Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,302,233	IS1 (–) +8 bp	coding (1052‑1059/1632 nt)	oppA →	oligopeptide ABC transporter periplasmic binding protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	257908 =	NA (NA)	57 (0.810)	50/490	0.4	100%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	= 1302240	0 (0.000)					coding (1059/1632 nt)	oppA	oligopeptide ABC transporter periplasmic binding protein
*	?	NC_000913	= 258675	NA (NA)	48 (0.690)	48/490	0.4	100%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	1302233 =	0 (0.000)					coding (1052/1632 nt)	oppA	oligopeptide ABC transporter periplasmic binding protein

CCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/258153‑257908 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAAGTGCACAGGTATGGATCAACGTGAACTTCGTCCGGGATCTCTTTTTTCAGCTTCTGGAACAA‑TTCGATCGGCATGCTGTTA  <  NC_000913/1302240‑1301994                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATT                                                                                                                                                                                                                                                     <  1:577437/251‑1               GATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTA                                                                                                                                                                                                                                       <  1:143827/251‑1                  atttcTGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGCAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACCAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTGGGAGTCATTACCCAATTTTGCGCCATCAGTATA                                                                                                                                                                                                                                     >  2:275648/6‑250                     GATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCAGTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGT                                                                                                                                                                                                                                 <  1:107342/251‑1                      ATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTG                                                                                                                                                                                                                                <  1:389220/251‑1                                   GGCCGCTGTATGAAGCCCGCCGGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAAGCGGTGGATCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGGTTGAGTCATAGCCCAATTTTGCGCCATCATGATACGGTGGAGTGTAACCAT                                                                                                                                                                                                                    <  2:703722/250‑1                                                   CCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCC                                                                                                                                                                                                   >  1:202004/1‑251                                                          AAGGGAAAGCTGCACGTAATCAGCAAGCGCTATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCCCCTGGCTCGGCTGGGGCGGAAGTCGCTGTCGTTCTCAACATCGGTGGAGCTGCATGACACTGTCATCGGGCATTATCTGAACATAAAACACTATCCATAAGTTGGCGTCATTACCCAATTTTGCGCCCTCAGTATACGGTGGGGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTT                                                                                                                                                                                            >  1:421897/1‑251                                                          AAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTT                                                                                                                                                                                            <  2:151663/251‑1                                                          AAGGGAAAGCTGAAAGTATTCAGCAAGCGATATACGCAGCGAATTGAACGGCATCACCTGAATCTGAGGCCGCACCTGGCACGGATGGGCCGGAAGTCGCTGCCGTTCTCAAAATAGGTGGAGATGCATGACAACGCCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGCGTGTAACCATAGGCGGGCATGGTGCCCCGCGCTT                                                                                                                                                                                            >  2:265633/1‑251                                                           AGGGAAAGCATCACGTAATCAGCAAGCTATATACGCAGCGACTTGAGCGGCATAACCGGAATCTGAGGCAGCACCTGGCACGGCTGAGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTGCCCATTGTTGTGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGGATGGGTCCCTGCGCTTc                                                                                                                                                                                           <  2:375380/251‑2                                                             GGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGG                                                                                                                                                                                                              >  2:561526/1‑230                                                             GGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGG                                                                                                                                                                                                              <  1:561526/230‑1                                                                AAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTT                                                                                                                                                                                      <  1:702750/251‑1                                                                    tgcacgtcctccgcaagagaccTACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCCAAATCGGTGGAGCTGCATGACAACGTCATCGGGCATTATCTGCACATAAAACACTATCAATAAGTTGGAGTCATTACCAAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATCGGCGGACCTGTTGCCCCGGGGTTTCACTTTATT                                                                                                                                                                                  >  2:371168/23‑251                                                                    TGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGCATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAACTCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGGACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGGGTAACCATAGGCGGGCATGTTGCACCACGCTTTCACTTTATT                                                                                                                                                                                  >  2:285481/1‑251                                                                              CAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATA                                                                                                                                                                        <  1:512762/251‑1                                                                               AGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATAT                                                                                                                                                                       >  2:373621/1‑251                                                                                     CGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGT                                                                                                                                                                 <  2:221313/251‑1                                                                                     CGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGGGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGAATTCGCGGT                                                                                                                                                                 >  1:45711/1‑251                                                                                                  GAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTT                                                                                                                                                    >  1:123897/1‑251                                                                                                        AGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAATCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTCTCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTTACTTTATTAACAATGCTATCGCGGTCCATACCCTGTTTCAatgg                                                                                                                                              >  2:118628/1‑247                                                                                                                           GAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCG                                                                                                                           <  2:203251/251‑1                                                                                                                           GAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCAGTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTCCGCACACGCGCATCG                                                                                                                           <  2:587548/251‑1                                                                                                                            AGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACACAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGAGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCCCATCGT                                                                                                                          >  1:299045/1‑251                                                                                                                                  CACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATG                                                                                                                    <  2:30111/251‑1                                                                                                                                     CTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCCTACCTAGTTTCAGTGCGGTACGAACCCGCACATCGTTGAATGGCG                                                                                                                 >  1:338435/1‑251                                                                                                                                        GCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGAGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTT                                                                                                              >  1:321773/1‑251                                                                                                                                        GCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATGATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACGTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTT                                                                                                              <  1:94139/251‑1                                                                                                                                         CACGTCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCGTCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACGATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCAGACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTT                                                                                                             <  2:282384/251‑1                                                                                                                                          ACGGCTGGGACGGAAGGCGCTGTCGGTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGATGGAGTCATTACCCAAGTTTGCGCCAGCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTC                                                                                                            <  2:528115/251‑1                                                                                                                                               TGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTTTGGTT                                                                                                       >  2:698615/1‑251                                                                                                                                                    CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTCTGGTTGTTAA                                                                                                  <  1:163469/251‑1                                                                                                                                                                       CAAAATCGGTGGAGCTGCATGACAAAGTCATCTGGTATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCAGCAGTATACGGTGGAGTGTAACCAGAGGCGGGCATGTTGCCCTGCGCTTTCACGTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGTTACGCACACGCACATTGTTGAATGGCGTTTTCTGGTTGTTAATTTCGTAATAGGAAGTGC                                                                                <  2:579356/250‑1                                                                                                                                                                       CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGTCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAAGTGC                                                                                <  1:285481/250‑1                                                                                                                                                                        AAAATCGGTGGAGCTGCATGACACAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCCCATCGTTGAATGGCGGTTTTTGGGTTTTTATTTTGTAATAATAATTGCcc                                                                              >  2:167734/1‑249                                                                                                                                                                         AAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAAGTGCAC                                                                              >  1:580818/1‑250                                                                                                                                                                              ggtagatCTGCATGACAAAGTCATCGGGCGTTATTTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATGTTGCGCCATCAGTATACGGTGTAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTCATTAACAATGATATCGCGGTCCATACCTGGTTTCAGTGCGTTTCGCACACGCACATCGGTGAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAAGTGCACAGGTAT                                                                        <  2:439408/244‑1                                                                                                                                                                                 GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGATTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTC                                                                                                                                                                <  1:666205/160‑1                                                                                                                                                                                   AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAAGTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAAGTGCACAGGTATGGATC                                                                   <  1:373621/251‑1                                                                                                                                                                                         ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGGGTCTGGTTGTTAATTTCGTATAAGTTAGTGCACAGGGAGTGATCAACGTG                                                             >  2:108750/1‑251                                                                                                                                                                                                  TCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTG                                                                                                                        <  2:500656/183‑1                                                                                                                                                                                                  TCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTG                                                                                                                        >  1:500656/1‑183                                                                                                                                                                                                   CATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAAGTGCACAGGTATGGATCAACGTGAACTTCGTCC                                                   >  1:56454/1‑251                                                                                                                                                                                                      CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGTAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTTTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAAGTGCACAGGTATGGATCAACGTTAACTTCGTCCGG                                                 <  1:451923/250‑1                                                                                                                                                                                                       GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCTCTTTCACTTTATTAACAATGATATCGCGGTCCATGCCTAGTTTCAGTGCGGTACGCACACGCACATCTTTTAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAAGTGCACAGGTATGGATCAACGTGAACTTCGTCCGGGA                                               <  1:371168/251‑1                                                                                                                                                                                                                      ATAAAACACGATCAATAATTTGGAGTCATGTCCCTATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCATGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTTCGGTACGCACACGCACATCGTTGAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAATGGCACAGGTATGGATCAACGTGAACTTCCTCCcccccccccccttccagct                                <  1:275648/251‑20                                                                                                                                                                                                                       TAAAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAAGTGCACAGGTATGGGTCAACGGGAACTTCGTCCGGGGTCTCTTTTTTCAGCTT                               >  1:54077/1‑251                                                                                                                                                                                                                         AAACACTATCAATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGGTTCTGGGTGTTAATTTCGTAATAGTAAGTGCACAGGGATGGATCAACGTGAACTTCGTCCGGGGTCTCTTTTTTtaactttt                             >  1:531052/1‑243                                                                                                                                                                                                                                   AATAAGGTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTTGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACTCACACGCACATCGTTGAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAAGTGCACAGGTATGGATCAACGTGAACTTCGGCCGGGATCTCTTGTTTCAGCTTCTGGAACAA‑TTC                  <  1:671412/251‑1                                                                                                                                                                                                                                    ATAAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAAGTGCACAGGTATGGATCAACGTGAACTTCGTCCGGGATCTCTTTTTTCAGCTTCTGGAACAA‑TTCG                 <  2:580818/251‑1                                                                                                                                                                                                                                      AAGTTGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAAGTGCCCAGGTATGGATCAACGGGGAATTCGTCCGGGATCTCTTTTTTCAGCTTCTGGAACAA‑TTCGAT               >  1:219557/1‑251                                                                                                                                                                                                                                          TGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTT                                                                                                                         >  2:8205/1‑142                                                                                                                                                                                                                                          TGGAGTCATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTT                                                                                                                         <  1:8205/142‑1                                                                                                                                                                                                                                                CATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAAGTGCACAGGTATGGATCAACGTGAACTTCGTCCGGGATCTCTTTTTTCAGCTTCTGGAACAA‑TTCGATCGGCATGCTG     <  2:202004/251‑1                                                                                                                                                                                                                                                 ATTACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGAATGTTGCCCTGCGCTTTCAATTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACCCGCACCTCGTTGAATGGCGGTTTTTGGTTGTTAATTTCGGAATAGTAAGGGCACAGGTATAGATCAACGTGAACTTCGTCCCGGATCTCTTTTTTTAGCTTCTGGAACAA‑TTCGATCGGCCTGCTGT    >  1:80642/1‑251                                                                                                                                                                                                                                                   TACCCAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTTTGGTTGTTAATTTTGTAATAAGAAGTGCACAGGGATGGATCAACCTGAACTTCGTCCGGGGTTTCTTTTTTTAGCTTTTGGAAAAAATTCG‑TCGGCATGCTGTTt  >  1:83453/1‑250                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/258153‑257908 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAATTTTGCGCCATCAGTATACGGTGGAGTGTAACCATAGGCGGGCATGTTGCCCTGCGCTTTCACTTTATTAACAATGATATCGCGGTCCATACCTAGTTTCAGTGCGGTACGCACACGCACATCGTTGAATGGCGGTTTCTGGTTGTTAATTTCGTAATAGTAAGTGCACAGGTATGGATCAACGTGAACTTCGTCCGGGATCTCTTTTTTCAGCTTCTGGAACAA‑TTCGATCGGCATGCTGTTA  <  NC_000913/1302240‑1301994

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.