| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,494,720 | T→G | I237S (ATC→AGC) | nirB → | nitrite reductase (NADH) large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,494,720 | 0 | T | G | 98.4% | 215.5 / NA | 64 | I237S (ATC→AGC) | nirB | nitrite reductase (NADH) large subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base G (33/30); total (33/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGGTCTGGAAGCCGCAGGCGCGCTGAAAAACTTAGGTATTGAAACCCACGTTATCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTATCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGTCTGGTAGCACCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTG > NC_000913/3494478‑3494962 | aGGTCTGGAAGCCGCAGGCGCGCTGAAAAACTTAGGTATTGAAACCCACGTTATCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGtcttct > 1:259472/1‑251 (MQ=255) ggAAGCCTCAGGCGCGCTGAAAAACTTAGGTATTGAAACCCACGTTATCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCg < 2:202489/251‑1 (MQ=255) ggAAGCCGCAGGCGCGCTGAAAAACTTAGGTATTGAAACCCACGTTATCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCg > 1:62521/1‑251 (MQ=255) gcctcAGGCGCGCTGAAAAACTTAGGTATTGAAACCCACGTTATCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTAt < 1:324422/247‑1 (MQ=255) gCAGGCGCGCTGAAAAACTTAGGTATTGAAACCCACGTTATCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTAtccg < 1:83531/251‑1 (MQ=255) cgAAAAAGTTAGGTATTGAAACCCACGTTATCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATAGACAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCAAGCGTTTTGCCGCCGGCAGCGCACTGGAAGTCGACTTTAGCGTCTTCTATACCGGCATCCGTCCGCGCGa > 2:5363/2‑250 (MQ=255) gAAAAACTTAGGTCTTGCAACCCACGATATCGAATTTGCCCCTCTGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGAt > 1:388630/1‑250 (MQ=255) aaaaaCTTAGGAATTGCCAACCACGTTATCGACTTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACAACCTTACGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGACCTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCcgcgcgctac > 2:241720/1‑247 (MQ=255) aaCTTAGGTATTGAAACCCACGTTATCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCt > 1:220251/1‑251 (MQ=255) tGAAACCCACGTTATCGAATTTGCCACTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGGCTTTAGCGTCTTCTCTACCGGTATCCGTACGCGCGATAAGCTGGCAACCAAgt > 2:367806/1‑251 (MQ=255) gAAACCCACGTTATCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAgtg > 1:380994/1‑251 (MQ=255) ccACGTTATCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATaa > 1:115404/1‑231 (MQ=255) ccACGTTATCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATaa < 2:115404/231‑1 (MQ=255) aTCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGt > 1:27296/1‑251 (MQ=255) cGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGCGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGCCGTTg > 1:172497/1‑251 (MQ=255) cGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTg > 1:242600/1‑251 (MQ=255) tGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGCAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCcgc > 1:404211/1‑251 (MQ=255) ccTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTgg < 1:37889/251‑1 (MQ=255) ggCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACTCCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTTGAAGTCGACTTTAGCTTCTTCTCTACCGGTATCCGTCCGCGCGTTAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCGCCGCGTGGGGGt < 2:360862/250‑1 (MQ=255) gggCAGAAGAGCTTGCTCAGATTGGCGGCGATCAGCTGCGTCGCAAAAGCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTACAACCATGCGTGGTGCAGACGGCATCGAACTGTAAGTCGTCTTTAGCGGCTTCTCTACCGGTATCCGTGCGCGCGATAAGCTGTCACCCCACTGTGGTCTTGACTTTGCTCCGCGTGGGGGTAGTGTc < 2:36993/250‑1 (MQ=255) aaaaCAGCTTGGTGCGATGGGCGGGGAACAGCTTCGTCGCAAAATCGAAAGTAAGGGCGTGCGCGTTCCCACCAGCAAAAACACCCCTGAGATTGTGCAGGAAGGGGTTGAAGCGCGTAAAACCATTCGTTTTGCCGACGGCAGCTAACTGGAAGTCGACTTTAGCGTCTTCTCTACCTGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCTCGTGGGGGTATTGTCATTa < 2:123975/249‑1 (MQ=255) aaCAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGACAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGCGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTTTCATTAAt > 2:165204/1‑251 (MQ=255) cAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACTCCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACTGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACTGGTATCCGTCCGCGCGATAAGCTGGCATCCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGa < 1:399904/251‑1 (MQ=255) cAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCGTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGGCTTCTCTACCGGTAGCCGTCCGCGCGATAAGCTGGCAACCCAGAGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCAGTAATGa < 2:163643/251‑1 (MQ=255) aGCTTGATCAGATGTGCGGCGAGGAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCACGTTCACACCAGCAAAAACACCCTGGTGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGGCTTTAGCGTCTTCTCTACCGGTATCCGTCTGCGCGATAAGCTGGCTACCCATTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGAt < 1:167509/251‑1 (MQ=255) ttGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTcc > 1:155948/1‑251 (MQ=255) aTCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCATTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCAACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGc > 1:200673/1‑251 (MQ=255) cAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGcc < 1:223582/250‑1 (MQ=255) cgATGGGCGACGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCGGCGGGGGGGTATTGTCATTAATGATTCCTGca > 2:292861/2‑248 (MQ=255) cgAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTTAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTGTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGTACGTTGCTCCGCTTTGGGGTATTGTCATTAATGATTCCTGCCAGACTGCCGagc < 2:380994/251‑3 (MQ=255) agcagcTGCGTCGCAAAATCGAAAGTATGGTCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAATCCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCTTGGGGGTAGTGTCATTAATGATTCCTGCCAGACTTCCGATCCg < 2:112954/251‑1 (MQ=255) cagcTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGa < 1:212713/251‑1 (MQ=255) gCGTCGCAAAATCGAAAGTATGGTCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGTGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGatat < 1:223970/249‑1 (MQ=255) aaTCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTg < 1:94824/219‑1 (MQ=255) aaTCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTg > 2:94824/1‑219 (MQ=255) cGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGCCGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCCTTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGt < 2:61254/250‑1 (MQ=255) aGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGAGTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATg < 1:235952/251‑1 (MQ=255) gTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTg > 2:309725/1‑251 (MQ=255) tGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATc < 2:299130/224‑1 (MQ=255) tGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATc > 1:299130/1‑224 (MQ=255) ttCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGaacaac > 1:386789/1‑251 (MQ=255) tCACACCAGCAAAAACACCCTAGCGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGAGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGTAATCTACGCCATCGGTGAATGCGCCCGCTGGCACAAcc > 2:249144/1‑251 (MQ=255) cacaCCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAAcc < 1:86007/250‑1 (MQ=255) acacCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAACCgt > 1:31388/1‑251 (MQ=255) ccAGCAAAAACACCCTTGATATTGTGCAGGAAGGTGTTGAAGCGCGGAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGCCTTCCGACCCGGAGATCTACGCCATCGGTTAATGCGCAAGCTGGAACAACCGTGTa < 2:132921/251‑1 (MQ=255) cAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATTCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGtc < 2:176524/94‑1 (MQ=255) cAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGtc > 1:176524/1‑94 (MQ=255) aaaaCACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTGTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGt < 1:80557/251‑1 (MQ=255) cccTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCTATTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTTCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGGATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGTCTGGt > 1:13749/1‑250 (MQ=255) agaTTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGCACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGTCTGGTAGCACCt > 1:181238/1‑251 (MQ=255) aTTGTGCAGGAAGGTGTTGAAGCGCGTAAAAACATGCGTTTTGCCGAAGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGAGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATACACGCCATCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGTCTAGAAGCACCTgg > 1:146686/1‑251 (MQ=255) tGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGTCTGGTAGCACCTGGCTACAAAATGGCGCAg < 1:261604/250‑1 (MQ=255) gTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGAATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGTCTGGTAGCACCTGGCTACAAAATGGCGCAGGTCGCCGtt > 1:297916/1‑251 (MQ=255) acccATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTGAGCGTCGTCTCTACCGGTTGCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCAGCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGTCTGGTAGCACCGGGCTACAAAATGGCGCAGGTCGCCGTTGAcc < 2:204405/249‑1 (MQ=255) aaCCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGTCTGGTAGCACCTGGCTACAAAATGGCGCAGGTCGCCGTTGAcc > 2:298859/1‑251 (MQ=255) ccATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCAACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGTCTGGTAGCACCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCat < 1:235123/251‑1 (MQ=255) tGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTAACGGGATCCGTCCGCGCGCTAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGGGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGTTCCGGATATCTACGCCCTCGGTGCATGCGAAAGCTGGAACACCCGGGTATTTGGTCTGGTAGCACCTGGCTCCAAAATGGCGCAGGTCGCCGTTGGCCATAtt > 1:402699/1‑251 (MQ=255) cGTTTTGCCGACGGAAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCATCCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGAGCCGGATATCTACGCCATCGGTGAATGCGCAAGCTTGAACAACCGTGTATTTGGTCTGGTAGCCCCTGGCTAAAAAATGGCGCAGGTCGCCGTTGACCATATtct < 2:234956/251‑1 (MQ=255) ggtttGCCGACGGCAGCGAACTTGAAGTCGACTGTATCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTTGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTTGAACAACCGTGTATTTGGTCTGGTATCATCTGGCTATAAAATGGCGCAGGTCGTCGTTGGCCAGATtctc < 2:284862/249‑1 (MQ=255) tGCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGTCTGGTAGCACCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGt < 1:141158/250‑1 (MQ=255) gCCGACGGCAGCGAACTGGAAGTCGACTTTAGCGTCTTCTCTACCGGTATCCTTCCGCGCGATAAGCTGGCAACTCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACGTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACATGCGTGTATTTGGTCTGGTAGCACCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGTAg < 1:390743/251‑1 (MQ=255) cGAACTGGCAGTCGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGCACAACCGTGTATTTGGTCTGGTAGCAACTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCt > 2:43165/1‑251 (MQ=255) aaGTCGACTTTCGCGACTTCTCTAACGGTATCCGTCCGCGCGATACGCTGGCAACCCCGTGTGGTCTGGACGTTGCTCCGCGTGGGGGGATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCCTCGGTGAATGCGCCAGCTGGAACAACCGTGTATTTGGTCTGGTAGCCCCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCCTATTCTCGGTAGCGAAAACGCCTTTGAAGGt > 2:407346/1‑251 (MQ=255) cGACTTTAGCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGTCTGGTAGCACCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTg > 1:217891/1‑251 (MQ=255) | AGGTCTGGAAGCCGCAGGCGCGCTGAAAAACTTAGGTATTGAAACCCACGTTATCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTATCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGTCTGGTAGCACCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTG > NC_000913/3494478‑3494962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |