| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,560,455 | +G | intergenic (+589/+167) | rtcR → / ← glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,560,455 | 1 | . | G | 98.3% | 191.2 / NA | 58 | intergenic (+589/+167) | rtcR/glpG | DNA‑binding transcriptional activator RtcR/rhomboid protease GlpG |
| Reads supporting (aligned to +/- strand): ref base . (0/0); major base G (25/32); minor base T (1/0); total (26/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
TTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGG‑TGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGC‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGAT > NC_000913/3560212‑3560690 | tttACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGG‑TGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGAt > 1:58170/1‑251 (MQ=255) ttACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGG‑TGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGcgaaggatc > 2:162002/1‑243 (MQ=255) cATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGG‑TGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGt > 1:344759/1‑251 (MQ=255) ttAGCAACGATGAGATTGTAGGTGAAAAAGAGCAAATTGCTTTGGTTAAGCAGTAAGTGTGCTAACGCTTCCGGCGTGG‑TGCGGGTCTCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGTTGGCATTGCGCTCGTGCAACGGCGTGTTAACCGAACTGGAGGGCAGCGCGGCACCGCCAT‑GATGGCGCAGGATAAGGATTTGCTctgc > 2:266971/1‑248 (MQ=255) gTTGAGATTGTTCGTGACAATGCGCAGATTGCTGTGATTGAGCAGAGCGTGCGCTCACGCTTCCGGCGTGG‑TGCCGAAATCGATAAAAAGCGTCGAGCCATTGGGGTTTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTCGGTGGCCTTGCGATCGTGCCACGGCGTGTTCACCGACCTGGAAGGCAGCGCCGCACAGCCAT‑GATGGCGCAGGCTCAGGGTTTGCTCCGcccacacct > 2:212864/1‑244 (MQ=255) ggTGAAAAGGCGAAAATTGCTGGGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGG‑TGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCgcgg < 1:103045/250‑1 (MQ=255) cAATGCGTAATTTGCTGTGTTGGAGCAGTGCGTGCGCTCCCGCTCCCGG‑GTGGGTGCCGATAGCGAAAAACAGCGTCGAGCCTTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCGGGGTGGCCTTGCGATCGTGCCCCGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATa < 1:158313/251‑1 (MQ=255) cAATGCGCAAATTGCTGTGATTGAGCAGTGCGTCCGCTACCGCTTCCGGCGTGG‑TGCCGATATCGATAACCGGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCTTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATa < 1:315454/251‑1 (MQ=255) gcgcAAATTGTTGTGATTGACCGGTGCGTGCGCTACCGCTCCGGGCGTGG‑TGCCGATATCGATAAACAGCGTCGAGTCTTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGCCCTTGCGATCGTGCCACGGGGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGGCGCGGCGAATAGTCt < 1:312280/251‑1 (MQ=255) aaTTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGG‑TGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTACGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCggg > 2:363922/1‑251 (MQ=255) ttGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGG‑TGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCt > 1:186153/1‑251 (MQ=255) gcggtgATTGAGAGGTGCGGGCGTTCCCGCTTCCGGCGTGG‑GGCCGATACCGATAAGCAGCGTCGAGCCATTGGGGATTGGCCCCGCCACTTTGCGGGCGATTCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGGGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGa < 1:20425/248‑1 (MQ=255) tgATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGG‑TGCCGATATCGATAACCAGCGTCGAGCCAATAGGGATTTGCACTGCCACTTTCCGGGCGCCGCCCTCCT‑TTTATTCGCTCTGGCTGGCCTTGCGACCGTGCAACGCCGTGTTAACCCAACTGGAAGGCAACGCCGCACC‑CCACCGATGGGGCAGGTTAAGAATTTGCTCCGACAGCTCATTTCGACCGCGGCGCATAGTCTGCgggatcgcggt > 1:196247/1‑243 (MQ=255) tgATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGG‑TGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACgg > 1:298755/1‑250 (MQ=255) aTTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGG‑TGCCGATATCGATAAACAGCGTCGAGCCATTGGGGCTTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTTAGGTCGCGGCGACTAGTCTGCGGGCTGACgg > 2:116466/1‑248 (MQ=255) tGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGG‑TGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCTCAGGATCAGGTTTTGCTCCGCCAGCCCATTGGGGGCGCGGCGGATAGTCTGCTGGCCGACGGAGaa > 2:15055/1‑250 (MQ=255) gtgcgtgcGCTACCGCTCCGGGCGTGG‑TGCCGATTTCGATAAACAGCGTCGCGCCTTTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGctct < 1:180498/251‑1 (MQ=255) gcgctcccctttCCGGCGGGG‑TCCAGATATCGATAACCAGTGCCGACCCTTGGGGGTTTTGCCCCGCCTCTTTGCGGGCTATGCGCTCTT‑TTTCTTCGGTCTGGTTGGCCTGGCAATCGTGCCACGGCGTGTAAACCGAACTGGAATGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGc < 2:359311/241‑1 (MQ=255) tCCGGCGTGG‑TGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACt > 1:314445/1‑251 (MQ=255) gg‑tgCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCGTGCGATCGGGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAAc < 1:55632/251‑1 (MQ=255) g‑tgCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAAcc > 1:140121/1‑251 (MQ=255) ccGATATCGATAAACCGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGTGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACActg > 2:8660/1‑251 (MQ=255) atCGATAAACGGCGCCGAGCCGTTGGGTATTTCCTCCGCCACTTTGCGGGCGATGCGCTTTT‑TTTCTTCTTTCTGGGTGGCCTTGCGATCGTGCCACGGCTTGTTAACCGAACTGGAAGGCGGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGtt < 1:305947/251‑1 (MQ=255) tCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTATGCGGGCTGACGGAGAAATGATCTACCAGCTCTTCGGTACTGACATAACCCTGCTGttt > 2:70164/1‑251 (MQ=255) aaccaccgcggggcgatggggtatgtGCTCCGCCACTTGGGGGGCGGTGCGCTCTT‑TTTCTGCGGTCGGGGTGGCCTTGCGATCGTGCCACGGCGTTTTAACCGACCTGGAAGGCAGCCCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCa < 2:31000/226‑1 (MQ=255) ggAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGCCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGataa < 1:54780/250‑1 (MQ=255) gCCATTGGGGATTTGCCCCGCCTCTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATAc < 1:89612/251‑1 (MQ=255) cATTGGGGATTTGCTCCGCCACTTTGCGGGCGCTGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCg > 1:353404/1‑251 (MQ=255) tGGGGATTTGCTCCGCCTCTTTGCGGGGGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTGGCGATCGTGCCACGGCGTTTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGtt < 1:77978/250‑1 (MQ=255) cACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGtgtttgtt < 1:96752/251‑1 (MQ=255) tgtGCGGGCGACGCGC‑CTTGTTTTTCCGGTCTGGGGGGCCTTGCGTTCGGGCCTCGGCGTGTTAACCGAACTGGAAGGCAGGCCCGCACCGCCAT‑GAGGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTGCGGGACTGACATAACCCTGCTGTTTAACCAGTGCGATAATACCGTTGTGACGTAGtgtttgttac < 2:417581/248‑3 (MQ=255) gtGCGGGCGATGCTCCCTT‑TTGCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCCCTTCGGTACTGACATAACCCGGCTGTTTAACCAGTTCGATAATACCTTTGTGACTTTTTGTTTGTTTc < 2:59172/248‑1 (MQ=255) gggggggatacgcTCTT‑TTTCTTCGGGCTGTGTGGCCTTGCGAGCGTGCCCCGGCGTGTAAACCGAACGGGAGGGCAGCCCCGCACCGCCAG‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCTGGCTGACGGAGAAATTCTCTACCAGCTCTTCGGTACTGACATATCCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGTCGTTGTGTTTGTTTCAttt < 2:416730/241‑1 (MQ=255) gCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCCCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCAttt < 1:239396/251‑1 (MQ=255) cGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCAttt > 1:129986/1‑250 (MQ=255) tGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACt > 2:322514/1‑181 (MQ=255) gcgcTCTT‑TTTCTTCGGGCGGGGTGGCCTTGCGATCGGGCCACGGCGTGTTAACCGAACTGGAAGGCAGAGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTGGTTTCATTTATAAATcc < 1:77214/250‑1 (MQ=255) cgcTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCt > 1:330377/1‑251 (MQ=255) t‑tttCTTCGGTTGGGGTGGCCTGGCGAGCGCGCCCCGGGGTGTTAACCGAACGGGAAGGCTGCGCCGCACCTCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTTCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAat < 2:286038/250‑1 (MQ=255) tttCTCCGGTCTGGGGGGCCTGGCGATCGGGCCGCGGCGTGTTAACCGAAGTGGAAGGCAGCGCCTCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACTGAGAAATGCTCTACCAGCTCTTCGGTACTGACATTACCCTTCTGTTTAACCAGTGCGATAATGCCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAatt < 1:262014/250‑1 (MQ=255) ttcttcGGTATGGGTGGCCTTGCGATCGTGCCACGGCGTGTTACCCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GCTGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGACTAGTCTGCGGGCTGACGGAGAAATGCTCTACAAGCTCTTCGGTACTGACATAAACCTGCTGTTTAACCAGTTCGATAATAACGTTGTGACGTTGTGTTTGTTTCATTTATAAATACCTGGAattat > 2:207696/1‑251 (MQ=255) ttcGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGACAAATGCTTTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGGCGTTGTGTTTGTTTCATTTATAATTCCCTGGAATTAtttt > 1:60418/1‑251 (MQ=255) cGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTAttttcg < 1:143311/251‑1 (MQ=255) cGGTCTGGGGGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTAttttc < 1:287953/250‑1 (MQ=255) ggggggccgtggcgagcgggCCAGGGCGTGTAAACCGAGCTGGAGGGCACCGCCGCTCCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGGTTGTTTCATTTATAAATCCCTGGAATTAttttcgtttt < 2:232907/231‑1 (MQ=255) ggggTGGCCTTGCGATCGTGCCACGGCGGGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTAttttcgttttc < 1:162002/250‑1 (MQ=255) ccTTGCGATCGTGCCACGGCGTGTTAACCTAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCAtt < 1:87616/251‑1 (MQ=255) ccTTGCGATCGTGCCACGGCGTGTTAACCGAAATGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATCCCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCAtt > 2:262015/1‑251 (MQ=255) aTCGGGCCACGGGGGGTTAACCGAACTGGAGGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGaa < 2:187978/251‑1 (MQ=255) ccGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACaaa < 2:129986/250‑1 (MQ=255) cggtgtgtTAACCGACCTGGAAGGCAGCCCCGCACCGCCAT‑GATGGCGCATGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACaaaa < 1:358818/247‑1 (MQ=255) gtTAACCGAACGGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCAGTTATAAAGCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCAt < 2:58170/250‑1 (MQ=255) gAACTGGAAGGCAGCGACGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTAGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAAc > 1:163994/1‑251 (MQ=255) aCTGGAAGGCAGCGCCGCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAAccc > 1:175796/1‑251 (MQ=255) ggAAGGCACCGCCCCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCa < 1:261999/249‑1 (MQ=255) ggCAGCGCCCCACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTa < 2:298755/251‑1 (MQ=255) gccgcACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGCATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCgg > 1:214655/1‑251 (MQ=255) cgcACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCg > 2:350304/1‑251 (MQ=255) cACCGCCAT‑GATGGCGCAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGAt > 2:276337/1‑251 (MQ=255) | TTTACCATCAACGTGTTAGCAACGTTGAGATTGTTGGTGACAATGCGCAAATTGCTGTGATTGAGCAGTGCGTGCGCTACCGCTTCCGGCGTGG‑TGCCGATATCGATAAACAGCGTCGAGCCATTGGGGATTTGCTCCGCCACTTTGCGGGCGATGCGCTCTT‑TTTCTTCGGTCTGGGTGGCCTTGCGATCGTGCCACGGCGTGTTAACCGAACTGGAAGGCAGCGCCGCACCGCCAT‑GATGGC‑CAGGATCAGGTTTTGCTCCGCCAGCTCATTGAGGTCGCGGCGAATAGTCTGCGGGCTGACGGAGAAATGCTCTACCAGCTCTTCGGTACTGACATAACCCTGCTGTTTAACCAGTTCGATAATACCGTTGTGACGTTGTGTTTGTTTCATTTATAAATCCCTGGAATTATTTTCGTTTTCGCGCATTGAGCGAATCAACAAAAGCCATCGCTAAACCCACGGCTAACCCGGCGAT > NC_000913/3560212‑3560690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |