCAAA‑CCTTTCGGTACAACAGAGGCAAATTTAat > 1:64108/1‑251 (MQ=255) ccTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTATCTCAAAA‑GCTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATATc < 1:143998/251‑1 (MQ=255) ccTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGGGGGGCCGGCGGTTT‑GATTTTTCCAGCGGCCAGCCCGGCCTCTTTAAACGGGATCAATTTTGGTAATTGTTTT‑CTACTGCGGAAAAAA‑ACCCTGCACGCCCAAAGGACTTCCCGGGCC‑GGCCCCCCAGGGGTAACACGCGCCATCTCCAAA‑ACTTTTGGGTCAACAGGGTCCAATTTAAAGATGTCTGCAATATc > 2:209372/1‑251 (MQ=255) aTCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTTTCCAGCGGCAAGCACGTCCTCTATAAGCGGGATCAATTTGGGTAAT‑GTTTTTCTCCTGCGCAAAATA‑TCCCTGCACGCCCCACGGACTTCCCGGTCC‑GGCTCACCAGGGTTAACACCCGCTATCTCAAAA‑GCTTTTGGTGCAACAGTGTCAAATTTAATTATGTCTGCCATATCGTaa > 1:350482/1‑250 (MQ=255) aTCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGGGGGGCCGGCGGTTG‑TATTTCTCCAAAGGCAAACCCGTGCTCTTTAAACGGAATCAATTTGGCTAAT‑GTTTTACTACTGTGGAAAATA‑TCCCTGCACGCCAAACGGGATTCCCGGTCC‑GGCTAACCAGGGGTAACACGCGGCATCTCAAAAAGCTT‑CTGGACAACCGTGGCAAATTTTATAATTTCTGCGATATCGTaa > 1:128574/1‑250 (MQ=255) cccAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCGTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑GCCCTGCACGCCAAACTGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTATCTCAAAA‑GCTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATATCGTAAACa < 2:98706/249‑1 (MQ=255) cccAGTGAAACAGGAAGCGGAATGACAACAGGCTGTGCATCTGCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTTCTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GTCTCACCAGGGTTACGACGCGCTATCTCAAAA‑GCTCTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATATCGTAAACaaa < 1:377166/251‑1 (MQ=255) cAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATGTGGCTAAT‑GTTGTACTACTGCGAAAAATA‑TCCCTGCACGGCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTATCTCaaaa < 1:683502/196‑1 (MQ=255) aGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTTTCCCACGGCAAGCACGTCCTCTATAAACGGGATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGGCC‑GGCTCACCAGGGTTACGACGCGCTATCTCCAAA‑ACTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATATCGTAAACaaa > 1:129081/1‑248 (MQ=255) gAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTTTCCAGAGGGAAGCCCCTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTTCTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGGCC‑GGCTCACCAGGGGTACGGCGCGCCATCTCAAAA‑GCTTTCGGTCCAACCGTGTCAAATTTAATGATGTCTGCCATATCGTAAACAAAGGaaa > 1:465823/1‑250 (MQ=255) aaaCAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTTTCCCGCGGGAAGCACCGCCTCTATAAGCGGAATCAATTTTGCTAAT‑GTTTTACTCCTGCGAAAATAA‑TCCCTGCACGCCCAACGGACTTTCCCGTCC‑CGCTCACCCGGGTTACGACGCGCTATCTCAAAA‑GGTTTCGGTACAACAGTGTCCAATTTAATGATGTCTGCCatagacaaaacaaaagaa > 2:185305/1‑233 (MQ=255) aGGAAGCGGAATGGCAACAGGCTGTTCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTATCTCAAAA‑GCTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATAGCGTAAACAAAGGAAAGAGGCt < 1:599002/251‑1 (MQ=255) aGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTTTCCAGCGGCCAGCACGTCCTCTATAAACGGGATCAATTTGGCTAAT‑GTTTTTCTTCTGCGAAAAAAA‑ACCCTGGACGCCAAACGGGCTTCCCGGGCC‑GGCCCCCCAGGGTTTCGACGCGCTATCTCCCAA‑GCTTTCGGTACCACAGGGTCCAATTTAATTGTGTCTTCAATATTCTAAACAAAgggaaaagggt > 2:310855/1‑242 (MQ=255) aGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAACACGTCCTCTCTAAGCGGGATCAATTTGGCTAAT‑GTTTTTCTACTGCGAAAAATA‑TCCCTGCACGCCCAACGGACTTCCCGGTCC‑GGCTCACCCGGGTTACGACGCGCTATCTCAAAA‑GCTTTCGGTACAACAGTGTCAAATTTAAAGATGTCTGCCATATCCTAAAAAAAGGAAAGAgggt > 1:614076/1‑249 (MQ=255) aGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTATCTCAAAA‑GCTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTcc < 1:325829/251‑1 (MQ=255) gCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TCTTTTTCCAGCAGGAAGCCCGGTCTCTATAAGGGGGAACAAATTGGCTAAT‑GTTTTACTACTGCGGAAAATAATCCCT‑CCCCCCAAAACGACTTCCCCGTCC‑GGGTCCCCCGGGGTACGCAGCCCCTTCTCCACA‑ACTTTTGGTACACAAAAGTCAAATTTAATGATGTATGCACTAATGTAAACAAAGGaaaaggggttttct > 2:636526/1‑240 (MQ=255) gAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTATCTCaa < 1:491025/177‑1 (MQ=255) ggCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAACGGCAAGCACGTCCCCTATAAGCGGGATCAATTTGGCTAAA‑GTTTTTCTACTTCGAAAAATA‑TCCCTGCCCGCCCAACGGACTTCCCGGTCC‑CGCTCACCAGGGGTACGACGCCCCATCTCCAAA‑GCTTTCGGTACAACAATGGCAAATTTAATGATGTCTGCCATATCGTAAACAAAGGAAAAAAGCTTTCCttttttcc > 1:273424/1‑244 (MQ=255) gCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑AATTTTTCCACCGACAAACACATCCCCTTTAAGCGGGATCAATTTTGCCAAT‑GTTTTAATACTTCGAAAAAAA‑TCCCTTCACCCCAAAACGACTTCCCCGTCC‑GGCTCACCCAGGTTACGACCCCCTTTCTCAAAA‑ACTTTCGGTTCAACAGTGTCAAATTTTATGATTTCTTCAATATCTTTAACAAAGGAAAAATGCTTTCCTTTATGccc > 1:67742/1‑249 (MQ=255) gtgCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTATCTCAAAA‑GCTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTCCTGTATGCACAAACCCaa < 1:636526/249‑1 (MQ=255) gtgCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTATCTCAAAA‑GCTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTCCTGTATGCACAAACCCAAt < 1:379930/250‑1 (MQ=255) tCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTATCTCAAAA‑GCTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTCCTGTATGCACAAACCCAATAGCTg < 1:310855/247‑1 (MQ=255) tGGGGCCGGCGGTTG‑TTTTTTTCCCGCGGCAAGAACATCCTCTTTAAACGGAATCAATTTTGTTAAT‑GTTTTTCTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGGCTTCCCGGTCC‑GGCGCCCCAGGGGTACGACGCGCTATCTCACAA‑GATTTTGGGACAAAAATGGCAAAATTAATGATTTCTGCAATATCGTAAAAAAAGGAAAGAGGCATTCCTGTATGCACAAACCCAAAAGCGGGTGCAAAAc > 2:285346/1‑251 (MQ=255) ccGGCGGTTG‑TATTGCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCTCGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACgcgc < 1:337645/136‑1 (MQ=255) gaggTTG‑TATTTATCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GATTTACTACTGCGAAACATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCA‑GGCTCACCAGGGTTACGACGCGCTATCTCAAAA‑GCTTTCGGTACAACAGTGACAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCGTTCCTATATGCACAAACCAAATAGCTGGAGCATAACCAGCTGc > 2:578263/3‑250 (MQ=255) gTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTATCTCAAAA‑GCTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTCCTGTATGCACAAACCCAATAGCTGGTGCATAACCAGCTGCAAGt < 2:350482/251‑1 (MQ=255) tctcCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTATCTCAAAA‑GCTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTCCTGTATGCACAAACCCAATAGCTGGTGCATAACCAGCTGCAAGTATcgccg < 1:41706/250‑1 (MQ=255) | CCAGTCCAGCTATTTGTTCCCAGATCATTTCACGAATTTTTGCGGATACATCACCTACATATACCCCTGCACGTACCTCCAACAACCAGATGGCTAATCTGCCTCGTAAGCGCGGAGGTACATTTTCAGTGACCACGACCAACATACTCATTTCAGCTACTCCGATGGCCTGCATCTCCCAGTGAAACAGGAAGCGGAATGGCAACAGGCTGTGCATCTTCAGGTGGGGCCGGCGGTTG‑TATTTCTCCAGCGGCAAGCACGTCCTCTATAAGCGGAATCAATTTGGCTAAT‑GTTTTACTACTGCGAAAAATA‑TCCCTGCACGCCAAACGGACTTCCCGGTCC‑GGCTCACCAGGGTTACGACGCGCTATCTCAAAA‑GCTTTCGGTACAACAGTGTCAAATTTAATGATGTCTGCAATATCGTAAACAAAGGAAAGAGGCTTTCCTGTATGCACAAACCCAATAGCTGGTGCATAACCAGCTGCAAGTATCGCCG > NC_000913/2878703‑2879195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |