Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 3,127,343 | G→A | L227L (CTG→TTG) | glcD ← | glycolate dehydrogenase, putative FAD‑linked subunit |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,127,343 | 0 | G | A | 98.7% | 244.0 / NA | 77 | L227L (CTG→TTG) | glcD | glycolate dehydrogenase, putative FAD‑linked subunit |
Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (35/40); total (36/41) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 |
ACCCGCTCGCAGTCTTCCTGTACGTCAGACTCCACGCCGTCCAGCTCGCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGTTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCAGCCACATTGCCGCCAATGGAACAGGCGATTTGTGAGGAAGGGTCCGGTGC > NC_000913/3127096‑3127589 | aCCCGCTCGCAGTCTTCCTGTACGTCAGACTCCACGCCGTCCAGCTCGCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAAttt > 1:190459/1‑251 (MQ=255) cGCAGTCTTCCTGTACGTCAGACTCCACGCCGTCCAGCTCGCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGt < 1:313394/250‑1 (MQ=255) gtaGTCTTCCTGTACTGCCGACTCCAAGCCGTCCAGCTCTCATAACCAAATCGCTTCGGCGGCGACGGGATAACTGGCATGAATAAAATCGTCCGCCGCGCGGATCTACAGGTTTTCCATCATCTCCAGCCCGCCGGGGATAATGCCAATGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTCCCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTGGGCATCAAGTTTACCGTCa < 2:398816/249‑1 (MQ=255) gCAGTCTTCCTGTACGTCAGACTCCACGCCGTCCAGCTCGCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTAACCAACCGCAAGTCCGGCTTTTTCTACCGCGTCAAAGCTGGCTAACAGCACCCGCGCCACGGGCGGCTTCGGCAGCATTTTTACCGTc > 2:272373/1‑250 (MQ=255) gTCTTCCTGTACGTCAGACTCCACGCCGTCCAGCTCGCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACtt < 1:382160/251‑1 (MQ=255) tCCTGTACGTCAGACTCCACGCCGTCCAGCTCGCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTc < 1:301492/248‑1 (MQ=255) gTACGTCAGACTCCCCGCCGTCCAGCTCGCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGTATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCggtgg < 1:296626/249‑1 (MQ=255) gTACGTCAGACTCCACGCCGGCCAGCTCGCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCggtgg < 2:107077/249‑1 (MQ=255) aCGTCAGACTCCACGCCGTCCAGCTCGCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGACCCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCAc > 1:97629/1‑251 (MQ=255) aCGTCAGACTCCACGCCGTCCAGCTCGCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCa < 1:92486/250‑1 (MQ=255) cGTCAGACTCCACGCCGTCCAGCTCGCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACg < 1:404879/251‑1 (MQ=255) tCCAGCTCGCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCg > 1:125189/1‑250 (MQ=255) tCCAGCTCGCATAACAAAATCGCTTCGGCGTCGACGAGATAACCGGCATACATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTACAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCAGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGACCCCGCGCCCCGAGCAGCTTCGGCAGCAATTTTACCGTCACTGCAGTGGTCACGCCGAGCATACCTTcctc > 2:69363/1‑249 (MQ=255) cGCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCAGACCTTCCGATCCgg < 1:315292/249‑1 (MQ=255) gCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTg > 2:78904/1‑250 (MQ=255) ccATAACAAAAGCGCTCCGGGGTCTACGGGCTAACCGGCATGAATAAAATCTTCCGCCGCGCGTATCGACAGGTTATCCATCATCTCCGGCCCGCCGGGGATAAGGCCAGTGGCGATGATTTCTCCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCGGGCTAACAGAACCCGCGCCTCGTGCGGCTTCGGCAGCAGTTGTACCGTCACGTCGGTTGTCACTCCGAGGAGACCGTCCGATCCGGTGa < 2:372295/250‑1 (MQ=255) aaCAAAATCTCTTCGGCGTCGACGGGATACCCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAATCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATTCCTTCCGATCCTGTGAACa < 2:263646/250‑1 (MQ=255) aCAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAgc < 1:114185/251‑1 (MQ=255) aaaaTCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAgcgc > 1:363213/1‑251 (MQ=255) aTCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGcc > 1:120260/1‑249 (MQ=255) gCTTCGGCGTCGACGGGATAACCGGCATGAATACAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGACCTCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACAGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACTGTCACTTCGGTGGTCACGCCGAGCATACCTTACGATCCgacgaaccacgccagc > 2:294076/1‑234 (MQ=255) gCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCcagcag < 2:190459/251‑1 (MQ=255) cggcctctaCGGGATAACCGGCATGAATAAAATCTGCCGCCGCGCGGATCGCCAGGTTATCCATCATCTCCAGCCCGCCGGGGATAAGGCCATTGGCGATGATGGCTCCAACCGCAAGTCCGGCGGTTGCTACCGAGTCAAAGCTGGCTAACAGTGCCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGGCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCa < 2:281729/243‑1 (MQ=255) cGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCaaaa < 1:388615/251‑1 (MQ=255) gACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAAcc > 1:336896/1‑249 (MQ=255) cGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGt < 1:78904/251‑1 (MQ=255) gggATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCCTTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGAAGCAATTTTACCGTCACTTCGGTGGACACGCCGAGCATACCTTCCGATCCGGAGAACAGCGCCAGCAGGTCAAAACCAGGTg > 1:283674/1‑251 (MQ=255) gCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGCGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAgcgc > 1:411170/1‑251 (MQ=255) gAATAAAATCTTCCGCCGCGCGGTTCGACAGGTTATCCATCATCTCCAGCCCGCCGGGTATAATGCCAGTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGATTCAAAGTTGGCGACCAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTGTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCTGGTCAAAACCAGGTGAATCCAGCGCGTc < 2:315024/250‑1 (MQ=255) aaTAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCg < 1:119236/251‑1 (MQ=255) aaaaTCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGCTCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGGAAATCCAGCGCGTCCGATc > 1:339096/1‑251 (MQ=255) aTCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATACTGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGCGAATCCAGCGCGTCCGATCCa > 2:150153/1‑250 (MQ=255) ttCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGAGAATCCAGCGCGTCCGATCCAAGCg > 2:113323/1‑251 (MQ=255) cgcgcgGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATATCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGCGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAAACAGGTGAATCCAGCGCGTCCGATCCAAGCGTAAGt > 2:149919/1‑250 (MQ=255) cgcgGATCGACCGGTTATCCATCATCACCAGCCCGCCGGGGCTAATGCCATTGGCGATGATCTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTAAAAGCAGGCTAACAGAACCCCCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGACACGCCGGGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAACACCAAGTGCAACCAGCGCGTCCGATCCCAGCGTCAGTGcc > 2:291361/1‑251 (MQ=255) cgGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTc < 1:171740/251‑1 (MQ=255) cgGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTc > 2:313363/1‑251 (MQ=255) aTCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGTCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGcc < 1:418619/251‑1 (MQ=255) cGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCg < 1:378210/250‑1 (MQ=255) ggTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCCAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGACTCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGc > 2:131736/1‑251 (MQ=255) tCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTg > 1:288819/1‑251 (MQ=255) catcGCCAGCCCGCCGGGGAGAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCGGTTTTTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTGCGGCAGCAATTTGACCGTCACGTCGGTTGTCTCGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACtt < 1:188785/251‑1 (MQ=255) tctcCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCAGTCCAGCGTTTGCACTTc > 1:188323/1‑250 (MQ=255) ccgccgGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTcag < 1:17590/251‑1 (MQ=255) cgccgGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACACCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGAGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAGTTTTaagc > 1:21618/1‑251 (MQ=255) ggggATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTTAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAg < 2:339752/225‑1 (MQ=255) ggggATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTTAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAg > 1:339752/1‑225 (MQ=255) aaTGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGt < 1:129008/250‑1 (MQ=255) cctgggggatgagGTCACCAGCCGCAAGTCCGGCTTTTGCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCATCAAGTTTACCGGCACTTCGGTGGTCACGCCGAGCATATCTGCCGATCCGGTGAACAGCGCCAGCAGGTCAAATCCAGGTGAATCCAGCGCGTCCGATCCAAGCGGCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGTTTATGTACGGTc < 2:357443/244‑1 (MQ=255) cATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTc > 1:398594/1‑251 (MQ=255) aTTGGCGATGATGTCACCAACCGCACGTCCGGCATTTTCTAACGCGTCCAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAAATTTACCGCCCCTTCGGTGGTCACGCAGAGCATACCTTCCGATCAGGTGAACAGCGCCAGCAGGTCAAAACCAGGGGAATCCAGCGAGTCCGATCCAAGCGTCAGTGCCTCGCCGACCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTc > 2:205816/1‑250 (MQ=255) ggCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGAc > 1:88530/1‑251 (MQ=255) tCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTc > 1:196792/1‑249 (MQ=255) aaCCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGt > 1:41452/1‑251 (MQ=255) aaCCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGAACTTCAATTTTCAGCAGATTATGTACGGTCAGACCATATTTCAGGCAGt > 1:97229/1‑251 (MQ=255) cAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGAcg > 2:91134/1‑251 (MQ=255) aaGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGAcgc > 1:249444/1‑251 (MQ=255) gCTTTTTCTTCCGAGTCAAAGCTGGCTAACAGGCCCCGCGCCACGGGCGGCTTCGGCAGCAATTTTTCCGTCTCTTCGGTTGTCACGCCGAGCATACCTTCCGTTCCTGTGAACATCGCCAGCAGGGCAAAACCAGGTGAATCCAGCTTGTCCGATCCAAGCGACAGTGCCTCGCCGTCCAGCTGTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGc < 1:266948/251‑1 (MQ=255) ttCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCAttt < 1:91134/250‑1 (MQ=255) aCCGAGTCAAAGCTGGCTAACAGAACCCGCGCCCCGGGCTGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGACAGACCATATTTCAGGCAGTGGACGCCGCCTGCATTTTCa < 2:402954/249‑1 (MQ=255) aCCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCa < 1:272373/249‑1 (MQ=255) aatcaaaactgtttaccAGACCCCGCGCCACGGGCTGCTTCCGAAGCAATTTTCCCGGCACTTCGGTGGTCACGTCGAGCATACCATCCGATCCGGTGAACAGCGTCCTCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGGCTCGCCTTCCAGCGTTTGCACTTCAATTTTCAGCCGGTTATGTACGCACAGACAAGATTGCAATCAGTGGTCGCCGCCTGCATTTTCAGCcaca < 2:259740/235‑1 (MQ=255) gTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCAGCCACAt > 1:39307/1‑251 (MQ=255) aaGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCAGCCACATTgcc < 1:144566/251‑1 (MQ=255) aGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCAGCCACATTgccg < 1:131736/251‑1 (MQ=255) gCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCAGCCACATTgccgc > 1:85053/1‑251 (MQ=255) tGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGGCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCAGCCACATTgcagcc > 2:227384/1‑250 (MQ=255) accccGCGCCACGGGCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCAGCCACATTGCCGCCAATGGAACAgg < 1:225765/249‑1 (MQ=255) aaCCCGCGCCACGGGCGCCTTCGGCAGCAATTTTGCCGTCACGTCGGTGGTCACGCCGAGCATACCTTCCGATCCGTTGAACAGCGCCAGCAGTTCAAAACCAGTTGAATCCATCGCGTCCGTTCCAAGCGTCAGTGCTTCGGCGTGCATCGGTTGCACTTCAATTTTCAGCGGGTTATGTGTGGTCATACCATATTCCAGGCAGTGGTCGCCGCCGGCATTTTCAGCCACATTGCCGCCAATGGAACAgg < 1:201107/251‑1 (MQ=255) ctccACGGGCGGCTTCTGCAGCAATTTTACCGTCACTTCGGTGGTCACACCGAGCATACCGTCCGATCCGGTGAACAGCGCCGTCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAACGGCAGTGCCTCGCCGTCCAGCGTTAGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCAGCCGCATTGCCGCCAATGGAACAGTCGAt < 1:305579/247‑1 (MQ=255) ccACGGGCGGCTTCGGCAGCCATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGACTCCACCGCGTCCGATACACGCGTCAGCGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCAGCCACATTGCCGCCACTGGAACAGGCGATTtgg > 2:249443/1‑250 (MQ=255) cGGGCGTCGTCGGCAGCAATTTTACCGTCACTGCGGGTGTCACGCCGAGCAGACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCCGCGCGTCCGATCCAAGCGTCTGTGCCTCGCCGTCCAGCGTTTGCACTTCAATGTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGTAAGTGGACGCCGCCGGCATTTTCAGCCACATTGCCGCCAATGGAACAGGCGATTtgtg < 2:352024/249‑1 (MQ=255) gggCGGCTTCGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGAGCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCAGCCACATTGCCGCCAATGGAACAGGCGATTTGTGAgg < 2:213761/251‑1 (MQ=255) gcTTCGGCAGCAATTTTACCGTCACTTCGGGGGTCACGCCGAGCATCCCTCCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGGTCCTAGCTTCAGTGCCGCGCCTTCCAGCGGTGGCACTTCAAGTTTCAGCTGGTGATGTAGGTTCAGACCATATTGCAGGGATTGTACGTTGCTGGCGGTTTCAGCCACATTGCCGCCAATGGAACAGTCGATGTGTTAGGaaagg < 2:28784/251‑4 (MQ=255) cGGCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCTTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTGCATCCACATTGCCGCCAATGGAACAGGCGATTTGTGAGGAAAGGTCCg < 1:412799/251‑1 (MQ=255) ggCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCAGCca > 1:34779/1‑208 (MQ=255) ggCAGCAATTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCAGCca < 2:34779/208‑1 (MQ=255) agcaaTTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCATGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCAGCCACATTGCCGCCAATGGAACAGGCGATTTGTGAGGAAAGGTCCGGTGc > 1:133452/1‑251 (MQ=255) | ACCCGCTCGCAGTCTTCCTGTACGTCAGACTCCACGCCGTCCAGCTCGCATAACAAAATCGCTTCGGCGTCGACGGGATAACCGGCATGAATAAAATCTTCCGCCGCGCGGATCGACAGGTTATCCATCATCTCCAGCCCGCCGGGGATAATGCCATTGGCGATGATGTCACCAACCGCAAGTCCGGCTTTTTCTACCGAGTCAAAGCTGGCTAACAGAACCCGCGCCACGGGCGGCTTCGGCAGCAGTTTTACCGTCACTTCGGTGGTCACGCCGAGCATACCTTCCGATCCGGTGAACAGCGCCAGCAGGTCAAAACCAGGTGAATCCAGCGCGTCCGATCCAAGCGTCAGTGCCTCGCCGTCCAGCGTTTGCACTTCAATTTTCAGCAGGTTATGTACGGTCAGACCATATTTCAGGCAGTGGACGCCGCCGGCATTTTCAGCCACATTGCCGCCAATGGAACAGGCGATTTGTGAGGAAGGGTCCGGTGC > NC_000913/3127096‑3127589 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |