| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,916,218 | IS5 (–) +4 bp | coding (1162‑1165/2757 nt) | barA → | sensor histidine kinase BarA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 58 (1.190) | 52/494 | 0.1 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2916221 | 0 (0.000) | coding (1165/2757 nt) | barA | sensor histidine kinase BarA | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 58 (1.190) | 50/494 | 0.1 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2916218 = | 0 (0.000) | coding (1162/2757 nt) | barA | sensor histidine kinase BarA | |||||
TTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTT > NC_000913/2288679‑2289151 | ttGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCg < 1:173710/250‑1 (MQ=255) aTTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGAATTATTACTTACACCAAATTCTTTTCTATGCTGTTATCCGCCAGGCTTGATTTTCGTATTATTGGCGGTTCCAT‑AAACCAACTGGATTTACTTTTTC‑ACGACAAACCCCTCAACTGTCTAACCATACTCCACAGTTTCTGCCATTACTATGGGTGGATATAAGGGAGGTGCGAATAAGCGGGGa > 1:512676/1‑250 (MQ=255) tGAGTATTATGCGGCGCCATTCATATCAATTGATTGATGCCCTCCGTTAATTTCAGTATTATTACTTACCCCAAATTCTTTTATATGCTGTTCTCCGCCAGGATGGATTTTCGTATTATTGGCGTTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACAAGATCAACGGTCTCACCATACGCAGCAGTTGATGCCAACGCTATGGGTGAATATAAGGAAGGTTCGAATAAGCGGGGAAATtcttct < 2:360440/250‑1 (MQ=255) gcggcgCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACt < 1:93031/249‑1 (MQ=255) ggcgCCCTTCATTTCAATGTACTGATACACTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTATCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCATCAAAACA‑CTGGATAT‑CTTTTTTCAGGACAACACACTCAAATATCTCAACATAATCAAAAGTTGATGCCAATGCTATGGGGGAATATAAGGAAGGGGCGAAAAAACGGGGGAATGCTTCTCGGCTgcttaagg > 1:311941/1‑244 (MQ=255) cgcCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCCGGACAAAACCCTCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGGATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCCGtc > 1:42345/1‑250 (MQ=255) aTGTACTGATACACTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCACAT‑AAACCAGCTGGATAT‑TTTTTTCCAGGAAAAAACCATCAACTGTCTTACCCTACTCCACTGTTGCAGCCCATGCTATGGGGGAATATAAGGAAGGGGCCAAAAAGCGGGGGAATTTTTCTTGGCTGACTCAGGtatttcattttctca > 2:369117/1‑245 (MQ=255) ccGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGGTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACTCCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAAGTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttt < 2:307818/250‑1 (MQ=255) tCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCCT‑AAACCCGCTGGGTAT‑CTTTTTCCAGGACCACCCCATCCCCTGTCGCCCCATACTCAACAGTTGTTGGCACTGCTTTTGGTGAATATCAGGGAGGTGCGAATAAAAGGGGAGATTCTTATCGGCGGAATCTGTCATTTCAGTTTTTCCTGTTTTTGCCGCTTTTTTCTCCCGt > 2:163745/1‑251 (MQ=255) tCAGTATTATTAATTACACCAAATTCTTTTATATGCGGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATGTTTTCTcc < 1:163745/248‑1 (MQ=255) acacCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGTGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGCAAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCa < 1:267945/251‑1 (MQ=255) acacCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCATATTATTGGCGGCCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGGCAACACCATCAAGTGGCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTGCTTCATGTGGGAGCCGATTTTGTCTCCCGTAAATGCCGTGAATc < 2:189893/250‑1 (MQ=37) acacCAAATTCTTGTGTAGGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATCAGCGGGGAAATTCTTCTCGGCTGACTCAGGCATTTCATTTCGTCATGTTTGATGCGATTTTTTCTCCCGTAAATGTCGTGAATCa < 2:164228/251‑1 (MQ=38) ttttATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGGAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTTAGCCGATTTTTTCTCCCCTAAATGCCTTGAATCAGCCTAttt > 1:212974/1‑248 (MQ=255) tttATATGCTGTTCTCCGCCATGATTGATTTTCGTATTATTGGCGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAg < 1:325378/249‑1 (MQ=255) gTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttctt < 1:43307/249‑1 (MQ=255) cGCCAGGATTGATTTTCGTATTATTGGCGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAttt < 1:63231/251‑1 (MQ=255) ccAGGATTGATTTTCGTATTATTGGCGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTaa < 2:269002/251‑1 (MQ=255) attgattTTCGTATTATTGGCGGTCCCAT‑AAACCCGCTCGATAT‑CTTTTTCCAGGACAACACCCTCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATGTAACGAAGGTGCGAATAAACGGGGGAAATCTTCTCAGCTGACTCAGTCATTTCATGTCTTCATGTTTGAGCCGCTTTTTTCTACCGTAAATGCCTTTAATCAGCCTTTTTAGACCGTTTCTTCGCCATTTAAGGCGt > 1:55228/1‑251 (MQ=255) attGGCGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGttttt < 1:242794/250‑1 (MQ=255) ggTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATaaggaa > 1:121792/1‑100 (MQ=255) ggTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATaaggaa < 2:121792/100‑1 (MQ=255) t‑AAACCAGCTGGATAT‑ATTTTTCCAGGACAACCCCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAATTGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTcc > 1:419570/1‑251 (MQ=255) ccAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACt > 1:63036/1‑251 (MQ=255) atat‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATc > 2:502651/1‑251 (MQ=255) ttttCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGt < 1:409219/242‑1 (MQ=255) ttttCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGt > 2:409219/1‑242 (MQ=255) tttCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCTAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCAGTTTTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTgg < 1:473957/250‑1 (MQ=255) tCCAGGACAACACCATCATTTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATTAGCGTGGTAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTTTTTAGACCGTTTCTTCGCCATTTAATGCTTTATCCCCAGTTTTTAGTGATATCTCTCCCACTGACGTATCATTTGGTc < 2:377935/250‑1 (MQ=17) cAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGc > 1:353588/1‑251 (MQ=255) cTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGcc > 1:270169/1‑250 (MQ=255) aCAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGcc < 1:466880/251‑1 (MQ=255) aGTTGATGCCAATGCTATGGGTTAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGGTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTATTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAg < 1:294000/251‑1 (MQ=255) tGCTATGGGTGAGTATAAGGAAGGTGCGACTAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGtt > 1:364317/1‑251 (MQ=21) | TTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGATTGATTTTCGTATTATTGGCGGTCCCAT‑AAACCAGCTGGATAT‑CTTTTTCCAGGACAACACCATCAACTGTCTCACCATACTCAACAGTTGATGCCAATGCTATGGGTGAATATAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTT > NC_000913/2288679‑2289151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |