| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,464,151 | 2 bp→AA | intergenic (+81/+100) | yfdF → / ← mlaA | protein YfdF/intermembrane phospholipid transport system ‑ outer membrane lipoprotein MlaA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,464,151 | 0 | T | A | 100.0% | 39.8 / NA | 14 | intergenic (+81/+101) | yfdF/mlaA | protein YfdF/intermembrane phospholipid transport system ‑ outer membrane lipoprotein MlaA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (10/4); total (10/4) | |||||||||||
| * | NC_000913 | 2,464,152 | 0 | T | A | 100.0% | 36.4 / NA | 14 | intergenic (+82/+100) | yfdF/mlaA | protein YfdF/intermembrane phospholipid transport system ‑ outer membrane lipoprotein MlaA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (10/4); total (10/4) | |||||||||||
GTCGGTAACAAAATTAACGTTGGCCATTCTCAAAAAATATATAAGCATTTTAAGGATCTCGAAGGTAAAATTGAAGAAAGGCTTCAAAATCGCCAGGCTGAATATCAAAATGAAATTAATCAACCATCTGCGCCAGGTGTTAATTTTGATGATATTTAAAATTATTTTTCCAGTTTTTTGATTTTTCAACAGCTGAATATCGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAACAAAAAAGGTGAGTTTTGCGACTCACCTTTTTTATTTGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCG > NC_000913/2463912‑2464387 || gTCGGTAACAAAATTAACGTTGGCCATTCTCAAAAAATATATAAGCATTTTAAGGATCTCGAAGGTAAAATTGAAGAAAGGCTTCAAAATCGCCAGGCTGAATATCAAAATGAAATTAATCAACCATCTGCGCCAGGTGTTAATTTTGATGATATTTAAAATTATTTTTCCAGTTTTTTGATTTTTCAACAGCTGAATATCGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAAAAACGTCTAGGt < 1:178335/251‑1 (MQ=255) tAACGCTGGCCATTCTCAAAAGATATATAAGAATTTTCAGGATCTCGAAGGTAAAATTGAAGAACGGCTTCCACATAGCCAGGCTGAATATCAAATTGAAATTAATCAACCATCTGCGCCAGGTGTTAATTTTGATGCTATTTAACATTATTTTTCCAGTTGTTTGATTTTTCAACAGCTGAATATCGGAAATAGACAGTGATGAACATCAGTATTTTTATATAAAACCGTATAGGTCATTTTAGGTTTAt > 2:148313/1‑251 (MQ=255) gATCTCGAAGGTAAAATTGAAGAAAGGCTTCAAAATCGCCAGGCTGAATATCAAAATGAAATTAATCAACCATCTGCGCCAGGTGTTAATTTTGATGATATTTAAAATTATTTTTCCAGTTTTTTGATTTTTCAACAGCTGAATATCGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAAAAACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAACaaaaa > 1:264046/1‑250 (MQ=255) gATCTCGAAGGTAAAATTGAAGAAAGGCTTCAAAATCGCCAGGCTGAATATCAAAATGAAATTAATCAACCATCTGCGCCAGGTGTTAATTTTGATGATATTTAAAATTATTTTTCCAGTTTTTTGATTTTTCAACAGCTGAATATCGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAAAAACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAACaaaaa > 2:99174/1‑250 (MQ=255) cAAAATCGCCAGGCTGAATATCAAAATGAAATTAATTAACCATCTGCGCCAGGTGTTAATTTTGATGATATTTAAAATTATTTTTCCAGTTTTTTGATTTTTCAACAGCTGAATATCGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAAAAACGTCTAGGGCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAACAAAAAAGGTTAGTTTTGCGACTCACCTTTTTTAttt < 2:233598/251‑1 (MQ=255) aaTCAACCATCTGCGCCAGGTGTTAATTTTGATGATATTTAAAATTATTTTTCCAGTTTTTTGATTTTTCAACAGCTGAATATCGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAAAAACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAACAAAAAAGGTGAGTTTTTCGACTCACCTTTTTTATTTGTTTCTTATTCAGAATCAATATCTTTTAAatc < 1:381597/250‑1 (MQ=255) tttttGATTTTTCAACAGCTGAATATCGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAAAAACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAACAAAAAAGGTGAGTTTTGCGACTCACCTTTTTTATTTGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCg > 1:307510/1‑251 (MQ=255) tttGATTTTTCACCAGCTGAATATCGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAAAAACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAACAAAAAAGGTGAGTTTTGCGACTCACCTTTTTTATTTGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGAGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGAt > 1:330798/1‑251 (MQ=255) cAGCTGAATATCGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAAAAACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAACAAAAAAGGTGAGTTTTGCGACTCACCTTTTTTATTTGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGc > 2:66297/1‑251 (MQ=255) tCGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAAAAACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGCAGTACTTGCGGGATAACAACAAAAAAGGTGAGTTTTGCGACTCACCTTTTTTATTTGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTTCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCCTTAACGATGAAATCATACCGCTGGAAGTAcc > 2:36948/1‑250 (MQ=255) aCGAACATCAGTATTTTTACATAAAAACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAACAAAAAAGGTGAGTTTTGCGACTCACCTTTTTTATTTGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCataat > 1:324228/1‑251 (MQ=255) tCAGTATTTTTACATAAAAACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAACAAAAAAGGTGAGTTTTGCGACTCACCTTTTTTATTTGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAgg > 1:170854/1‑250 (MQ=255) tCAGTATTTTTACATAAAAACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAACAAAAAAGGTGAGTTTTGCGACTCACCTTTTTTATTTGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAgg > 1:39812/1‑250 (MQ=255) gTATTTTTACATAAAAACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAACAAAAAAGGTGAGTTTTGCGACTCACCTTTTTTATTTGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCg < 1:395018/251‑1 (MQ=255) || GTCGGTAACAAAATTAACGTTGGCCATTCTCAAAAAATATATAAGCATTTTAAGGATCTCGAAGGTAAAATTGAAGAAAGGCTTCAAAATCGCCAGGCTGAATATCAAAATGAAATTAATCAACCATCTGCGCCAGGTGTTAATTTTGATGATATTTAAAATTATTTTTCCAGTTTTTTGATTTTTCAACAGCTGAATATCGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAACAAAAAAGGTGAGTTTTGCGACTCACCTTTTTTATTTGTTTCTTATTCAGAATCAATATCTTTTAAATCATCCTGAATCGCTTGTGCGTTCGGATTTTCCTGCGGTTTGAGTTCGCCGCCATTAGCGATGAAATCATGACGCTGGAAGTACGCTTCGCGCACCATAATATAAGGATCG > NC_000913/2463912‑2464387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |