| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,889,448 | 0 | T | G | 28.3% | 97.6 / 12.9 | 60 | T218P (ACC→CCC) | cysI | sulfite reductase, hemoprotein subunit |
| Reads supporting (aligned to +/- strand): ref base T (14/29); new base G (15/2); total (29/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.22e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCACTCGTACGCT‑TCCGCGTGCAGCTGCGACTCGTAAGGGTTCGAGGTGCAGAGTACGTTACGGTTCATGTCGTTAGCTGTCGCCAGCGCATCAAGACCGACCGAGTGCAGC > NC_000913/2889200‑2889692 | ggttcggttACCCCAGTAACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGGTCACTACC‑GGGGt‑tt > 1:156798/1‑251 (MQ=255)ggttcggtgGCCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTGCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGt‑tt < 1:181437/251‑1 (MQ=255) gttcggttACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGt‑ttt > 1:119650/1‑251 (MQ=255) gttcggttACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGt‑ttt < 1:87599/251‑1 (MQ=255) tACCCCAGTCTCGCTGAGTTGTCACGACGGTTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAAttt < 1:287463/250‑1 (MQ=255) ccccAGTCACGCTGAGTTGTCACGACGGCTGCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTAcg < 2:143555/251‑1 (MQ=255) ccAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTAcgcg < 1:392923/251‑1 (MQ=255) cACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCagg < 1:316108/251‑1 (MQ=255) cTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGGTCACCACC‑GTGGG‑TTTGAATTTTCGCGGCagggagg > 1:162133/1‑251 (MQ=255) gTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGTATTTACGCGGCAGGTAGGTCTGGcc > 1:151277/1‑251 (MQ=255) tccctgtggttgcGGCCTCCGCCAGCGTATTCTCCTGCGGCATATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCCCCTCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCACGTAGGTCTGGcc < 2:147619/238‑1 (MQ=255) ttCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGGTCACTACC‑GGGGGGTTTGG‑TTTACGCGGCaggggggggttgccgcgggtcgggt > 2:76610/1‑229 (MQ=255) ggCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGGTCCCTACC‑CGGGG‑TTTGGATTTACGCGGGaggtgggggggggcgagggtcgggtctt > 2:238224/1‑227 (MQ=255) gCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCCGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGCTCACTACC‑CTGGG‑TTTGAATTTACGCGGCGGGGGGGTCTGGCCGAGGATCGGgtcttt > 1:311790/1‑250 (MQ=255) gCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGGTAACTACC‑GTGGG‑TTTTAATTTTCGCGGCagggagggtgggccgggggtcgggtcttt > 1:371993/1‑229 (MQ=255) ccGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTtcatca < 1:74150/251‑1 (MQ=255) gCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTTATCagt > 1:249077/1‑251 (MQ=255) gTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGGTCACTACC‑GTGGG‑TTTGAATTTACGCGGGAGGTAGGGCTGGCCGAGGATCGGGTCTTTCTCagtaggggg > 1:141244/1‑247 (MQ=255) gCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACt < 1:561/251‑1 (MQ=255) cccAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGG‑TGTGAATTTACGCGGGAGGTAGGTCTGGCCGAGGATCGGTTCTGCATCAGGAGTGGCG‑ACttt < 2:24232/250‑1 (MQ=255) cAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACttttt < 1:459809/251‑1 (MQ=255) cAGCGGCAGATAGCCAAACTCACTCGCGGGGCGGGCGGAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATAGCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACttttt < 2:406994/251‑1 (MQ=255) ccAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGGTCACTACC‑GGGGT‑TTTTAATTTACGCGGCCGGTAGGGCTTGCCGGGGGTCGGTTCTTTCTCAGTAGTGGGG‑ACttttttcttgttgcgcc > 1:48466/1‑238 (MQ=255) cactcGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTGGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GAtct < 2:149181/249‑1 (MQ=255) gcgGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GGGGT‑TTTGAATTTACGGGGCAGGTGGGTCTGGCCGGGGGACTGGTCTTCGTCACTACTGGCG‑ACGTTTTTCTGGTCGAGCCA‑GATCTccacct > 2:79982/1‑246 (MQ=255) ggTGCGGGCGTCGGTTTTCTTGTTGCCGTGTTCGCTGGAAAGCCAACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCAATCCCCGGGGT‑TTT‑AATTTTCGCCGCCGGCCGGTCTGGCCGAGGGTCGGTTATTCCTCCACAGTGGCG‑GTTTTTTCCTgggcgggcccgattctcccctcc > 2:313304/1‑229 (MQ=255) gTGCGGGCGTAGGTTTTCTTGGTGCCGTGTTCGATGGAAAGCCCAACGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GGGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑CCTTTTTCCTGGTCGAGCCA‑GATCTCCGCATAcgc < 1:146700/251‑1 (MQ=255) gCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATAcgcgc < 2:371993/251‑1 (MQ=255) gCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGt < 2:180690/251‑1 (MQ=255) cGTGTACGATTGAAAGCCCCCCGCCCTCCAACAGGGTAAAGCCCACCAGCTTGCCGTTTTCTGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTGCCTGGTCGATCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAAAAGATGCt < 2:325724/249‑1 (MQ=255) gtgtTCGATGGGAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCCATACC‑GCGGT‑TTTTAATTTACGCGGCCGGTAGGGCTGGCCGAGGATCGGGTCTTCCTCAGTAGTGGCG‑ACTTTTTTCTGGGCGGGCCA‑GATCTCCCCATACGCCCGGGtgccaggccacacatgtcccg > 2:174537/1‑231 (MQ=255) tCGATGGAAAGCCCTCCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCTATCGCCACGAAGTTCATGTCGGTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTTGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGaaa < 1:502349/250‑1 (MQ=255) cGATGGAAAGCCCACCGCCCACCAAAAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGG‑TTTTAATTTACGCGGGCGGTAGGTCTGGCCGAGGGGCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTTCTGGGCGAGCCA‑GATCTCCGCATACGCGCGGGGACGCGG‑CCACAGATGCTCAGAAAtc > 2:487268/1‑251 (MQ=255) gATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAAtct < 2:151277/251‑1 (MQ=255) ggAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAAtcttc < 1:244039/250‑1 (MQ=255) gAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTTCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATcttctt < 1:339207/251‑1 (MQ=255) aaGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGG‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCg < 1:161197/251‑1 (MQ=255) gcccaccgcccaccAACAGGTTCAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGG‑TTTGCAATTACGCGGCAAGGAGGGCTTGGCGAGGGTAGGGTCTTCATCAGTAGTGGCG‑ACCTTTTCCTTGGCGGGCCA‑GATCTCCGCCTACGCGCGGGGACGAAG‑CGAAAGATGGCCAGAAAACTTCTTTGcc > 1:396845/1‑251 (MQ=255) cgccgcccaccAACAGGTTAAAGCCCTCCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGGGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGTCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCAc < 1:101281/249‑1 (MQ=255) cccaccAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGGTCACTACC‑GTGGG‑TTTTAATTTACGCGGCAGGTAGGTCTGGCCGGGGATCGGGTCTTTCTCAGTAGGGGGGGATTTTTTCC‑GGGCGAGCCAAGA‑CTCCCCCTAAGCGCGGGGACGAGG‑CACAAGATGCCCAGAAATCTTCTTCTCCCCCTCGt > 2:365137/1‑250 (MQ=255) aaCAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGGTCACCAAC‑GGGGG‑TTTGGATTTTCGCGGCACGTAGGTCTGGCCGGGGCTCGGTTTTTTATCCGTAGTGGCG‑CCTTTTTCCCTTTCTCGCCC‑GATTTCCCCCTACCGGCGGGGACCAGG‑CAACAGAGGCGCATAAATCTTTTTCCCCCCCCCGTACGCT‑Tc > 2:457275/1‑251 (MQ=255) aGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTGGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTTCTGGTCGAGCCA‑GATCTCCCCATACGCGCGGGGACGAGG‑CAACAGATGCTCCGAAATCTTCTTCCCCCCCTCGTACGCT‑CCcgc > 1:114953/1‑251 (MQ=255) caccaGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCACTCGTCCGCT‑TCCGCGTGCAGCTGca < 2:114953/251‑2 (MQ=255) aGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCACTCGTACGCT‑TCCGCGTGCAGCTGCGACTc < 1:76610/251‑1 (MQ=255) gCGATCGCCACGAAGTTCATGTCGTGGGCGTGCAGATCGATATCGTGCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCATGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCACTCGTACGCT‑TCCGCGTGCAGCGGCGACTCGTAAGGGTTCGAGGt < 2:341005/251‑1 (MQ=255) aTCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGGTCACTACC‑GGGGG‑TTTGAATTTTCGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCCTCAGTAGTGGCG‑CCTTTTTCCTGGTCGAGCCA‑GATTTCCGCATACGCGCGGGTACGGGG‑GAACCAATGCTCAGAAATCTTCTTCGCCCACTCGTACGCT‑TCCGCGTGCAGCTGCGGCTCGTACGGGTTCGAggggc > 1:238925/1‑247 (MQ=255) gCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATGACTACC‑GTGGG‑TTTGGATTTACGGGGGCGGTGGGTGTGGACGCGGATCGGTTCTTTATTCGGAGAGGCG‑ACTTTTTCCTGGACGAGCCA‑GATCTCCGCGTACGCACGGGTACGAGGGCAA‑AAATGCACAGAAATCTTCTTTGCCCCATCGTGAGAT‑TCCGCGGGCAGCCGCGCATCGTCAGGGGTGGAGGTGCag > 1:84906/1‑249 (MQ=255) aaGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GGGGT‑TTTGAATTTACGCGGCAGGGAGGTCTGGCCGAGGAGCGGTTCTTCCTCAGTAGTGGCG‑GCTTTTTTCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAAACGATGCTCAGAAATCTTCTTCGCCCACTCGTACGCT‑TCCGCGTGCAGCTGCGAATCGTAAGGGGTCgggggggcgagtacggt > 1:484083/1‑235 (MQ=255) aGTTCATGTCGTTGGCGTGCAGATCGATTTCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCACTCGTACGCT‑GCCGCGTGCAGCTGCGACTCGTAAGGGTTCGAGGTGCAGAGTACGTTa < 2:81902/251‑1 (MQ=255) aTGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTTCC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCACTCGTACGCT‑TCCGCGTGCAGCTGCGACTCGTAAGGGTTCGAGGTGCAGAGTACGTTACGGtt < 1:194916/251‑1 (MQ=255) aTGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCGTCATCAGTAGTGGCG‑ACTTTTGCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCACTCGTACGCT‑TCCGCGTGCAGCTGCGACTCGTAAGGGTTCGAGGTGCAGAGTACGTTACGGtt < 1:492882/251‑1 (MQ=255) gTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGG‑TTTGAATTTACGCGGCAGGTAGGGCTCGCCGAGGATCGGGTCTTCATCAGTAGAGGCG‑ACTTTTTCCTGGTCGAGCCA‑AATCTCCGCCTACGCGAGGGTACGCGG‑CAACAAATGGTCAGAAATCTTCTTCGCCCCATCGTACGCTCTCC‑CGTGCAGCTGCGCCACGTAAGGGTGCGAGGTGCAGAGTACGGTACGGTTcc > 1:236730/1‑250 (MQ=255) ttGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTAAGCGGGAGGAGGGTCTGGCCGAGGATCGGGTTTTTATCAGTAGTGGCG‑CCTTTTTCCTGGTCGAGCCA‑AATCTCCGCTAAAGCGCGGGGACGAGG‑CAACAGATTCTCAGAAAACTTCTTTGCCCACTTGTCCGCT‑TCCGCGAGCATCTGCGACTTGTAAGGGGTCTAGGGGCAAAGTATGTTatgggtcctgtg > 1:13435/1‑240 (MQ=255) ggCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCACTCGTACGCT‑TCCGCGTGCAGCTGCGACTCGTAAGGGTTCGAGGTGCAGAGTACGTTACGGTTCATGTCGTTAGc < 1:244423/250‑1 (MQ=255) gCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGG‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGGAGTGGGG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGGACGAGG‑GAACAGATGCTCCGAAAACTTCTTCGCCCACTCGTACGCT‑TCCGCGTGCAGCTGCGACTCGTAAGGGTTCGAGGTGCAGAGTACGTTACGGTTCATGTCGTTAGCt > 1:394291/1‑251 (MQ=255) aGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGG‑TTTGAAATTACGCGGCAGGGAGGGCTGGCCGGGGATCGGTTCTTCATCAGTAGGGGCG‑ACTTTTTTCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGGACGGGG‑CAACAGATGCTCAGAAATCTTTTTCGCCCCCTCCTACGCT‑TCCGCGTGCAGCTGCGGCTCGTAAGGGGTTGGGGGGCCGAGTACGTTACGGTTCATGTCGTTAGCTGt > 1:340004/1‑251 (MQ=255) tcgttatCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGACGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GAGCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAAGCTTCTTCGCCCGCGCGTACGCT‑TCCGCGTGCAGCTGCGACTCGTAAGGGTTCGAGATGCAGAGTACGTTACGGTCTATGTCGTCAGCTGttg < 2:224920/246‑3 (MQ=255) ggCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCATGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCACTCGTACGCG‑TCCGCGTGCAGCTGCGACTCGTAAGGGTTCGAGGTGCAGAGTACGTTACGGTTCATGTCGTTAGCTGTCGCCAGCGCATCAAgac < 2:340004/250‑1 (MQ=255) gggATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAAtc > 2:145550/1‑141 (MQ=255) aTCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑AATTTTTCATGGTCGAGCCA‑GATCTCCGCATACGCGCGGGAACAAGG‑CAAAAACTGCTCAGAAATCTTCTTCGCCAACTCGTACGCT‑TCCGCGTGCGGCTGCGCCTCGTAAGGGTTCGAGTAGCAGAATAGGTTACGGTTCATGTCGTTAGCTGTCGCCAGCGCATCAAGaccgaccg > 1:502646/1‑250 (MQ=255) tCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCACTCGTACGCT‑TCCGCGTGCAGCTGCGACTCGTAAGGGTTCGAGGTGCAGAGTACGTTACGGTTCATGTCGTTAGCTGTCGCCAGCGCATCAAGaccgaccg > 1:389824/1‑249 (MQ=255) aCTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCACTCGTACGCT‑TCCGCGTGCAGCTGCGACTCGTAAGGGTTCGAGGTGCAGAGTACGTTACGGTTCATGTCGTTAGCTGTCGCCAGCGCATCAAGACCGACCGAGTg < 2:156798/251‑1 (MQ=255) tACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCACTCGTACGCT‑TCCGCGTGCAGCTGCGACTCGTAAGGGTTCGAGGTGCAGAGTACGTTACGGTTCATGTCGTTAGCTGTCGCCAGCGCATCAAGACCGACCGAGTgc > 2:186910/1‑250 (MQ=255) c‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCACTCGTACGCT‑TCCGCGTGCAGCTGCGACTCGTAAGGGTTCGAGGTGCAGAGTACGTTACGGTTCATGTCGTTAGCTGTCGCCAGCGCATCAAGACCGACCGAGGgcagc > 2:105693/1‑250 (MQ=255) | GGTTCGGTTACCCCAGTCACGCTGAGTTGTCACGACGGCTTCGGCCACCGCCAGCGTATGCTCCAGCGGCAGATAGCCAAACTCACTCGCGGTGCGGGCGTAGGTTTTCTTGTTGCCGTGTTCGATGGAAAGCCCACCGCCCACCAACAGGTTAAAGCCCACCAGCTTGCCGTTTTCGGCGATCGCCACGAAGTTCATGTCGTTGGCGTGCAGATCGATATCGTTCTGTGGCGGGATCACTACC‑GTGGT‑TTTGAATTTACGCGGCAGGTAGGTCTGGCCGAGGATCGGTTCTTCATCAGTAGTGGCG‑ACTTTTTCCTGGTCGAGCCA‑GATCTCCGCATACGCGCGGGTACGAGG‑CAACAGATGCTCAGAAATCTTCTTCGCCCACTCGTACGCT‑TCCGCGTGCAGCTGCGACTCGTAAGGGTTCGAGGTGCAGAGTACGTTACGGTTCATGTCGTTAGCTGTCGCCAGCGCATCAAGACCGACCGAGTGCAGC > NC_000913/2889200‑2889692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |