Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	2,175,525	IS1 (+) +8 bp	coding (790‑797/1263 nt)	gatZ ←	putative tagatose‑1,6‑bisphosphate aldolase 2 chaperone

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1978503 =	NA (NA)	54 (1.110)	50/494	0.1	100%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	2175525 =	0 (0.000)					coding (797/1263 nt)	gatZ	putative tagatose‑1,6‑bisphosphate aldolase 2 chaperone
*	?	NC_000913	= 2175532	0 (0.000)	43 (0.890)	39/488	0.3	100%	coding (790/1263 nt)	gatZ	putative tagatose‑1,6‑bisphosphate aldolase 2 chaperone
	?	NC_000913	3583428 =	NA (NA)					noncoding (1/768 nt)	IS1	repeat region

GGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGA  >  NC_000913/1978502‑1978751  |                                                                                                                                                                                                                                                         gggTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGTCTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACGTTCGGCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGGTTGCTGATTACGTGCAGCTGTCCCTTCAGGCGGTATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGa  <  1:238227/250‑1 (MQ=11)  |                                                                                                                                                                                                                                                         GGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGA  >  NC_000913/1978502‑1978751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.