Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	790,832	Δ1 bp	coding (198/1047 nt)	galT ←	galactose‑1‑phosphate uridylyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	790,832	0	G	.	100.0%	122.4 / NA	27	coding (198/1047 nt)	galT	galactose‑1‑phosphate uridylyltransferase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (14/13);  total (14/13)

CCTGCACCCATGGGTACGTTTTCCCCAGTTCTGCGGTTTGCTCCTGCCAGGTTTTGACGATTTCCGTCAATGCTGCAACGCTGAGCTCTGGCAGCGTTTTACTGTGATCCGGTGAAAAGCAGATCACCCGGCTGGTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGGGTTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCGGTGAGCGGGTTGTAGCGGCGATGTGGATGATCAACGGGATTAAATTGCGTCATGGTCGTTCCTTAATCGGGATATCCCTGTGGATGGCGTGACTGCCAGT  >  NC_000913/790582‑791076                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                     ccTGCACCCATGGGTACGTTTTCCCCAGTTCTGCGGTTTGCTCCTGCCAGGTTTTGACGATTTCCGTCAATGCTGCAACGCTGCGCTCTGGCAGCGTTTTACTGTGATCCGGTGAAAAGCAGATCACCCGGCTGGTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCgggg                                                                                                                                                                                                                                                      >  1:200074/1‑251 (MQ=255)     cACCCATGGGTACGTTTTCCCCAGTTCTGCGGGTTGCTCCTGCCCGGGTTTGGCGAATTCCGTCAAAGGTGCAACGCTTGGCTCTGGCAGCGTTTGACTGTGATCCGGTGAAAAGCAGATCACCCGGCTGGTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACAGCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGGtttt                                                                                                                                                                                                                                                   <  2:226067/250‑1 (MQ=255)       cccATGGGGTCGTTGTCCCCAGTTCTGCGGTTTGCTCCTGCCAGGTTTTGACGATTTCCGTCAATGCTGCAACGCTGAGCTCTGGCAGCGTTTTACGGTGATCCGGGGAAAAGCAGATCACCCGGCTGGTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCTTGTCAGACATCAAAGCCGTAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTAt                                                                                                                                                                                                                                               <  1:307418/251‑1 (MQ=255)        ccATGGGTACGTTTTCCCCAGTTCTGCGGTTTGCTCCTGCCAGGTTTTGACGATTTCCGTCAATGCTGCAACGCTGAGCTCTGGCAGCGTTTTACTGTGATCCGGTGAAAAGCAGATCACCCGGCTGGTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATc                                                                                                                                                                                                                                              >  2:183915/1‑251 (MQ=255)                 cGTTTTCCCCAGTTCTGCGGTTTGCTCCTGCCAGGTTTTGACGATTTCCGTCAATGCTGCAACGCTGAGCTCTGGCAGCGTTTTACTGTGATCCGGTGAAAAGCAGATCACCCGGCTGGTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCAc                                                                                                                                                                                                                                     <  1:65400/251‑1 (MQ=255)                    tttCCCCAGTTCTGCGGTTTGCTCCTGCCAGGTTTTGACGATTTCCGTCAATGCTGCAACGCTGAGCTCTGGCAGCGTTTTACTGTGATCCGGTGAAAAGCAGATCACCCGGCTGGTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGGGTAATCGGG‑TTTTTATCGCCTGTCAcctg                                                                                                                                                                                                                                  >  2:213277/1‑249 (MQ=255)                                                cAGGTTTTGACGATTTCCGTCAATGCTGCAACGCTGAGCTCTGGCAGCGTTTTACTGTGATCCGGTGAAAAGCAGATCACCCGGCTGGTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCt                                                                                                                                                                                                      <  1:219225/251‑1 (MQ=255)                                                   gTTTTGACGATTTCCGTCAATGCTGCAACGCTGAGCTCTGGCAGCGTTTTACTGTGATCCGGTGAAAAGCAGATCACCCGGCTGGTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTgg                                                                                                                                                                                                    >  1:224974/1‑250 (MQ=255)                                                        gACGATTTCCGTCAATGCTGCAACGCTGAGCTCTGGCAGCGTTTTACTGTGATCCGGTGAAAAGCAGATCACCCGGCTGGTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCTGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTg                                                                                                                                                                                              <  1:213277/251‑1 (MQ=255)                                                        gACGATTTCCGTCAATGCTGCAACGCTGAGCTCTGGCAGCGTTTTACTGTGATCCGGTGAAAAGCAGATCACCCGGCTGGTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTg                                                                                                                                                                                              <  1:163634/251‑1 (MQ=255)                                                                                gCTGAGCTCTGGCAGCGTTTTACTGTGATCCGGTGAAAAGCAGATCACCCGGCTGGTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTtggctgg                                                                                                                                                                      <  1:183915/251‑1 (MQ=255)                                                                                                                  gAAAAGCAGAGCACCCGGCTGATGCCACGCGCGCTCTGGCAACGCATCAGCGGATCGAGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAACGTCATTAGTGAAAACGTCAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCGCATTACCTGCGCATAGGACGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGGTTCCTGCGCCCCCTGCCAAGGGCGCTTAgcg                                                                                                                                    >  2:146334/1‑251 (MQ=255)                                                                                                                    aaaGCAGATCACCCGGCTGGTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGcgcg                                                                                                                                  >  1:162715/1‑251 (MQ=255)                                                                                                                           atccccctgCTGGTGCCGCGCGCGCTCTGGCAACGCAGCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCATACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCTCCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCGGGGAACTCCTGTTTTGCTGGCGGTTCCTGCGCCCCCTGCCAGGGGCGCTTGGCgcggtgcggt                                                                                                                           <  2:112450/243‑1 (MQ=255)                                                                                                                                       gTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATc                                                                                                               <  1:205114/251‑1 (MQ=255)                                                                                                                                                gcgcTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCATGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCg                                                                                                      >  1:58741/1‑251 (MQ=255)                                                                                                                                                       ggCAACGCATCAGCGGATCGAGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCGGTGAGCg                                                                                               >  2:326625/1‑251 (MQ=255)                                                                                                                                                            cGCATCAGCGGAGCGTGACTTTCTGGCGCAGCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCGTTTTGTCTGGCGGTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGGGCGGTGAAACCAGAATCCAGTGCCCGGTGAGCGGGTTg                                                                                          <  2:224974/251‑1 (MQ=255)                                                                                                                                                              cATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCGGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGTCGCGTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCGGTGAGCGGTTTGTa                                                                                        <  2:146462/251‑1 (MQ=255)                                                                                                                                                                      gATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCGGTGAGCGGGTTGTAGCGGCGAt                                                                                >  1:1156/1‑251 (MQ=255)                                                                                                                                                                                    ggCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGGCAGTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGGGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCGGGGAGCGGGTTGTAGCGGCGATGTGGATGATCAAc                                                                   <  2:195071/250‑1 (MQ=255)                                                                                                                                                                                                    cAGACATCAAATCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCGGTGAGCGGGTTGTAGCGGCGATGTGGATGATCAACGGGATTAAATTGCGTc                                                   >  1:116475/1‑250 (MQ=255)                                                                                                                                                                                                      gACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCGGTGAGCGGGTTGTAGCGGCGATGTGGATGATCAACGGGATTAAATTGCGTCATg                                                >  1:264604/1‑251 (MQ=255)                                                                                                                                                                                                                ccGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCGGTGAGCGGGTTGTAGCGGCGATGTGGATGATCAACGGGATTAAATTGCGTCATGGTCGTTCCtt                                      >  1:181928/1‑251 (MQ=255)                                                                                                                                                                                                                                gAAAACGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCGGTGAGCGGGTTGTAGCGGCGATGTGGATGATCAACGTGATTAAATTGCGTCATGGTCGTTCCGGAATCGGTATAGCCCtg                      <  1:109149/251‑1 (MQ=255)                                                                                                                                                                                                                                  aaaCGTAAGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCGGTGAGCGGGTTGTAGCGGCGATGTGGATGATCAACGGGATTAAATTGCGTCATGGTCGTTCCTTAATCGGGATATCCCtgtg                    >  1:120243/1‑251 (MQ=255)                                                                                                                                                                                                                                        aaGTCCCGGTGTAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCGGTGAGCGGGTTGTAGCGGCGATGTGGATGATCAACGGGATTAAATTGCGTCATGGTCGTTCCTTAATCGGGATATCCCTGTGGATgg               <  1:219635/250‑1 (MQ=255)                                                                                                                                                                                                                                            cccGGTGTACTCGGG‑TTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGCGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCACCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCGGTGAGCGGGTTGTAGCGGCGATGTGGATGATCAACGGGCTTCAATTGCGTCATGGTCGTTCCTTAATCGGGATATCCCTGTGGATGGCGTg           >  2:26856/1‑250 (MQ=255)                                                                                                                                                                                                                                                 tgtAATCGGG‑TTTTTATCGCCTGTCACCCGCACATTACATGCGCAGAGGAAGCAATCTGGATCGTGCGAAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCGGTGAGCGGGTTGTAGCGGCGATGTGGATGATCAACGGGATTAAATTGCGTCATGGTCGTTCCTTAATCGGGATATCCCTGTGGATGGCGTGACtgcc     >  1:13065/1‑251 (MQ=255)                                                                                                                                                                                                                                                     aatcgggTTTTTATCGCCTGTCACCCGCCCATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCAGCTCCCCCTGCCAGGAGCGCGTCGCGCGGAGCGGTGAAACCAAAATCCATTGCCCGGGGAGCGGGTTGTAGCGGCGATGTGGATGATCAACGGGATTAAATTGCGTCATGGGCGTTCCTTAATCGAGATATCCCTGTGGATGGCGAGACtgccagt  >  1:270545/5‑251 (MQ=255)                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                     CCTGCACCCATGGGTACGTTTTCCCCAGTTCTGCGGTTTGCTCCTGCCAGGTTTTGACGATTTCCGTCAATGCTGCAACGCTGAGCTCTGGCAGCGTTTTACTGTGATCCGGTGAAAAGCAGATCACCCGGCTGGTGCCGCGCGCGCTCTGGCAACGCATCAGCGGATCGTGACTTTCTGGCGCATCTGGCGTGTCAGACATCAAAGCCGCAAAGTCATTAGTGAAAACGTAAGTCCCGGTGTAATCGGGGTTTTTATCGCCTGTCACCCGCACATTACCTGCGCAGAGGAAGCAATCTGGATCGTGCGCAGGTAACACCTGTTTGGCTGGCGTTTCCTGCGCCCCCTGCCAGGGGCGCTTAGCGCGGTGCGGTGAAACCAGAATCCATTGCCCGGTGAGCGGGTTGTAGCGGCGATGTGGATGATCAACGGGATTAAATTGCGTCATGGTCGTTCCTTAATCGGGATATCCCTGTGGATGGCGTGACTGCCAGT  >  NC_000913/790582‑791076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑