| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,522,187 | C→T | A189T (GCG→ACG) | hofM ← | DNA utilization protein HofM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,522,187 | 0 | C | T | 94.1% | 178.7 / ‑5.9 | 68 | A189T (GCG→ACG) | hofM | DNA utilization protein HofM |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (25/39); minor base G (3/1); total (28/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGACTGAGTGAGTCTTCGCTGTAATCGAAGCGCAGGGAGTCCGGATCCATAT > NC_000913/3521946‑3522420 | gggCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCa < 1:178660/251‑1 (MQ=255) attaatgcgCGGTTTCACCAGTACGCCTTCCCAAGCGCCAGCCCCGGCGCGATGGCAAAGTCGCCGCCTGGGGTCGGTAGCGGCGGCTGAGGAACAGTAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATGTCGCGACGCTTGCGGGATCA‑ACGGAAATCGCGGCCGCCAGCGCCTACGCGCTAGTCATCCCCC‑CCGCCAGTGTGCGCCCCCAGGTAGAGCTCGTCGTCCTCAGCCACTGTTC‑Gtt < 2:412741/243‑1 (MQ=255) tGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCAc < 1:151830/250‑1 (MQ=255) cGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGCCCCCCCCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACgcca < 1:147558/251‑1 (MQ=255) gTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCCCCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTAGAGCGCGTCTTCCACAGCCACTGTTC‑GTTATCACgccaggc < 2:254990/251‑1 (MQ=255) gTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACCGCCTCCCAGGGATCAAATCCACCTTCGCCACCTATCGCGCCGCCTTCGGGATCA‑ACGGATCACGCTGCCGCCCGCTCCTTCGCGCTAGTCCTCCCCC‑CCGCCAGTTTGCGCCCCCAGCTCTAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCCCgccaggc > 2:188942/1‑251 (MQ=255) tcatcaGTCCGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACgccaggcc < 1:120399/250‑1 (MQ=255) cGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGATGAAGAACAGAAACGGCCTCACAGGGATCAAATCCGCCTTCCCCACAAATCACGACGCTTTCGGGATCA‑ACGGATAACGATGCCGCCCGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAAATTGCGCCCCCAGCTATAGAGCGTCGTCCACAACCACCGTTCCGTCA‑CACCCCAGGCCAGaactttct > 1:19014/1‑244 (MQ=255) gCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCCGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGGTTGCGCCCCCAGCTATAGCGCGTCGGCCACAGCCACTGTTC‑GTTATCCCTCCAGGCCAGACATTGCtg > 1:101214/1‑251 (MQ=255) ccTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAGAAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCC‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCtg > 1:197129/1‑250 (MQ=255) aaGCGCAAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGCCGCACAGAAACGGCCTCCCAGGGATCCAATCCCCCTTCGCCACATATCGCGACGCTTTCGGGATCC‑ACGGACAACGCTGCCGCCAGCTCCTTCGCGCTACTCATCCCCC‑CCCCCCGTTTGCGCCCCCAGCTACAGCCCCTCGTTCACAGCCACCGGTC‑GTTATCACccccggcccgaaaatgctggtgcggcg > 2:193974/1‑232 (MQ=255) gcCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGAGACGCTTTCGGGATCC‑ACGGATAACGCTGCCGCCCGCTCCTTCGTGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATCGCGCGTCGTCCCCAGCCACCGTTC‑GTTATCAAGCCAGGCCAGACCTTGCTGATGAGAAGGTa > 1:53678/1‑250 (MQ=255) cAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATACCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCa < 1:277165/251‑1 (MQ=255) cgcgATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGCCGAACAGAAACGGCCTCCCAGGGAGCAAATCAGCCTTCGCCACATATCGCGCCGCTTTCGGGGTCA‑ACGGATAAAGCTGCCGCCCGCTCCTTCGCGCCAGTCATCACCA‑CCCCCCGTTTGCGCCCCCACCTATAGCGCGTCGTCCCCAACCACCTTTC‑GTTATCACTCCAGGCCCGACATTGCTGGTGAGAAGGGAAAAAAGGCAggg > 2:76188/1‑250 (MQ=255) cgATGGCAAATTCTCCACCGGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAAt < 1:251593/251‑1 (MQ=255) gATGGCAAAGTCTCCACCGGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCACCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATc < 1:188942/251‑1 (MQ=255) ggCAAAGTCACCCCCTGGCGTCGGTAGCGGCGGCTGACGAACATAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCAGCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGc < 1:363510/250‑1 (MQ=255) cAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAAAAGAAACGGCCTCCCCGGGATCAAAACCGCCTTCGCCACATATCGCGACGCTTTCGGGGTCA‑CCGTATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑ACGCCAGTTTGAGCCCCCAGCTATAGCCCGTCGGCCACAGCCCCCGTTC‑GTTTTCACCCCCGGCCAGCCATTGCTGATGAGAAGGTaaaaaaagaaagaacagctgt > 2:315547/1‑236 (MQ=255) cAAAGTCCCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCGCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGt < 1:182810/251‑1 (MQ=255) aGTCTCCACCGGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGAACAAATCCGCCTCCGCCACATACCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAAt < 2:46766/251‑1 (MQ=255) ctcCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GGTATCACGCCAGGCCAGACATTGCTGATGTGAAGGTAAAAAAGGCAGGAATCGCTGTAATGcc > 1:4663/1‑250 (MQ=255) gcggctGTAGCGGCGGCTGACGAACAAAACCGCCCTCCCGGGGATCAAACCCGCCGTCGCCACATATCGCGCCGCTTTCGGGACCA‑ACGGAGAACGCTGCCGCCAGCTCCTTCGCGCTAGTCACCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATcc < 2:293292/251‑1 (MQ=255) gcggcgGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATACCGCGACGCTTGCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCGCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATcc < 1:23128/251‑1 (MQ=255) cggcggTAGCGGCGGCTGACGAACAGAAACGGCCCCCCCGGGATCAAATCCGCCTTCGCCCCATATCTCGACGCTTTCGGGATCA‑AAGGAAAAAGCTGCCGCCAGCTCCCTCGCGCTAGGCATCCCCA‑CCGCCAGTTTTCGCCCCCCACTATAGAGCGTCGGCCACAGCCACTGTTC‑GTTTTCCCGCCAGGACAGACATTGCTGATGGGAAGGGACAAAAAGCAGGAAACGCCGTAATGCACTGGCAtacc > 2:314474/1‑248 (MQ=255) gcggTGGCGGCGGCTGCCGAACAGAAACGGCCTCCAAGGGATCAAACCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAAGGCTGCCGCCAGCTCCTTCGCGCTAGTCACCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCggg < 2:380764/251‑1 (MQ=255) ggTAGCGGCGGCTGCCGAACAGAAACGGCCCCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATACCGCGGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGTCAGTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGt < 2:212455/251‑1 (MQ=255) ggTAGCGGCGGCTGAAGAACAGAAAAAGCCTCCCCGGGAACAAATCCGCCTTCGCCACATATCGAGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAACTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAACCACTGTTC‑GTTATCACGCCAGGCCAGCCATTGCTGATGAGAAGGTAAAAAAAGCAGGAATAGCTGTAATGCACTGGCATCCggggg > 2:342618/1‑250 (MQ=255) aGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAAGCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGa < 1:294482/250‑1 (MQ=255) cggcggCTGACGAACAGAAACCGCCTCCCAGGGCTCACATCAGCCTTCGCCACATCTCGACACGCTTTCGGGATCC‑ACGGCTAACCCTGCCGCCAGAACCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCCGACATTGCTGATGAGCAGGTAACAAAGGCAGGAATCGCTGTAATGCCCCGGCATCCGGGGTGATcg > 2:411067/1‑251 (MQ=255) cGAACAGAAACGGCCCCCCAGGGAACAAATCCGCCTTCGCCCCAAATCGCGACGCTTTCGGGATCA‑ACGGATATCGCTGCCGCCAGCTCCTTCGCGCATGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCGCTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATg < 2:31052/251‑1 (MQ=255) aCAGAAACGGCCTCCCAGGGATCAAACCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAac < 1:149177/251‑1 (MQ=255) gAAACGTCCTCCCAGGGATCAAATCCGCCGTCGCCACTAACCGCGACGCTTTCGGTATCA‑ACGGAGAACGCTTCCGCCAGCTCCTTCGCGCTAGTCACCCCCA‑CCGCCAGGTTGCGCCCCCAGCTATAGCGCGTCGGCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATTCACTGGCATCCGGGGTGATCGCGCTCACATGAACACg < 2:340245/251‑1 (MQ=255) aCGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCa > 1:260486/1‑250 (MQ=255) ggCCTCCCAGGGATCAAATCCGCCTTCGCCACATACCGCGACGCTTTCGGGATCA‑ACGAATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCACCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAAcc < 1:205878/251‑1 (MQ=255) caaacccactttcctcacaTACCGCGACGTTTTCGG‑AACACACGGTTAACTCTGCCGCCAGGTCCTTCGCTCTAAACACCCCCT‑CCGCCAGTTTGCGCCCCCAGATATAGCTCGTCGTCCACAGCCACTGTTC‑GGTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCTATGGCATCCGGGGTGATCGCGCTCACATGGACACGCAACCTTTCTGCCagagga < 2:12970/236‑3 (MQ=255) aaaccctcctgcGCCACATAGCGCGACGCTTTCGTGTTCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTaa < 1:266329/240‑1 (MQ=255) ttCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTg > 2:359572/1‑251 (MQ=255) gtgccctctttcgtgactcTTTCGGGCTCA‑CCGGATCACGCTGCAGCCCTCTCCTTCGCGCTAGGCA‑CCCCAGCCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCGCTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCGGTAATGCACTGGCGTCCGGGGTGATCGCGCTCACAGGAACACGCAACCTTGCTTCCAGAGTAAGCAGCGtt < 2:27700/231‑1 (MQ=255) gccccaTATCGGGACGCTTGCGGGATCA‑ACGGATAACGCGGCCGCCAGCTCCTTCGCGCTAGTCACCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCGTTCGGCCAGAGTAAGCGGCGGTGCCa < 2:179357/247‑1 (MQ=255) gctaCGCTTTCGGGATCA‑ACGGATACCTCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTctttgct < 1:359249/248‑1 (MQ=255) gcgACGCTTTCGGGAGCA‑ACGGATAACGCGGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTGCTGCCAGAGTAAGCAGCGTTGCCAGCTctttgct < 2:81174/251‑1 (MQ=255) tgcGGGACCA‑ACGGAAAACGCTGCCGCCAGCTCCTCCGCGCTAGTCACCCCCA‑CCGCCAGGTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGTGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGGTGCCAGCTCTTTGCTTTgcgc < 2:197648/247‑1 (MQ=255) ggggtccA‑ACGGATAACGCTGCCGCCACCTCCTTCGCTCTAGTCACCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTTTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTTCTCGGCa < 2:247491/245‑1 (MQ=255) cGGGATCC‑ACGGACACCGCTGCCGCCAGCGCCTTCGCGCTAGTAACCCCCT‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCa < 2:39973/251‑1 (MQ=255) ggATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGt > 1:111451/1‑251 (MQ=255) aTCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTc > 1:176353/1‑250 (MQ=255) cA‑ACGTATAACGCTGCCGCCACCTCCTTCGCGCTAGTTATCCCCG‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCTGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCGCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACg < 1:379825/251‑1 (MQ=255) cA‑ACGGAAAAAGCTGCAGCCAACTCCTTCGCGCTCGTCATACCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTGATCACGCCAGGCCAGACATTGCTGATGAGACGGTACAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGACCACGCAACATTTCTGCCATCGTAAGCAGCGTTGCCTGCACTTCGCTTTGCGCGGCTGTCACg > 2:156856/1‑251 (MQ=255) a‑aCGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCACCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGt < 1:51145/251‑1 (MQ=255) ggATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTtat > 1:187630/1‑251 (MQ=255) tAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAgg > 1:325341/1‑251 (MQ=255) aaCGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGc > 1:277460/1‑251 (MQ=255) ccAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGAGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGACtgagg > 1:295284/1‑250 (MQ=255) cctccgggcTAGTCACCCCCT‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTTTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGACTGAGTGAGTCt < 2:364629/244‑1 (MQ=255) ccTTCGCGCTAGACATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCAGCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGACTGAGTGAGTCt < 2:197129/251‑1 (MQ=255) tCGCGCTAGACATCCCCA‑CCGCCAGTTGGCGCCCCCAGATATATCGCGTCGTCCACAGCCACTGTTC‑GGTATCACGCCAGGCCAGACAGTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTGTGCTTTGCGCGGCAGTCACGTTATAGGCGGTACTGAGTGAGTCTTc < 2:57827/250‑1 (MQ=255) cgcgCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTACGCAGCGTTGCCGGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGACtgcggggagcttcgc > 2:128933/1‑238 (MQ=255) cgcTAGTCATACCCA‑CAGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGCCATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCCCATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGACTGAGAGAGTCTTTGCTg > 2:399062/1‑251 (MQ=255) gcTAGTCATCCCCA‑CAGCCAGTTTGCGACCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCCGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCggggcatggtgcgtctttcctgt > 2:346918/1‑231 (MQ=255) aGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGCGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGACtagaacgggagagccgcgggg > 2:63303/1‑231 (MQ=255) aGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGACt < 1:63303/231‑1 (MQ=255) cATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGACTGAGTGAGTCTTCGCTGTAATCg < 1:141589/250‑1 (MQ=255) cccA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGTCCACCGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGCAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGACTGCGGGAGTCTTTGCTGGAATcacaacg > 2:398837/1‑245 (MQ=255) aGTTTGCGCCCCCAGCTATAGCGCGTCGTCCCCAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGATGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGACATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGAGCGGCAGTCACGTTATAGGCGGGACAGGGGTTGTCTTCGCTGTAATccgagctcaaggagtc > 1:355519/1‑236 (MQ=255) gtgtgctcccccAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGTCATTGCTGATGAGAAGGTAAAAAAGGCAGGAACCGCTTTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGACTGAGTGAGTCTTCGCTGTAATCGAATCGCAGGTAGTcc < 2:399808/244‑1 (MQ=255) cccccAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAAGCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGACTGAGTGAGTCTTCGCTGTAATCGAAGCGCAGGGAGTCCGGATCCa < 1:163611/251‑1 (MQ=255) ccccAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GGTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGACTGAGTGAGTCTTCGCTGTAATCGAAGCGCAGGGAGTCCGGATCCat < 1:13659/251‑1 (MQ=255) cAGCTATAGCGCGTCGTCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGGATGGGTGAGGCTTCGCTGGAAACAAAGCGCACGGGGTCCGGGACCatat > 2:236247/1‑250 (MQ=255) | GGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGTCTCCACCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCA‑ACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCA‑CCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTC‑GTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCGCTGTAATGCACTGGCATCCGGGGTGATCGCGCTCACATGAACACGCAACCTTTCTGCCAGAGTAAGCAGCGTTGCCAGCTCTTTGCTTTGCGCGGCAGTCACGTTATAGGCGGGACTGAGTGAGTCTTCGCTGTAATCGAAGCGCAGGGAGTCCGGATCCATAT > NC_000913/3521946‑3522420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |