| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,112,119 | G→A | R311C (CGC→TGC) | yghF ← | putative type II secretion system C‑type protein YghF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,112,119 | 0 | G | A | 98.4% | 202.8 / NA | 62 | R311C (CGC→TGC) | yghF | putative type II secretion system C‑type protein YghF |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (24/37); minor base C (1/0); total (25/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
AAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCGCGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGCACAGGCGTAAGCTGGATATAGTTAAAAATTTTCTGCGGATC > NC_000913/3111884‑3112359 | aaaCCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTaa < 1:279012/251‑1 (MQ=255) aCCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGAGATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGGCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTaaaa < 1:134641/251‑1 (MQ=255) ggACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAAt > 1:310845/1‑251 (MQ=255) cATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGa < 1:9201/251‑1 (MQ=255) aTCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGCTGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGa > 2:300388/1‑250 (MQ=255) aTCCAGTCCGGCGCGACGGTAGCGCGGGTGAGGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGaa < 2:349357/251‑1 (MQ=255) cAGTCCGGCGCGACGGTAGCGCGTGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGTGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATcc < 1:368143/251‑1 (MQ=255) aGTCCGGCGCGACGGTAGCTCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCa < 1:9604/251‑1 (MQ=255) gACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTa > 1:199775/1‑250 (MQ=255) aCGGTATCGCTGGTGATGCCGGTTGCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTTGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCGCTTCGTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAAGGTCGAGGCACGCACCCTTGCGTAAAACCTTAAGTTGAATGGAATCCAGTGAAGGTAAc < 2:393038/251‑1 (MQ=255) cGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACt < 1:203865/251‑1 (MQ=255) ggTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGGTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTTAATGGAATCCATTGAAGGTAACTg < 2:286811/251‑1 (MQ=255) gTAGCGCTGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGc < 2:226634/251‑1 (MQ=255) gggTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATc > 1:9084/1‑250 (MQ=255) gTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGATCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTCAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATc > 1:252980/1‑248 (MQ=255) gTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCAt < 2:187714/251‑1 (MQ=255) tCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCt > 2:289809/1‑251 (MQ=255) cggCAACCTCTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCg < 2:78921/249‑1 (MQ=255) gCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGt < 1:336147/250‑1 (MQ=255) gCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTg > 2:298756/1‑251 (MQ=255) gCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTg < 2:9084/251‑1 (MQ=255) atccACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATTTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGa < 2:30688/249‑1 (MQ=255) aaCCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCGTTGAAGGTAACGGCCGCATCAGAGCAATCATTGCTCGTGGa < 1:145154/251‑1 (MQ=255) aCCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGAt < 1:339141/251‑1 (MQ=255) gcgcAATGTTGCGCATATGCTGTTGGTGAATCCCTGCTACGGTTGCCCGTTGTTGGTCGATATTCATCGGGGCGAAATGCAGTTTATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGa < 2:226641/251‑1 (MQ=255) gcgcATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCctgctg > 1:198884/1‑251 (MQ=255) cgcATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGa < 1:15067/251‑1 (MQ=255) cATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGCTATTCAACGGGGCGAAATGCCGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGAtt > 2:27942/1‑251 (MQ=255) atGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTa < 1:30432/250‑1 (MQ=255) ggTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACTGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATgg < 1:266282/251‑1 (MQ=255) gAATCACTGCTTCGGTTGCCAGTTGCTTGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCTATGGAAATGTCGTGGCACGCCCCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTATCTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGa < 2:146269/251‑1 (MQ=255) ggTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCCCGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGccttcctt > 2:106820/1‑251 (MQ=255) tGCCAGTTGCTGGGCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGGCGGTAGCTCAGCGCGATGGAAATGCCGTGGCACGCTCCCTTGCGTAAAACCGTAATTTGAATTGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGa < 1:408790/250‑1 (MQ=255) tCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCg > 2:399461/1‑251 (MQ=255) cGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCg > 2:256535/1‑250 (MQ=255) tCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACaga < 2:314392/250‑1 (MQ=255) aaCGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAAGGGCGATATCGCCTTCCTTGAAACCGCTGGCAGCGAACAGAGaa < 1:313167/251‑1 (MQ=255) ggggCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGa < 2:73484/251‑1 (MQ=255) aaTGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGccc > 2:359801/1‑251 (MQ=255) cAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGGCGGTAGCGCAGCGCGATGGAAAGGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAAGGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCgg < 1:56877/251‑1 (MQ=255) tCATCGATATCCGGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGAGCTGCCCCCGGCtt < 2:138672/250‑1 (MQ=255) cGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTg > 2:322526/1‑251 (MQ=255) cGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTg > 2:46038/1‑251 (MQ=255) atatCCTGGTTCAGCTGTTCTTCCAGTAAGGCGGGAAGAATAGTCGGTAGCGCAGCGCGCTGGAACTGACGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAAACCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGCTCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGACCGATCTGCCCCCGGCTTCGCTGc > 2:357571/1‑250 (MQ=255) tcCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTGGAATGGAATCCATTGAAGGTAACGGCCGCATCAGAGCAATCATTTCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTGCGCTGCATAACCGACAATCCCCTCCtt < 2:242260/250‑1 (MQ=255) aaGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAGTGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAAGCCTGCTGATTTAGCGCAATGGCGATATCGCCGTCCTTGAAACCTCTGGCATCGAACAGAGAACTATCGGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGcaca < 1:397368/251‑1 (MQ=255) aaGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGcaca < 1:56349/251‑1 (MQ=255) aaGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGcac > 1:376951/1‑250 (MQ=255) aaGGCGGGCAGAATAATCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGcac > 1:226017/1‑250 (MQ=255) aGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGACCGCTCTGCCCCCGGCTTCGCTGCCTAACCGCCAATCCCCTCCTTACGcac > 1:179185/1‑249 (MQ=255) ggCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGCACAgg < 1:300388/251‑1 (MQ=255) aTAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGCACAGGCGTAAGCTgg < 1:289809/251‑1 (MQ=255) aTAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGCACAGGCGTAAGCTgg < 1:77181/251‑1 (MQ=255) aGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGCACAGGCGTAAGCTGGat < 2:7950/251‑1 (MQ=255) gTCGGTAGCGCAACGCGATGGAAATGTCGCGGCAAGCACCCTTTCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGAGGATCAGTGAAATCCTGCTGATTTAGCGCAATGCCGATATCGCCTTCCTTGAAACCGCTGGCCTCGAACAGAGAACGATCTGCCCCCAGCTTCCCTGCATAACCGACAATCCCCCCCTTACGCCCAGACGTCACCTGGat > 2:192279/1‑250 (MQ=255) gTAGCGCAGCGCGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGCACAGGCGTAAGCTGGATATAGt > 1:276925/1‑251 (MQ=255) cgcagcgcGATGGAAATGGCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGCACAGGCGTAAGCTGGATATAGTTaaa < 2:392619/251‑1 (MQ=255) agcgcGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGCACAGGCGTAAGCTGGATATAGTTAAAAAt < 1:359801/251‑1 (MQ=255) agcgcGATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGCACAGGCGTAAGCTGGATATAGTTAAAAAt > 1:48932/1‑251 (MQ=255) cgcgATGGAAATGTCGTGGCACACACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGCACCGGCGTAAGCTGGATATAGTTAAAAAttt > 1:116343/1‑251 (MQ=255) gATGGAAATGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGCACAGGCGTAAGCTGGATATAGTTAAAAATTTTCt > 2:343378/1‑251 (MQ=255) aTGTCGTGGCACGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGCACAGGCGTAAGCTGGATATAGTTAAAAATTTTCTGCGGATc > 1:301464/1‑251 (MQ=255) | AAACCCACAAGGAATGGACATCCAGTCCGGCGCGACGGTAGCGCGGGTGATGCCGTTTTCCTGCAACCACTGCGCAATGTTGCGCATATGCTGTTGGTGAATCACTGCTACGGTTGCCAGTTGCTGGTCGATATTCAACGGGGCGAAATGCAGTTCATCGATATCCTGGTTCAGCTCTTCTTCCAGTAAGGCGGGCAGAATAGTCGGTAGCGCAGCGCGATGGAAATGTCGTGGCGCGCACCCTTGCGTAAAACCGTAAGTTGAATGGAATCCATTGAAGGTAACTGCCGCATCAGAGCAATCATTGCTCGTGGATCAGTGAAATCCTGCTGATTTAGCGCAATGGCGATATCGCCTTCCTTGAAACCGCTGGCATCGAACAGAGAACGATCTGCCCCCGGCTTCGCTGCATAACCGACAATCCCCTCCTTACGCACAGGCGTAAGCTGGATATAGTTAAAAATTTTCTGCGGATC > NC_000913/3111884‑3112359 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |