| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,966,530 | 2 bp→TT | coding (114‑115/1260 nt) | rho → | transcription termination factor Rho |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,966,530 | 0 | C | T | 100.0% | 91.9 / NA | 29 | I38I (ATC→ATT) | rho | transcription termination factor Rho |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (13/16); total (13/16) | |||||||||||
| * | NC_000913 | 3,966,531 | 0 | C | T | 100.0% | 90.0 / NA | 29 | L39L (CTG→TTG) | rho | transcription termination factor Rho |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (13/16); total (13/16) | |||||||||||
ACTCTCCTGTGACCAGGCAGCGAAAAGACATGAGTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTA > NC_000913/3966292‑3966765 || aCTCTCCTGTGACCAGGCAGCGAAAAGACATGAGTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCAc < 1:235917/251‑1 (MQ=255) ctcCTGTGACCAGGCAGCGAAAAGACATGAGTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATGCACAACATTAAGTTCGAGATTTACCCCAAGTGTAAGAACTCACACCACTATGAATCGTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCGCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACg < 2:120508/249‑1 (MQ=255) ccAGGCAGCGAAAAGACATGAGTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGc < 1:265935/251‑1 (MQ=255) aGGCAGCGAAAAGACAAGAGTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGTGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCgt < 2:58410/251‑2 (MQ=255) gCGAAAAGACATGAGTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGata < 2:114066/251‑1 (MQ=255) aaaaGACATGAGTCGATGACCGTAAACAGGCATGGATGATCCTGAGATACCACTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAGGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGGGGCGAAGATATCt > 1:153531/1‑251 (MQ=255) aGACATGAGTCGATGACCGTAAACAGGCATGGATGAGCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTg < 1:122089/251‑1 (MQ=255) gAGTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATg < 2:196273/251‑1 (MQ=255) cATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAgg > 1:248004/1‑251 (MQ=255) ccATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATTAATCTTACCGAATTAAAGAATACGCCGGGTTCTGAGCTGATCACTCTCGGCTAAAATATGTGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGTAGCAGCATTCAGAGAGTGGCGAAGATATCGTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTtcctcc < 1:155476/250‑1 (MQ=255) tCACAACATTAAGTTCGAGAGTTACCCCAAGTTTAAGAACTCACACCACTATTAATCTTACCGAATTAAAGAATACGCCTGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTc < 2:154620/250‑1 (MQ=255) gTTCGAGATTTACCCCAAGTGTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTcc < 2:279513/251‑1 (MQ=255) agaTTTACCCCAAGCTTAAGAACTCACACCACTATGCCTCTTACCGAATTCAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCCCGCAAAGAGTGGCGAAGATTTCTTTGGTGATGGCGTACTGGAGACATTGCAGGATGGATTTGGTTTCCTCTGTTCCGCTGACAGCTCCtccat > 2:54077/1‑247 (MQ=255) aaCTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGCGGCGAAGATATCTTTGGAGATGGCGTACTGGAGATATTGCAGGATGGCTTTGGTTTCCTCCGTTCCGCAGACAGATCCAAACTCGCCGTTCCAGATGACATCt > 1:273471/1‑251 (MQ=255) ttACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCACATc > 1:192010/1‑251 (MQ=255) aTTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGtt > 1:323235/1‑251 (MQ=255) aTACGCCGGTTTCTGCGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCCGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCCAATCCGCCGTTTCAACCTc > 2:21486/1‑251 (MQ=255) aCGCCGGTTTCTGAGCTTTTCACTCGCGTCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCg < 1:310394/251‑1 (MQ=255) aCGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCCGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCg > 1:200606/1‑251 (MQ=255) gATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCAtct > 1:130646/1‑251 (MQ=255) tCACTCTCGGAGATAATATGGGGCTGGAAAACCTGGCTCGTATGCGTCCGCAGGACATTATTTGTCCCACTTTGCAGCAGCAAGCAAAGAGTGGGGAAGATATCTTTGGTGATGGCGTACTGCACATATTGCAGGAGGGATTTGGTTTCCTCCGTTCCGCAGTCAGCTCCTACCTCGCCGGTCCTGATCACATATACGGTTCCCCTAGCCCAAACCCCCGGTTCTCCCTTCGCACTGGTGATACCATctct > 2:305149/1‑251 (MQ=255) aCTCGCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTGTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCCCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTgg < 2:130646/251‑1 (MQ=255) ggCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGGGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTggaa > 1:10044/1‑245 (MQ=255) atatGGGGCTGGAAAACCTGGCTCGTATGGGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTcgcccg < 2:226009/251‑1 (MQ=255) gCTGGAAACCCTGGCTAGTAGGCGTAAGCAGGACATTTTTTTTGCCTTTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGAGGGTTTTGGTTCCCCCCTTCCCGCAGACAGCTCCTCCCTCGCCGGTCCTGAGGACATCTGCGTTCCCCCTACCAAAATCCGCCGTTTCACCCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAaag < 2:248004/251‑1 (MQ=255) tGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGAACGAAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAAACAGCTCCTACCTCGCCGGCCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCACCCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGCAAGAAGGTGAACGc > 1:168085/1‑251 (MQ=255) aGCAGGACATTATTTTGGCCATTTTGAACCACCACGAAAAGAGGGGCAAAAATATCTTGGGTGATGGTGTACGGGAGATATTGCAGGATGGATTTGGTTTCCCCGGTTCCGCAGCCGTCTCGGCCCCCGCCGGCCCTGATGACATGTCCTTTCCCCCTAGCAAAATCCTCCGTGACAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTGTTTTGCGctgctg < 1:56747/251‑1 (MQ=255) cATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGtt > 1:33853/1‑250 (MQ=255) aattattTTTGCTATTTGGAAGAAGCACGAAAAGAGGGGGGAAGTTTTTTTGGGTGATGGCGTCTTGGAGATATTGAAGGATGGTTTTGGTTTCCTCCGTTCCGAAGACAGCTCCTCCCTCGCGGGTCCTGATGACTTCTCCTTTTCCCCTACCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCGGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTa < 2:99147/250‑1 (MQ=255) || ACTCTCCTGTGACCAGGCAGCGAAAAGACATGAGTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTA > NC_000913/3966292‑3966765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |