| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,031,097 | (GC)4→3 | coding (1220‑1221/1419 nt) | dcm ← | DNA‑cytosine methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,031,091 | 0 | G | . | 96.7% | 256.7 / 1.4 | 61 | coding (1227/1419 nt) | dcm | DNA‑cytosine methyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base . (23/35); total (26/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
| * | NC_000913 | 2,031,092 | 0 | C | . | 95.1% | 257.1 / 4.1 | 61 | coding (1226/1419 nt) | dcm | DNA‑cytosine methyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (3/0); new base . (23/35); total (26/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.22e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
TCTCTATCGCCGTATCACGCGTGGCAATCGCGCGCATATTTTTGCTGCGAGTGGCCTTATCGTGAACGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAAGCGCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATCGATAGAGGTACTTC > NC_000913/2030843‑2031331 || tctcTATCGCCGTATCCCGCGTGGCAATCGCGCGCATATTTTTGCTGCGAGGGGCCTTATCGTGAACGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAAgc < 2:312272/250‑1 (MQ=255) tctATCGCCGTATCACGCGTGGCAATCGCGCGCATATTTTTGCTGCGAGTGGCCTTATCGTGAACGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAACCCAATTAAgcgcg > 2:550205/1‑251 (MQ=255) ccGTACCACGCGGGGCAATCGCTGGCATATTTTTGCTGCGAGAGGCCTTACCGTGAACGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCTCCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTGCTCCCGGCGCTTCAAAACCCATTAAgcgcgcattccc < 2:136411/251‑7 (MQ=255) cgTGGCAATCGCGCGCATATTTTTGCTGCGAGTGGCCTTATCGTGAACGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTaa < 1:620350/251‑1 (MQ=255) gtgtaattcacgcacATATTTTTGCTGCGAGTGGCCTTATAGTGAACGTCGGACATGTTATGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTGTTGGATCAATCAGTTTTGCAGCCGCGACACAGACCGGCCAGACCACAGAGTTACCGAACTGGCGATAGGCCTGCAG‑GTGCGAAACCGGGATACGAAATTTCGCTTCTCCCGGCGCATCAAACCCCCTTAAGCGC‑C‑CATTCCCGAgcctgtaac > 2:529250/15‑243 (MQ=255) ggCAATCGCGCGCATATTTTTGCTGCGAGTGGCCTTATCGTGAACGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCg > 2:353277/1‑251 (MQ=255) gcgcgcATATTTTTGCTGCGAGTGGCCTTATCGTGAACGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGa < 1:265938/251‑1 (MQ=255) gcATATTTGTGCTGCGAGGGGCCTTATCGTGAACGCCGGCCATGTTGTGCCGATTGCTGCCGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCGCCCGGCGCTTTAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGAt < 2:683763/251‑1 (MQ=255) atagttgtgctgcGAGTGGCCTTAGCGTGAACGTCGGCCATGTTGGGCCTCTTGCGGACGCAACGCCTCCGACTGTTTGATTTTTGGCGCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGt < 1:603125/244‑1 (MQ=255) ttttTCTGCGAGTGGCCTTATCTTGAACTGGGGCCCTGTTGTGCCTCTTGCTGACGCAACGCCACCTCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACGGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGc < 2:700535/250‑1 (MQ=255) tttGCTGCGAGTGGCCTTATCGTGAACGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCACCGCATGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGCATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTg > 1:644198/1‑251 (MQ=255) ttGCTGGGAGTGGCCTTATCGTGAACGTCGGCCAGGTTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTg < 1:458174/250‑1 (MQ=255) gctgcGAGTGGCCTTATCGTGAACGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGAtt < 2:205649/251‑1 (MQ=255) ctgcgcgtggtattATCCTGAAAGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTc > 2:468688/13‑251 (MQ=255) gAGTGGCCTTATCGTGAACGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGCGGCGTTAACCGACGTGGACGATGTTGCTGCTTCAGCg > 2:530336/1‑251 (MQ=255) aGTGGCCTTATCGTGAACGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGCCCACCGAGTTCCCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGCTGTTGCTGCTTCAACgg > 2:681529/1‑251 (MQ=255) tGGCCTTATCGTGAACGTCGGCCATTTTGGGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCGCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGa < 2:607505/250‑1 (MQ=255) ggCCTTATCGGGAACTTCGTCCATGTTGTGCCTCTTGCTGACGCACCGCCGCCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGACCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGAt < 2:25337/250‑1 (MQ=255) ttATCGTGAACGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGCTGTTGCTGATTCAGCGGATCGTc > 2:217681/1‑250 (MQ=255) tGAACGGCGGCCATGGTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATCTTTGGCTCAAGCAGTCTTGCCACCGAGGAAAAGAGGGGAAAGAAAAAAGAGGGACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATCCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCCAAGTCt > 2:258982/1‑251 (MQ=255) aaCGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCttt < 1:204474/251‑1 (MQ=255) cGGCCATGTTGTCCCTATTTCTGACGCAACGACCCCGCCTGTTTGATTTTTGGCTCAAGCAGTTGTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTGCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTCTCTCa < 2:407177/250‑1 (MQ=255) ttGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCa < 1:353277/250‑1 (MQ=255) gCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGcc > 1:211324/1‑251 (MQ=255) gACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCATCcgcg < 1:226594/251‑1 (MQ=255) cAACGCCACAGCATGTTTGAATTTTGGCTCACGCAGTATTGCCCCCGCGGCAAAGCCCGGCACGACCACCGAGTTACCGAACTGGCGCTAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCACGAGGCGTTAACCGACGTGGACGCTGTTGCTGATTCCGCGGATCGTCAAAGTCTTTCTCACACGTGGCCATATCCCAGCcg > 2:415012/1‑245 (MQ=255) aaCGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGcgatcga < 1:127017/251‑1 (MQ=255) gCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAAttt < 1:681529/251‑1 (MQ=255) ccTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGCTTAAAATTTc > 1:8642/1‑251 (MQ=255) aTTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCAt < 1:475107/251‑1 (MQ=255) tttGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATcg < 2:210170/250‑2 (MQ=255) ggCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGt < 1:530336/251‑1 (MQ=255) cAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAAcgc > 1:15449/1‑251 (MQ=255) tGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGCTTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCCTCTTTGTAATAACGCGCAGAc > 1:85724/1‑251 (MQ=255) aCCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGAAAGGCCTG‑AGTGTCCGAAACAGGAATACGGCAATCCACTTATCCCGGCAATTCACAACCCATTAAGCGAGCACA‑‑CCAGCGGCGTTAACCGACACGGCCGATGCTGCCGATTCCGCGGATCGTAAAAGTCTTTCTCACCCGTGGACATATCCCAGCCGCGATCGACTAAAATTTCCGCGCCCTCTTTGTAATAACGCGCAGAAAGcc > 1:649407/1‑250 (MQ=255) cgGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTTCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTAcg < 1:432632/251‑1 (MQ=255) cgGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAAGAACGCGCAGACAGCGTAcg < 1:550205/251‑1 (MQ=255) cgGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCAGTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTAcg < 2:345659/251‑1 (MQ=255) ccGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCt < 1:484909/251‑1 (MQ=255) ggccagACCACCGAGTTGCCGAACTGGCGAGTGGCCTG‑AGTGTCCGAATCCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCAGTAA‑‑GCGCGCATTCCCGTGGCGTGAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGGCAGCGTACGCGTGACGCttt < 2:509402/246‑1 (MQ=255) gACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGAGGGACGCTTTGCggg > 2:302462/1‑250 (MQ=255) caccGAGTTACCGAACTGGCGATAGGCCTG‑AGGGACCGACACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGGTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCGCCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTGGCGGATTg < 2:167051/251‑1 (MQ=255) cGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTc < 1:468688/251‑1 (MQ=255) aCCGAACGGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATa < 2:577524/250‑1 (MQ=255) ggCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGACTTTCGCTTCTCCCGGAGCTTCAAAACCCCTTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGCTGTTGCTGATTCAGAGGATCGTCAAAGTCTTTCTCACCAGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATACCGCGCAGACAGCGTACTCGTGACGCTTTGCGGATTGTTCGGATAAACCATTcc > 2:48594/1‑251 (MQ=255) ggCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTcc > 1:544590/1‑251 (MQ=255) gCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCCCCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCa < 2:280317/251‑1 (MQ=255) gCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCa < 2:237845/251‑1 (MQ=255) aGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAAc < 1:242769/250‑1 (MQ=255) tG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAACGTACGAGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGCAGc > 2:403311/1‑251 (MQ=255) aGTGTCCGCAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGATGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCTATTAAAATTTCCGCGCCTTCTTTTTAATAACGCGCAGACAGCGTTCGCGTGACGCTTGGCGGATTGTTCGGATAAACCAGTTCATAACCGAAGCCg < 2:460141/251‑1 (MQ=255) gtgtCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAAGCATTCCATAACCGAAGCCGt > 1:383749/1‑251 (MQ=255) ccGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTAcc < 1:6493/251‑1 (MQ=255) gAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGACAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACcgc > 1:678585/1‑251 (MQ=255) aaaCCGGAATACGGAATTTCTCTTCCCCCGGCGCTTCAAACCCCATTAA‑‑GCGCGAATTCCCGAGTCGTTATCCGACGTGGACGAGGTTGCTTATGCAGCGGATCGTCAAAGTCTTTCTCGCCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTTTAATAACGCGCAGACAGCGTACGCGTGACGCTTGGCGTAGTGTTCGGAGAAGTCATTGCAGAACCGAATCCGTTACcgcg < 2:608334/251‑1 (MQ=255) ccGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGCTTGTTCGGATAAACCATTCCATAACCGAAACCGTTACCgcgcgc > 2:6098/1‑251 (MQ=255) aatacgtcaTTTCGCTTCTCACGGCGCTTCACAACTCAT‑AAAC‑CGCCCATTACCAAAGCGTTAACCACCGTGAGCGATTTTGCTGATTCAGCGGATCGTGAAAGTCTTTCTCACGCGCGTCCATATCCCAGCCGCGATCGATTCAAACTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTACGGATAAACCATTCAACAACCGAAGCCGTTACCGCGAGCCTg > 2:92424/9‑250 (MQ=255) tCGCTTCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCg < 1:162052/250‑1 (MQ=255) ttCTCCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCatat > 2:541939/1‑251 (MQ=255) tcCCGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATCg > 2:16165/1‑250 (MQ=255) cccGGCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATc < 1:404752/248‑1 (MQ=255) cccGGCGCTTCAAAACCCATTAA‑‑GCGCGCATGCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATCGAt < 2:24521/251‑1 (MQ=255) ggCGCTTCAAAACCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATCGAtcg > 1:33640/1‑248 (MQ=255) aaaaCCCATTAA‑‑GCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATCGATAGAGGTACTTc > 1:66923/1‑251 (MQ=255) || TCTCTATCGCCGTATCACGCGTGGCAATCGCGCGCATATTTTTGCTGCGAGTGGCCTTATCGTGAACGTCGGCCATGTTGTGCCTCTTGCTGACGCAACGCCACCGCCTGTTTGATTTTTGGCTCAAGCAGTTTTGCCACCGCGGCAAAGACCGGCACGACCACCGAGTTACCGAACTGGCGATAGGCCTG‑AGTGTCCGAAACCGGAATACGGAATTTCGCTTCTCCCGGCGCTTCAAAACCCATTAAGCGCGCGCATTCCCGAGGCGTTAACCGACGTGGACGATGTTGCTGATTCAGCGGATCGTCAAAGTCTTTCTCACCCGTGGCCATATCCCAGCCGCGATCGATTAAAATTTCCGCGCCATCTTTGTAATAACGCGCAGACAGCGTACGCGTGACGCTTTGCGGATTGTTCGGATAAACCATTCCATAACCGAAGCCGTTACCGCGCGCCTGATGTTTTTTCGCATATCGATAGAGGTACTTC > NC_000913/2030843‑2031331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |