| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,553,662 | A→C | Q193P (CAG→CCG) | malT → | DNA‑binding transcriptional activator MalT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,553,662 | 0 | A | C | 98.4% | 201.7 / NA | 64 | Q193P (CAG→CCG) | malT | DNA‑binding transcriptional activator MalT |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (37/26); minor base G (0/1); total (37/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
CAGCTTTTCATTGAGCTGGCGGAATGGCATAGCCCACTTTATCTGGTCATCGATGACTATCATCTGATCACTAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCAGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAA > NC_000913/3553415‑3553904 | cAGCTTTTCATTGAGCTGGCGGAATGGCATAGCCCACTTTATCTGGTCATCGATGACTATCATCTGATCACTAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGtt > 1:414904/1‑251 (MQ=255) aTTGAGCTGGCGGAATGGCATAGCCCACTTTATCTGGTCATCGATGACTATCATCTGATCACTAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTg > 1:425152/1‑251 (MQ=255) gAGCTGGCCGAATGGCATAGCCCACTTTATCTGGTCATCGATGCCTATCATCTGATCACTAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATAAACCAGAAAATCTCACCCTGGCGGTGTTGACACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACAGCTGGACATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGGTTTTTGATTGCCg > 2:441180/1‑251 (MQ=255) gCTGGCGGAATGGCATAGCCCACTTTATCTGGTCATCGATGACTATCATCTGATCACTAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTc < 2:152840/251‑1 (MQ=255) cGGAATGGCATAGCCCACTTTATCTGGTCATCGATGACTATCATCTGATCACTAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTc > 2:123794/1‑250 (MQ=255) aTCTGGTCATCGATGACTATCATCTGATCACTAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGa > 1:244700/1‑250 (MQ=255) tGGTCATCGATGACTATCATCTGATCACTAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGCAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGc > 1:79642/1‑251 (MQ=255) tcatcTGATCACTAATCCAGTGATCCCCGAGTCAATTCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTTGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGAt < 2:443062/250‑1 (MQ=255) atctgctcgctaaagcAGTGATACACGAGTCACTGCGCTTATTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACATTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCCACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGCAGCGAAGCCGGTTTTTGATTGCCGACTGTCATCGCCGATTGAAGCCGCAGCAAGCAGTCGGATTTGCGagg > 2:228746/16‑247 (MQ=255) gATCACTAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCATGGTGGTGATGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGATCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGttt > 1:501111/1‑251 (MQ=255) tAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGtt > 1:286398/1‑251 (MQ=255) aagccAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTg < 1:84685/248‑1 (MQ=255) aaTCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCCCCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGt < 2:153758/249‑1 (MQ=255) aaTCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTg > 1:418411/1‑251 (MQ=255) gATCCACGAGTCAATGCGCTGCTTTATTCGCCAACAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGGGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCAGCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGGCGGATTTGCGATGACGTTTCCGGTTGGGCGACg < 2:31580/250‑1 (MQ=255) ccACGAGTCAATTCGCTTCGTTATTCGCCATCAACCAGAAAATCGCACCCTGGTGGTGTGGTCACGCAACCTGCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTCATCAACTGCTGGAAATGGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATc < 2:361609/189‑1 (MQ=255) ccACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATc > 1:361609/1‑189 (MQ=255) gAGTCAGTGCGCTTCTTTATACGCCATCAACCAGAAAATCTCATCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAAATGGCATTTACCCATCAGGCAGCGATGACGTTATTTGATTGCCGTCTGTCATCGACGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACa < 2:49597/251‑1 (MQ=255) aGTCAATGCGCTTCTTTATTCGCCAGCAACCAGAAAATCTCACCCTGTTGGTGGTGTCACGCAACCTTCCGTAACTGGGCATTGCCAATCTGCGTGTTCGTTATCAACTGCTGCAAATTGGCAGTCAGCAACTGGTATTTACCCTTCAGGAAGCTAAGCGGTTTTTTTATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTTTGATTTGTGATGACGTTGCCGGTTGGGAGACGGCACTAc < 2:432188/249‑1 (MQ=255) gcTTCTTTATTCGCCAACAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGGCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGcc < 2:201349/251‑1 (MQ=255) ttCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCCACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATAGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGcc > 2:136940/1‑251 (MQ=255) aTCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGc > 2:56334/1‑249 (MQ=255) cAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGa > 2:157055/1‑250 (MQ=255) aaCCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCGCTCCGCCCGGCAGAAt < 1:374780/251‑1 (MQ=255) ccAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATAc < 2:28028/251‑1 (MQ=255) gAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGCAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTACTCGCCCTCTCCGCCCGGCAGAATAccc > 1:329154/1‑250 (MQ=255) tcACCCTGGTGGTGTTGTCACGCAACCTTCCGCACCTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGTTGa > 2:101400/1‑184 (MQ=255) tcACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGa < 1:101400/184‑1 (MQ=255) cACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGc < 1:365378/249‑1 (MQ=255) ggtggtGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCCGCCCATAAGt > 2:492613/1‑251 (MQ=255) gtggtgTTGTCACGCAACCATCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCCCTCAGcccctacgtc > 2:65609/1‑244 (MQ=255) tgttgtCACGCAACCTGCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTGTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTCCAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCTCTCAGCCCATAAg < 1:258690/245‑1 (MQ=255) tgttgcCACGCTACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGACGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAg > 2:258690/1‑245 (MQ=255) gttgtCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCAc > 1:66449/1‑251 (MQ=255) cGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTAACCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTAAAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCt > 1:487495/1‑251 (MQ=255) cGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATc < 1:262808/251‑1 (MQ=255) cAACTAGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAATCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTACGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGTACGCCGCCTGGCGGGAATCa > 2:246073/1‑250 (MQ=255) aaCTGGGCATTGCAAATCTGCGTGTTCGTGATAACCTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCTCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTGGGTCGACGGCACTCCAGCTAATCGCCCTCTCCGCCCGGCAGACTACCCGCTACGCCCATAAGTCGGCACGCCGCCTGGCGGGAATccat > 2:364497/1‑248 (MQ=255) gCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGCATCAATgccagc > 2:502899/1‑251 (MQ=255) attaccactcctcGTGTTCGTGCTCAAATGCTGGAAATTGTCAGTCAGCACCTGGCATTTACCCATCAGGAAGCGAAGCCGTGTCTTGACTGCCGTCTTTCATCGCCGTTTGAAGCCGCAGAAAGCATTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGAGGAATACCCACTCAGCCCATAAGTCGGCCCGCCGCCTGGCGGGAATCAATgccacccc > 2:331994/13‑247 (MQ=255) ttGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCAt > 1:56990/1‑251 (MQ=255) tCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCGTCAGGAAGCGAAGCCGTTTTTTGCTTGCCGTCTGGCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGAATTGCGAGGACGTTTCCGGTTAGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCAGCAGCATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGACTCAATGCCAGCCCTCTTTCgg > 1:246310/1‑251 (MQ=255) cGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCAGGCCGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGAttt > 2:152870/1‑250 (MQ=255) gtTCGAGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTCAAGCCGCAGAAAGCCGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGAACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCCTCTTTCGGATTATCt > 2:252395/1‑251 (MQ=255) gTGATCAACTGCTGGACATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGCAGCCGCAGAAAGCAGTCGGATTTGCGAGGACGTTTCCGGTTGGGCGACGGCTCTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGACGGCACGCCGCCTGGCGGGAATCAATGCCTGCCATCTTTCGGATTATCTGGTc < 2:273968/251‑1 (MQ=255) aTCAACTGCTGGAAATTGGCAGTCAGCAACTGGTATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCTGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGAt < 2:418411/251‑1 (MQ=255) aTCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGAt > 2:150600/1‑251 (MQ=255) aaCTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGCTTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATg > 1:8947/1‑249 (MQ=255) gctgGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGt < 2:108741/249‑1 (MQ=255) gtgGAAATTGTCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACTGCTAATCGCCCTCTCCGCCCGGCAGAATGCCCTCTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGtttt < 1:315723/250‑1 (MQ=255) gaaaagggggatCAGCAACCGGCATTGACCCCTCAGGAAGCGAAGCCGGTTTTTGATTGCCGTCTGGCATCGCGGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTGGGGCGGCGGCACTACAGCTAATCGCCCTCTCCGTCCTGCATAATACCCTCTCAGCCCATAAGTCTGCACGGTTCCTGGCGGGAATCAATGGCAGCCTTCTTTCGGATTATCTGGTCTATGAGGGTTTGGa < 2:301186/240‑1 (MQ=255) ccttccgagtttCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGAGTGACGGCTGGCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACGCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGa < 2:115574/240‑1 (MQ=255) ttGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCACTGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAAc > 1:427318/1‑251 (MQ=255) gcagaaaGCAACTGGCATTTACCCATCAAGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGCAGCCGCAGAAAGCAGTAGGATTTGCGATACCGTTTCCTGTTGAGCGACGGCACTACAGCTAATCGCGCTCTCCGCACGGAAGAATACCCACTCGGCCCGTACATCGGCACGCCGCCTGGCGGGAATCAGTGCCAGCAATCTTTCGGATTATCTGGTCGTTAAGGCTTTGAATAAAGTc > 2:134090/7‑251 (MQ=255) gTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGAt < 2:13072/251‑1 (MQ=255) tCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGa > 1:115574/1‑240 (MQ=255) cAACTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGTATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGc > 1:190009/1‑251 (MQ=255) aCTGGCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCa > 1:510968/1‑250 (MQ=255) gCATTTACCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAAcgcg < 1:28631/251‑1 (MQ=255) aCCCATCAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGTGCCAttt < 1:245410/251‑1 (MQ=255) aTCAGGAATCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTTGATGAGGTTTTGGATATCGTCGATCTCGCAACGCGCCATTTTCTg < 2:491061/251‑1 (MQ=255) cAGGAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGt < 1:123794/250‑1 (MQ=255) ggAAGCGAAGCCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTg > 1:279460/1‑250 (MQ=255) agcgaagcCGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGaaaa < 1:345179/251‑1 (MQ=255) | CAGCTTTTCATTGAGCTGGCGGAATGGCATAGCCCACTTTATCTGGTCATCGATGACTATCATCTGATCACTAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCAGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAA > NC_000913/3553415‑3553904 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |