Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	577,820	IS2 (–) +5 bp	coding (208‑212/498 nt)	rrrD →	lysozyme

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 382590	NA (NA)	54 (0.770)	50/490	0.4	93.0%	noncoding (1331/1331 nt)	IS2	repeat region
	?	NC_000913	= 577824	4 (0.060)					coding (212/498 nt)	rrrD	lysozyme
*	?	NC_000913	577820 =	0 (0.000)	50 (0.720)	45/488	0.5	100%	coding (208/498 nt)	rrrD	lysozyme
	?	NC_000913	= 1469240	NA (NA)					noncoding (1/1331 nt)	IS2	repeat region

CATCAGGCCTTTCCATTGCTTACCGCCAGCGTATGTCCAGCGACGCAGCTGATCACATGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/578062‑577820 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAA  <  NC_000913/1469240‑1468998                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CATCAGGCCTTTCCATTGCTTACCGCCCGCGCATGTCCAGCGACGAAGCTGATCACACGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGCAGCGTCGCTGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCAGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCACGTGTGCTTTGCATTCTAGACTGG                                                                                                                                                                                                                                             >  2:704261/1‑251         CTTTCCATTGCTTACCGCCAGCGTATGTCCAGCGCAGCAGCTGATCACATGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGAGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGAAAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTG                                                                                                                                                                                                                                      >  2:617076/1‑250                TTGCTTACCGCCAGCGTATGTCCAGCGACGCAGCTGATCACATGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCC                                                                                                                                                                                                                               >  2:379475/1‑250                      ACCGCCAGCGTATGTCCAGCGACGCAGCTGATCACATGCGCCTTTG‑ATATCGCCCTTGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCAGTCTAGACTGGCCCCCTTAATCTCCAGACAAC                                                                                                                                                                                                                        <  1:204237/251‑1                      ACCGCCAGCGTAGGGCCAGCGACGCAGCTGATCACATGCGC‑TTTGTATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCATCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAAGTTGTCTTGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCGTTGCATTCTATTCTGTCCCCCTGAATCTCCggtcaac                                                                                                                                                                                                                        <  2:489630/251‑8                       CCGCCAGCGTATGTCCAGCGACGCAGCTGATCACATGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACC                                                                                                                                                                                                                       >  1:400230/1‑251                       CCGCCAGCGTATGTCCAGCGACGCAGCTGATCACATGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACC                                                                                                                                                                                                                       >  1:274990/1‑251                          CCAGCGTATATCCAGCGAAGAAGCTGATCACATGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTAAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCGGAAAACCAAT                                                                                                                                                                                                                    >  2:467520/1‑251                                 ATGTCCAGCGACGCAGCTGATCACATGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTT                                                                                                                                                                                                             <  1:373313/251‑1                                      CAGCGACGCAGCTGATCACATGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACGGGCCCCCTGAATCTCCAGACAACCAATATCACGTAAATA                                                                                                                                                                                                        <  2:268802/251‑1                                         CGACGCAGCTGATCACATGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCAACCACGTTGTAAACGACTGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGCCTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCCATTAAATAAGg                                                                                                                                                                                                     >  1:120377/1‑250                                          GACGCAGCTGATCACATGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTG                                                                                                                                                                                                    >  1:224262/1‑251                                              CAGCTGATCACATGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGAT                                                                                                                                                                                                  >  1:305554/1‑249                                                         ATGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATA                                                                                                                                                                                                 <  2:103386/239‑1                                                         ATGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATA                                                                                                                                                                                                 >  1:103386/1‑239                                                              CCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTT                                                                                                                                                                                >  1:282482/1‑251                                                              CCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTT                                                                                                                                                                                >  1:336672/1‑251                                                                          GCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCt                                                                                                                                                                     >  1:670484/1‑250                                                                            CCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATT                                                                                                                                                                   >  1:205883/1‑251                                                                            CCTGGTTTATTTTGCGAAGAAGCGTCGATGGTCTAAAATTGCCAGCGCCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCTCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGTCAAGTTCTTTATTCAAGAGTGCTTTGCATTCTAGACTTGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGGTTTTAGACTAGTCATT                                                                                                                                                                   <  2:433368/251‑1                                                                              TGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGG                                                                                                                                                                 >  1:674786/1‑251                                                                                   TATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGACTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTACTACTAGTTTTTAGACTAGTCATTGGAGAAC                                                                                                                                                            >  1:444891/1‑251                                                                                   TATTTTGCGAAGAAGCGTAGATGGTCTAAAATGGCCAGCACCCACGGTGGAAACGAATGAGTAAAGAGCGCCGCGCGTTGTGTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCGAGACTGGCCCCCTGAATCTCCAGATAACCAATATCGCTTAAATAAGTGATAGTCTTAATGCTAGTTTTTAGACTATTCTGTGGAGAA                                                                                                                                                             <  2:84537/250‑1                                                                                      TTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCTCCGCTCGTTTTTTCCTGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGATAGTGGCAAGGTCTTTATTCAAGATTGCTTTGCAGTCTAGACTGGCCCCCTGAATCTGCAGTCAACCAATATCTCTTAAATAAGTGATAGTCTTAATACGAGTGATTAGGTTAGTCATTctggaacag                                                                                                                                                          <  2:289864/250‑10                                                                                       TTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGA                                                                                                                                                         <  1:96436/250‑1                                                                                            AAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTG                                                                                                                                                   <  1:379475/251‑1                                                                                            AAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTG                                                                                                                                                   <  1:169528/251‑1                                                                                             AGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTG                                                                                                                                                   >  2:88367/1‑250                                                                                              GAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCTCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCGGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTTAATCTCCAGACAACCAATAGCACTTAAATAAGTGATAGTCTTAATACTAGGTTTTAGACTAGTCATTGGAGAACAGATGATTGAT                                                                                                                                                 <  1:644305/251‑1                                                                                                                    GCCAGCACCCACGTTGGAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGTCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCGTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCA                                                                                                                           <  1:644703/251‑1                                                                                                                            CCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGGATATCGACTTTGATATACGGGTTAATTTGTCTGGCGCCAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGT                                                                                                                   >  1:465526/1‑251                                                                                                                             CACGTTGTAAACGAATGAGTAACCAGAGCCGCGCGAAGTTTCAGGTATATCGACGTTGATATACGGGCTAATTTGTCTCGCGACAGTGGCAAGGACTTTATTCAAGCGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGCCAACAAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGCTGTCTTAGGTACGGAGAAACACAGACGACGT                                                                                                                   >  2:448718/1‑250                                                                                                                                   GTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACA                                                                                                             <  1:494699/250‑1                                                                                                                                               GTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGAGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGCATCTCCAGACAACCAATATCACTTAAATAAGTGATCGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAA                                                                                                      >  2:684213/1‑245                                                                                                                                                    GAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATT                                                                                           >  1:207237/1‑251                                                                                                                                                    GAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATT                                                                                           <  1:684213/251‑1                                                                                                                                                                  GTTTCCGCTATCTCGACTTTGCTATACGGGTTAATTTGTCTGGCGAAAGTGGCACGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGCATCTCCAGACAACCCATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGCGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCCCACAGGAAAAGGTCGCAAATGTTCAGCAGAGCTT                                                                             >  2:644545/1‑251                                                                                                                                                                    TTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGAGTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTT                                                                            <  2:225573/250‑1                                                                                                                                                                                      GATATAAGGGTTAATTTGTCTGGCGCCAGTGTCAAGGTTTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCACCCTGAATCTCCTGACAACCCATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCTTTGGAGAAAAGATGATTGCTGTCTTAGGGCCGGAGAAACTCAGACGTCGTACCACACAGGAAAAGATTGAAATTGGTCAGCAGAGCTTTGACCCGAGGATGACtttct                                                         >  2:456393/1‑246                                                                                                                                                                                         ATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAAGATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCC                                                       <  1:492589/250‑1                                                                                                                                                                                              gtgTAATTTGTCTGGCGACAGTTGCAAGGTCTGTATTCAAGAGTTCTTTTCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTGAAATAAGTGATAGTCTTAATACTAGTTGTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAATCGCAGACGGCGTAGCACACAGGAAAAGATGGCGATTGTTCAGCGGGGTTTTGAACCGGGGATGACGGTCTCCTTCGTT                                                 <  2:674786/248‑1                                                                                                                                                                                                 TAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTTTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGC                                               <  2:707967/250‑1                                                                                                                                                                                                    TTTGTATGGCGACAGAGGCAAGGTCTTTACTAAAGAGTGCTTTGCATTCTAGCATGGCCCCCTGACTCTCCAGACAACCAATATCACTTAAATAAGAGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTAAGCAGAGCTTTGAACCGGGGATGACGGTATCCCTCGTTGCCCGG                                           >  2:684933/1‑251                                                                                                                                                                                                     TTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGG                                           <  2:568825/250‑1                                                                                                                                                                                                              GACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATAGCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGAGCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTG                                 <  2:560186/251‑1                                                                                                                                                                                                                    GGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCA                            <  1:210356/250‑1                                                                                                                                                                                                                    GGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGC                             >  2:219822/1‑249                                                                                                                                                                                                                              TTATTCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACGTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCA                    <  2:401630/248‑1                                                                                                                                                                                                                                  TCAAGAGTGCTTTGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTT             >  1:380760/1‑251                                                                                                                                                                                                                                              TGCATTCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAA  <  1:450474/250‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CATCAGGCCTTTCCATTGCTTACCGCCAGCGTATGTCCAGCGACGCAGCTGATCACATGCGCCTTTG‑ATATCGCCCTGGTTTATTTTGCGAAGAAGCGTCGATGTTCTAAAATTGCCAGCACCCACGTTGTAAACGAATGAGTAAAGAGCGCCGCGCGTTGTTTCCGGTATATCGACTTTGATATACGGGTTAATTTGTCTGGCGACAGTGGCAAGGTCTTTATTCAAGAGTGCTTTGCATTCt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/578062‑577820 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAA  <  NC_000913/1469240‑1468998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.