| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,284,044 | 0 | T | A | 30.9% | 67.1 / 10.3 | 42 | T287S (ACA→TCA) | actP | acetate/glycolate:cation symporter |
| Reads supporting (aligned to +/- strand): ref base T (21/8); new base A (2/11); total (23/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.41e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGAGGATAGTGGCGAAAGCAACCGCTGAAATAAAACCGAGGAACAGGTTGCCGCCCACTGCATTCGCCAGGTGAACGGCCGCCATGTTGTTACCACCAATCAGATGGCCCGCCGCGTCTTTATA‑TTCCGG‑ATTCGCACCAACCA‑GCATGA‑TCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGACGTGTTTCATCACCATAAAGGCCATAAAGCTGGCACCGAACAGCAACAGCACGGCTTTGATAATTTGCACCC > NC_000913/4283795‑4284286 | gggggATAGTGGCGAAAGCAACCGCGTAAATAAAACCGAGGAACAGGTTGCCGCCCACTGCATTCGCCAGGTGAACGGCCGCCATGTTGTTACCACCAATCAGATGGCCCGCCGCGTCTTTATA‑TTCCGG‑ATTCGCACCAACCA‑GCATGA‑TCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGGGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGTGCATCGCTGACTGTa < 2:300923/248‑1 (MQ=255) gAGGCTAGTGGCGAAAGCAAACGCTGAACTAAAACCGAGGAACAGGTTGCCGCCCACTGCATACGCCAGGTGTAAGGCCGCCATGTTGTTACCACCAATCAGATGGCCCGCCGCGTCTTTATA‑TTCCGG‑ATTCGCACCAACCA‑GCATGA‑TCG‑CGCCGCACCCGATAATAGAGGGCAGCCTATAGAAGTAGCCC‑ATAAC‑CCCCGTGTCGTACAACACGCTCTTA‑CGTGCTTCG‑CGGGCATAGCTGACTGTa > 2:101851/1‑250 (MQ=255) agaaaCCGCTGAAATAAAACCGAGGAACAGGTGCCCGCCCACGGCATTCGCCAGGTGAACGGCCGCCATGGTGTTACCACCAATCAGATGGCCCGCCGCGTCTTTATA‑TTCCGG‑ATTCGCACCAACCA‑GCATGA‑TCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGGAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCTGCTCTGACTGTAAAGAGGCGCAGCAGaa < 2:168526/248‑1 (MQ=255) tGAAATAAAACCGAGGAACAGGTTGCCGCCCACTGCATTCGCCAGGTGAACGGCCGCCATGTTGTTACCACCAATCAGATGGCCCGCCGCGTCTTTATA‑TTCCGG‑ATTCGCACCAACCA‑GCATGA‑TCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGAATCAGAATGTGCGGc > 1:220232/1‑250 (MQ=255) gAAATAAAACCGAGGAACAGGTTGCCGCCCACTGCATTCGCCAGGTGAACGGCCGCCATGTTGGTACCACCAATCAGAGGGCCCGCCGCGTCTTTATA‑TTCCGG‑ATTCGCACCAACCA‑GCATGA‑TCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTGA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCTTCAGAATGTGCGGCaa < 2:124132/251‑1 (MQ=255) gAGGAACAGGTTGCCGCCCACTGCATTCGCCAGGTGAACGGCCGCCATGTTGTTACCACCAATCAGATGGCCCGCCGCGTCTTTATA‑TTCCGG‑ATTCGCACCAACCA‑GCATGA‑TCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTAc > 2:87126/1‑251 (MQ=255) gAGGAACAGGTTGCCGCCCACTGCATTCGCCAGGTGAACGGCCGCCATGTTGTTACCACCAATCAGATGGCCCGCCGCGTCTTTATA‑TTCCGG‑ATTCGCACCAACCA‑GCATGA‑TCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTAc > 1:252366/1‑251 (MQ=255) gccCACTGCATTCGCCAGGTGAACGGCCGCCATGTTGTTACCACCAATCAGATGGCCCGCCGCGTCTTTATA‑TTCCGG‑ATTCGCACCAACCA‑GCATGA‑TCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTccc > 1:118454/1‑250 (MQ=255) cGGCCGCCATGTTGTTACCACCAATCAGATGGCCCGCCGCGTCTTTATA‑TTACGG‑TTTCGCACCAACCA‑GCATGA‑TCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTCCCAAACATCAGTCCCAGACCCAGAGAGAGCGCgg > 2:198723/1‑246 (MQ=255) ccgtgttgtTACCACCAACCAGATGGCCCCCCGCGTTTTTATA‑TTCCGG‑ATTCGCACAAACCA‑GCATGA‑GCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCTTAGAACACGCTCTTA‑CTTGCTTCG‑CGGGCATCGCTGACTGAAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCt < 1:301475/248‑1 (MQ=255) cATGTTGTTACCACCAATCAGATGGCCCGCCGCGTCTTTATA‑TTCCGG‑ATTCGCACCAACCA‑GCATGA‑TCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCtt > 1:264948/1‑251 (MQ=255) atggtgttcaccacaAACCAGAGGGCCCGCCGCGTCTTTATA‑TCCCGG‑ATCGGCCCCAACCA‑GCATGA‑TCG‑CGCCGAAGCCGAAAAAAAAGGTAAGAATATAGAAGTAGCCC‑AAAAA‑CCGGGGGGCGAAGAACCCGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAGGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCtt < 1:47523/242‑1 (MQ=255) ggttggttaccccaaatcaatgggCCCGCCGCGT‑TGTATAATTCCGG‑ATTCGCCCCAACCA‑TCATGA‑TCG‑CGCGGAGGCGGATAAAAAAGGTAAGAAAACAGAAGGAGCCC‑ATAAT‑CCGGGGGGCGTAGAACTCGCTCTTT‑CGTTGTTCG‑CGGGCATCGCGGACTGTAAAGAAGCGACTCAGAATGTCCGGCAACCCCGCCTTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCttt < 1:220185/229‑1 (MQ=255) aTGTTGTTCCCACCAATCAGATGGCCCGCCGCGTCTTTATA‑TTCCGG‑ATTCGCACCAACCA‑GCATGA‑TCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAACCATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCttt > 1:200972/1‑251 (MQ=255) aaagtgcccggccgcGTTTTAATA‑TTCCGG‑ATTCGCCCCACCCA‑G‑ATGAACCG‑CGCCAAAGCGGATAATAAAGGGCAGAATAGAGAGGGAGCCC‑ATAAA‑CCGGGGGGGGTAGAACGCGCTCTTA‑CGTGCTCCG‑CGGGCATCCCGGATTGAAAAGAAGCGCACCAGAAGGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCTAGAGAGAGCGCGGAGATCGGATCTTGCTCCAGCCCGCCCGGCt < 2:162433/241‑1 (MQ=255) ggCCCGCCGCGTCTTTATA‑TTCCGG‑ATTCGCACCAACCA‑GCATGA‑TCG‑AGCGGCCGCCGATAATACAGTGCAGAATCTCGAAGTAGCCA‑ATAGA‑CCCGGTGGCGTAGTACCCGCTCTTA‑CGTGTTTAG‑CGGGCATGGCTGACTGTAAAGAAGCGCATCAGCATGCGCGGCAAGCCCGCCGGACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGCAACTTTCACCAGCCCGCTCCGCTTCatc > 1:201130/1‑250 (MQ=255) ccgcgccgctgttttATA‑TTCCGG‑AT‑CCCCCCAACCAAGAATGC‑ACG‑CGCCGAAGCGGAAAAAAAAGGACAAAATATAAAAGTACCCC‑AAAAC‑CCCGGTGGCGAAAACCACGCTCTTG‑CGTGCTTCG‑CGGCCATCGCTGACTGAAAAGAAGCCCATAAGATTTGGCGACAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCatg‑a < 2:29829/239‑1 (MQ=255) cgccgcGTCTTTA‑A‑TTCCGGGATCCGCACCAACCA‑GAATGA‑TCG‑CGCGGAACCCGATAATAAAGGAAAGAAAATAGAAGTAGCCC‑ATAAA‑CCCGGGGGCGTAGAACACGCTCTTA‑GGTGCTTCG‑CGGGCATCTCTGACTGAAAAAAAGCGCATAAGAATGTGGGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGt < 2:295618/251‑1 (MQ=255) ttATA‑TTCCTG‑AGCCGCCCCAACCA‑GCATGA‑‑CGTCGCCGAAGCGTATAAAAAAGGCCAGAATATAAAAG‑AGCCCCATACA‑CCCGGTGGCGAAGAACCCCCTCGTC‑CGTG‑TTCGGCGGGCTTCGCGGACTAAAAAGAAGGGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGGCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACTCCtt < 2:276567/250‑1 (MQ=255) acca‑GCATGA‑TCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTc > 1:8993/1‑251 (MQ=255) cgCATGA‑GCG‑CGCCGAAGCCGAAAATAAAGGAAAAAATAAAAAAGTAGCCA‑ATAAC‑CCCGGGGGCGAAGAACCCGCTCTTA‑CGGGCTTCG‑CGGGCATCGCTATCTGAAAAAAAGCGCATCAGAATGGGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCATCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACt < 2:146774/250‑1 (MQ=255) a‑TCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑CTAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAAc > 1:194990/1‑249 (MQ=255) gaccccgcaaaaGCCGAAAATAAGGGAAAGAATATAGAAGTA‑CCC‑AAAAAGCCCGGTGGGGTAGAACCCGTTTTTC‑CGTGCTGCG‑CGGGCATCGCGGACTGAAAAGAAGCGCATCAGATTGGGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACa < 1:11281/241‑1 (MQ=255) tag‑cgcCTAAGCCGATAATAAAGGACAGAATATAGAAGTAGCCC‑ATAAA‑CCCTGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGCGCGCGGTGATCGCATCTTTCACCAGCCCGCCCGGCCT‑ACGTATGTCGACGCCTTCCGGGTGTACAGTCATCGTTTCACTGAAc > 2:80973/3‑248 (MQ=255) cg‑cgCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAAc > 2:56396/1‑247 (MQ=255) ccaagcccaaaaaaaaagacaaaaaTAAAGAAGTACCCC‑AAAAC‑CCCGGTGCCGTAAAACCCGCT‑TTATCTTGCCACG‑CGGGCACCGCTGACTGAAAAGAAGCGAATCAAAAGGTGCGGAAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGAttgtt < 2:125528/228‑1 (MQ=255) gTCAGAATATAGAAGTAGCCC‑AAAAC‑CCCGGTGGCGCAGAACCCGCTCTTA‑CGTGCTCCG‑CGGGCATCGTGGACTGTAAAGAATCGCATCAGAATGTGCGGCGAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGACgtg < 1:62838/251‑1 (MQ=255) aaGAATATAGAAGTAGCCC‑ATAAC‑CCCGGGGGCGAAAAACCCGCTCTTC‑CGTGCTCCG‑CGGGCATCGCGGACTGTAAAGAAGCGCATCAGAAGGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGACGTGtt < 1:234786/250‑1 (MQ=255) aGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGGTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGAGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGACGTGttt > 1:38499/1‑251 (MQ=255) aaaaatatagatgcccaaTAAC‑CCCGGTGGCGTAGAACCCTCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCAACAGAAGGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTGCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGACGTGTTtc < 1:48668/234‑1 (MQ=255) atatAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGAGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGCCGCGTTtcat > 2:248232/1‑251 (MQ=255) gAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGCCCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAACGCCGACGTGTTTCATCAcc > 2:33305/1‑250 (MQ=255) aaaa‑CCCGGGTGCGTAAAACACGCTCTTT‑CGTGCTCCG‑CGGGCATCTCTGACTGAAAAAAATCGCATAAGAAGGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGACGTGTTGCATCACCATAAAGGCCATa < 1:68178/250‑1 (MQ=255) cccGGTGGCGAAGAACCCCCTCTTA‑CGTGCTTCG‑CGGGCACCGCTGACTGAAAAGAAGCGCATCAGATTGGGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGACGTGTTTCATCACCATAAAGGCCATAAAGc < 1:104244/251‑1 (MQ=255) gcgaaGAACACGTTCTTA‑CGTGCTCGG‑CGGGCACCGCTAACTGAAAAGAAGCGCATCAGAATGTGCGGAAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGACGTGTTTCATCACCATAAAGGCCATAAAGCTGGCAcc < 2:264948/247‑1 (MQ=255) gTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGACGAGTTTCATCACCATAAAGGCAATAAAGCTGGCACCg > 2:153946/1‑250 (MQ=255) ctctTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGCCGTGTTTCATCACCATAAAGGCCATAAAGCTGGCACCGaacagcaac > 2:85229/1‑249 (MQ=255) aacGCTGACTGAAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGACGGGTTTCATCACCATAAAGGCCATAAAGCTGGCACCGAACAGCAACAGCACGGCTTTGATAATTTGcc > 2:208840/3‑250 (MQ=255) tCGCTGACTGAAAGGAAGCGCATCAGAATGTACGGCAAGCCCCCCGTACCAAAAATCAGTCCCAGCCCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACCGATTGTTGAAGCTAAAGCCGACGTGTTTCTTCCCCATCAAGGCCATAAAGCTGGCACCGCACAGCCACAGCACGGCTTTGATAATTTGCAc > 2:301371/1‑251 (MQ=255) gCTGACTGTCAAGAAGCGCATAAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGCCCCACAGAGAGCGCGGCGATCCGATCTTCCACAACCCCACCCGGCTTCATG‑GTGTCGGCCCCTTTCGGGCGTACCGCCATCTCTTCACTGAACAGATTGTCGAAGCTAAAGCCGACGTGTTTCCTACCCATAAAGCCCCTAAAGCTCGCACCGAACAGCAACAGCCCGTCtttcgtcatttgccccc > 2:103011/1‑237 (MQ=255) gCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGACGTGTTTCATCACCATAAAGGCCATAAAGCTGGCACCGAACAGCAACAGCACGGCTTTGATAATTTGCAccc > 1:42719/1‑251 (MQ=255) tGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGACGTGTTTCATCACCCTAAAGGCCATAAAGCTGGCACCGAACAGCAACAGCACGGCTTTGATAATTTGCAccc > 1:276731/1‑249 (MQ=255) | CGAGGATAGTGGCGAAAGCAACCGCTGAAATAAAACCGAGGAACAGGTTGCCGCCCACTGCATTCGCCAGGTGAACGGCCGCCATGTTGTTACCACCAATCAGATGGCCCGCCGCGTCTTTATA‑TTCCGG‑ATTCGCACCAACCA‑GCATGA‑TCG‑CGCCGAAGCCGATAATAAAGGTCAGAATATAGAAGTAGCCC‑ATAAA‑CCCGGTGGCGTAGAACACGCTCTTA‑CGTGCTTCG‑CGGGCATCGCTGACTGTAAAGAAGCGCATCAGAATGTGCGGCAAGCCCGCCGTACCAAACATCAGTCCCAGACCCAGAGAGAGCGCGGAGATCGGATCTTTCACCAGCCCGCCCGGCTTCATG‑ATGTCGACACCTTTCGGGTGTACCGCCATCGCTTCACTGAACAGATTGTTGAAGCTAAAGCCGACGTGTTTCATCACCATAAAGGCCATAAAGCTGGCACCGAACAGCAACAGCACGGCTTTGATAATTTGCACCC > NC_000913/4283795‑4284286 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |