| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,850,542 | C→T | G62D (GGT→GAT) | uhpA ← | DNA‑binding transcriptional activator UhpA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,850,542 | 0 | C | T | 93.9% | 174.5 / NA | 69 | G62D (GGT→GAT) | uhpA | DNA‑binding transcriptional activator UhpA |
| Reads supporting (aligned to +/- strand): ref base C (1/2); major base T (34/28); minor base G (0/4); total (35/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTAAAAAAAATACGCGCTTACCT > NC_000913/3850299‑3850765 | cGTTCCCGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATAACCGGCGTCAGATAACAGCCGCCCGTTGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCGGGCTTAGCAGCTCCAGATCGGAGat < 2:346625/251‑1 (MQ=255) tCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGAGCCTGCTCAACCAGCGCAGGACAGTCGTGAACGGAGTGCATAATAGTCGCCATACCTTTCGGAAGCTGGCTTGGCAGCTCCAGATCGGAGatttc > 2:117432/1‑248 (MQ=255) aCGTTTGGTTAGCGGGTCCTGACGACCGGCTGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCgg > 1:131556/1‑251 (MQ=255) cGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCggg < 2:28867/251‑1 (MQ=255) tAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATgg > 1:142248/1‑248 (MQ=255) aGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGATATATCGGGCATGGAGat < 1:338727/251‑1 (MQ=255) aGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGgaga < 1:145581/250‑1 (MQ=255) aGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTGCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGGGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGTCATGgaga < 2:71542/250‑1 (MQ=255) cGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCTGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCAGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGatat < 2:55719/251‑1 (MQ=255) ggTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCg < 1:359692/251‑1 (MQ=255) ccTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGCAAGAAAGCCGCGTGCCCCCGCGTTACGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGTGCATGGAGATATCGCa > 2:183671/1‑250 (MQ=255) ccGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATacacac > 2:114262/1‑251 (MQ=255) cGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACAcc > 2:59600/1‑251 (MQ=255) tAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGACCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCgcgc > 1:201252/1‑251 (MQ=255) aaTGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGCCTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGcc > 2:32416/1‑251 (MQ=255) aaTGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGcc > 1:66561/1‑251 (MQ=255) ggCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATAGCGCAAATACACACCTGCACACCGCGCCCCg < 2:309355/251‑1 (MQ=255) ggCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAAACGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAGAAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACGGTCGTGAACGGAGAGCATAATCGTCGCCATACGTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGCGACTGCGCAAATACACACCTGTACACCGCGCCCCg > 2:120071/1‑251 (MQ=255) cggcAGATAACAACCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGGGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGATCGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCa < 2:109052/248‑1 (MQ=255) gTCAGAGAACAGCCGCCCGGGGCAACCGGATGCCCCTCAGCAAGGAGTTCATCCGGGCTAAAGAGTTTGGAAAGAAAGCCGCGCGCCCCCGCGTTAAGGGCCGGCTCAACCAGCGCAGGACTGGCGCGAACGGAGGGCATAATCGACGCCATACCTTTCGGCAGCTGGCCTAGCAGCTCCAGACCGGAGATATCGGGCAGGGAGATATCGCAAATACACACCGGCACACCGCGCCCCGGCAGCCCCGCCAg < 2:362375/251‑1 (MQ=255) tCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCACTGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGCGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAgc > 2:98948/1‑251 (MQ=255) aTAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCt > 1:114882/1‑251 (MQ=255) aTAACAGCCGCCCGGGGCAACAGTATGCACCGCAGCAATGAGAACATCCGAGCTACAGCGTTTGGTAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCGGCTCAACCAGCGCAGGACTGTCGTGAACGGAGATCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATAGGTCATGGAGATATCGCCACTACACACCTGCACACCGAGCCCCTGCAGCCCCGCCAGAGccc > 2:302342/1‑250 (MQ=255) ccgccCGTGTCAACCGTATGCCCCGCAGCAATGAGTCAATCCGGGTTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGACCGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGAGCGGAGATATCGGGCATGGAGATATCGCAAATACACTCCTGCACACCGCGCCCCGGCATCCCCGCCAGCGCCTCGCGccc < 1:348588/251‑1 (MQ=255) cGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAAc > 1:114421/1‑251 (MQ=255) aCCGAATGCACCGAAGCAATGAGTCCATCCGGGCTACATCGTTTGGAAAGAAGTCCCCGTTCCCCCGCGTGACGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAACCGTCGCCATCCCTTCCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATTTCGGGCATGGAGATACCGCAAATACCCACCTGCACACCGCGCCCCGGCGGCCCCGCCAGCGCCTCGCGCCCCGAACCAAAcgc < 2:318851/251‑3 (MQ=255) gTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGACTGCTCAACCAGCGCAGGAATGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTCGCAGCTCCAGATCGGAGTTATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCACCGGCAGCCACGCCAGCGCCTCGCGCCCCGAACCAAACTCgac > 1:383904/1‑249 (MQ=255) gCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACt > 1:390271/1‑251 (MQ=255) gCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACt < 1:55874/251‑1 (MQ=255) aCCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAAGACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTAc < 1:290669/251‑1 (MQ=255) ccGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTAcc < 1:2374/251‑1 (MQ=255) ccagcaAGGAGTTCAGCCGGGCTACAGCGTTGGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTg < 2:393556/250‑1 (MQ=255) gTTCATCCGGGCTACAGCGTTTGGCAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGACCCAAACTCGGCCACTACCTGCAAATCAGGt > 2:351905/1‑251 (MQ=255) gTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGAGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCCTACCTTTCGGCACCTGGCTTAGCAGCTCCAGATCGGCGATCTCGGTCATGGAGATATCGCAACTACACACCTGCACACCACGCCCAGGCACCCCCGACAGCAACACGCGCCCTGGACCAAACTAGCCAACAACCTTCAAATccagt > 2:271468/1‑247 (MQ=255) cATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCCCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATAGCGGGCAGGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCTCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTcc < 1:32416/251‑1 (MQ=255) ccGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGc > 1:98702/1‑251 (MQ=255) ggcttACAGGGTTTGGAAAGAAAGCCGCGGGCCCCCGCGTTAAGCGCCTTCCCAACCAGCGCGGGACTGTCGTGAACGGAGAGCATATTCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGAAAATACACCCCTGCACCCCGCGCCCCGGCAGTCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAACTCAGGTTCCAGccc < 2:277901/247‑1 (MQ=255) gTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGCCTGTCGTGAACGGAGAGCAGAATCGCCGCCATCCCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCGGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTgc < 2:142248/251‑1 (MQ=255) ttGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAGCCAGCGCAGGACTTTCGTGAACGTAGAGCAAAATCGTCGCCTTACCTTGCGGCAGCGGGCTTAGCAGCTCCAGATCGGAGATTTCGGGCATGGATATATCGCAAATACACACCGGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGGTCCAGCCCCAGCAGCTgcg < 2:360511/250‑1 (MQ=255) gaaaagccgtgtccctcagcgTTAAGCGCCTGCACAACCAGCGCAGGACTGTCGTGAACGTAAAGCGTAATCGTCGCCAGTCCTTTCGGCAGCTGGCTGAGCAGCTCCAGAGCGGAGAAATCGGGCAGGGAGATAGCGCAAATACACCCCGGCACACCGCGCCCGGGCAGCCCCGCCACCGCCTCGCGCCCCGAACCAAACTCTGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGcc < 1:41461/233‑1 (MQ=255) agaaagCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGCCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGcc > 1:23799/1‑251 (MQ=255) gaaagCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCg > 1:69823/1‑251 (MQ=255) aaaagCCGCGTGCCCCCGCGTTAAGCGCATGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGAGCGGAGATATCGGGCATGGAGATAGCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCg < 1:121255/250‑1 (MQ=255) ccGCGTGCCCCCGCGTTACGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCg > 1:338761/1‑251 (MQ=255) gcctccgcgtataGCGCCGGCTAAACAAGCGCAGTACTGTCGTGAAGGGAGAGCATAATCGTCGCCATCCCTTTGGTCAGCTGGCTTAGCAGCTCCAGCTCGGATAGATCGGGCATGGAGATACCGCAAATACACATGTCCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTGCCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGAt < 1:42645/239‑1 (MQ=255) gTTAAGCGCCTGCTCAACCATCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGCTATCGCAAATACACACCTGCACACCGCGACCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGAt > 2:32577/1‑251 (MQ=255) cgcacgaCCAGAGCAGGACTGTCGTGAACTGAGTGCATTCTCGTCGCCTTCCCTTTCGCCAGCTGGCTAAGCAGCTCCATATCGTAGATAGCGGGCATGGAAAGATCGCAAAGCCACCCCTGCCCACCACTCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGATCGGACGATGAGGTGATTGTCTATAAg < 2:121094/245‑1 (MQ=255) cTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAggg > 1:4994/1‑251 (MQ=255) aCCAGCGCAGGACTGTCGTGAACGGAGCGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGATCCAGCTCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCACCGGCAGCCCCGCCAGCGCCTCGCACCCCGCCCCAACCTCGGCAAATACCTGATACTCAGGTTCCAACCCCAGCAGCTGCGCAAAGACGGAGCGGCCGAAGAGGTGATCGTCTATAAGGGCAAc > 1:181385/1‑251 (MQ=255) ccAGCGCAGGCCTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACg > 2:354330/1‑251 (MQ=255) gcAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGCTATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAACCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTTTAAGGGCACCGGTgct > 2:284079/1‑249 (MQ=255) cAGGACTGTCGGGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCTCACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATc < 1:28839/251‑1 (MQ=255) aGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATc > 1:50716/1‑250 (MQ=255) cattcgggAACGGAGAGCATAACCGGCGCCATCCCTTTCGGCAGCTGGCTTAGCAGCTCCAGAGAGGAGATTTCGGGCATGGCGATATCGCAAATACACCCCTTCACCCCGCGCCCCGCCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTTCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAGGCCGGAGCGGACGATGAGGTGAGCGTCTATAAGTGCAACGGTGATCATGGt < 2:247189/244‑1 (MQ=255) cTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGt > 1:281489/1‑251 (MQ=255) gTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCt < 1:174221/251‑1 (MQ=255) ccggtaactgagaGCATAATCGGCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGCGATATCGTGCATGGATATATCTCAAATACTCTCCTGCACACCGCGCCCCGGCATCCCCGCCAGCGCCTCGCGCCCCGAACCAAACACGGGAACTAGCTGCGAATCAGGGTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAATGGCAACGGTGATCATGGTCtt < 1:399170/242‑1 (MQ=255) cgggAACGGAGAGGATAATCGTCGCCCTCCTTTTCGGCGGCTGGCTTAGCACCCCCAGTTCGGATATATCGGGCATGGAGATACCGCAAATACCCCCCTGCACCCCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGGCTATAAGGGCAACGGTGATCATGGTCtt < 2:37228/247‑1 (MQ=255) cGGAGGGCATAATCGTCGCCATACCTTTCGGCAGTGGGCTGAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATCCCCACCGGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGTACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTgg < 2:376788/251‑1 (MQ=255) cGGAAAGCAAAATCGTCGCCATTCCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATTTCGCAAATACCCACCTGCACCCCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTgg < 2:69823/251‑1 (MQ=255) ggAGAGCATAATCGTCGCCATGCCTTGCGTCAGCGGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTTTTCGGCTATAAGGGCAACGGTGATCATTGTCTTGTCCTGGc < 2:212594/251‑1 (MQ=255) ggAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGCGATATCGGGCATGGAGATATCGCAAACACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGCACCAAACTCGGCAACTACCTGCCAATCAGGTTCCAGCCCCAGCAACTGCGCAAAGCCGGAGCGGAAGAAGAGGGAATGGTCTATAAGGGCAACGGTGATACTGGGCTTGTCCTggg > 2:330295/1‑250 (MQ=255) ggAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCtat > 1:16788/1‑219 (MQ=255) ggAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGc > 1:223944/1‑251 (MQ=255) cgCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGAGATAGTCTATAAGGGAAACGGTGATCATGGTCTTGTCCTGGCgggg > 2:318859/2‑250 (MQ=255) tACCTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGCTAGCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTAAAAAAAAtccacgcg > 2:83030/1‑244 (MQ=255) ccTTTCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCACGCCCCGGCAGCCCCCCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGAGATCGTCTATAAGGGCAACGGAGAGCATGGTCTTTTCCTGGCGGGGCAAAAAAATAcgaccttc > 1:340369/1‑245 (MQ=255) ccTTTCGCCAGCTGGCTTAGCAGCTCCAGATCGGTGATATCGGGCATGAAGATATCGCAAATACACACCTCCACACCGCGCCCCGGCAGCCCCGCCAGCGCCCCGCGCCCCGAACCAAACGCGGCAACTGCCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTAAAAAAAATACGCGCTTa < 1:259612/251‑1 (MQ=255) tCGGCAGCTGGCTTAGCAGCTCCAGATCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGTACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTAAAAAAAATACGCGCTTACCt < 1:166319/250‑1 (MQ=255) | CGTTCACGTTTGGTTAGCGGGTCCTGACGACCGGATGCCAGTTTAATGGCAATATCCGGCGTCAGATAACAGCCGCCCGTGGCAACCGTATGCACCGCAGCAATGAGTTCATCCGGGCTACAGCGTTTGGAAAGAAAGCCGCGTGCCCCCGCGTTAAGCGCCTGCTCAACCAGCGCAGGACTGTCGTGAACGGAGAGCATAATCGTCGCCATACCTTTCGGCAGCTGGCTTAGCAGCTCCAGACCGGAGATATCGGGCATGGAGATATCGCAAATACACACCTGCACACCGCGCCCCGGCAGCCCCGCCAGCGCCTCGCGCCCCGAACCAAACTCGGCAACTACCTGCAAATCAGGTTCCAGCCCCAGCAGCTGCGCAAAGCCGGAGCGGACGATGAGGTGATCGTCTATAAGGGCAACGGTGATCATGGTCTTGTCCTGGCGGGTAAAAAAAATACGCGCTTACCT > NC_000913/3850299‑3850765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |