| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 811,721 | 0 | T | G | 35.1% | 88.5 / 11.1 | 74 | V67G (GTG→GGG) | bioC | malonyl‑acyl carrier protein methyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (8/40); new base G (24/2); total (32/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.39e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCGCATGAAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCA > NC_000913/811479‑811949 | gcgcATGAAAGGCAGGATATCGACCGTCTGCTGGAGTTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCt < 2:401105/251‑1 (MQ=255) aTGAAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGGGACGGCCtt > 1:3190/1‑248 (MQ=255) aTGAAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCGGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGa < 1:326496/251‑1 (MQ=255) gcgggattgcGACCGTCTGTTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTTTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGAtctctc < 2:229119/241‑1 (MQ=255) gCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTcg < 1:161306/251‑1 (MQ=255) gCAGGATACCGACCGTTAGTTGGATGTGCGTCATGGCAACGGGTAATAACAAAGCCATTGCAGCGGCATTTGGTCGTGCAGCCGCACACTAGGATAAACAGGCAGAGCTACAGCG‑CCAGAGGGCTGCCGCCTTACGTGCAATG‑CTTCCACAGCGT‑AAATACCCCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGTAACG‑TCACGCGCAGGTGACGTCCTTAGATCTCTcg < 2:310876/251‑1 (MQ=255) gATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGGACG‑GCCCGCGCCGGGGACGGACTTAGATCTCTcgccgc > 2:104428/1‑251 (MQ=255) atatCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGCACG‑TCCCGCGCCGGGGACGGCCTTAGATCTCTCgccgcc > 1:451895/1‑251 (MQ=255) atcgacggtctgtgtgAGGGGCTGCATGGAAACGGTAAATAAACAAGCCATTGCAGCGGCATTTGGGCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGCCGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCa < 1:289828/235‑1 (MQ=255) gACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGGACG‑GCACGGGGAGGGGACGGCCTTTGATCTCTCcccgcccaagc > 2:305013/1‑246 (MQ=255) tCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCCATGCCTGtt > 1:359593/1‑251 (MQ=255) ctgctgGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCCGGGGGCGGCCTTAGATCTCTCGCCGCCAAAGCTTGTTc > 2:425050/1‑251 (MQ=255) gctgGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATGCACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGATCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCa < 1:314724/250‑1 (MQ=255) ggAGGTGCTGCATGGCACCGGTTAATAAACAAGCCATGGCAGCGGCAGTTGGTCGGGCAGCCGCACACGATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCGCGCCGCCAATGCTTGTTCAgg < 1:167189/249‑1 (MQ=255) gAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACCCCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCAc < 1:180590/251‑1 (MQ=255) gAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGGCC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCAc < 1:95650/251‑1 (MQ=255) gAGGGGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCAc < 1:352276/251‑1 (MQ=255) gggTGCTGCATGGCAACTGTTAAAAAACAAGCCATTGCATCGTCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGCCGCCTTACTGGCAATG‑CTTCCTCAGCTT‑AAATACACCCACGTACTGGACGCG‑GGTGGTGGACT‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCATGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACg < 1:408849/250‑1 (MQ=255) ggggcggcATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGGGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACCCCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGc < 2:36823/245‑1 (MQ=255) tgctgcATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACGGTC‑CGGGCCGGGGACGGGCTTATATATCTCGCCGCCAATGCTTGTTCAGGCACGccc > 1:336184/1‑250 (MQ=255) gatggcactgttaaataaACAAGCCATTGCAGCGGCATTTGGCCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCGGACGCCTTACGGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAgg < 2:409410/238‑1 (MQ=255) aTGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑GCACGCGCAGGGGACGGCCTTAGGTCTCTCGCCGCCAATGCTTGTTTCGGCACGCCAGAAgg > 1:411395/1‑250 (MQ=255) gcaccggtaaataacaaaGCCCTTGCAGCGGCAGTTGGTGGGGCAGCCGCACACTAGGACCAACAGGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTCCCCCAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGc < 2:94477/235‑1 (MQ=255) gTTAATAACCACGCCATTGCAGCGGCAGTTGGTCGGGCAGCCGCCCACTATGAGCAACAGGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGa < 2:119218/251‑1 (MQ=255) ttAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑GCAAGCGCCGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCCGCAGGATGGCGCAGAc > 1:308098/1‑251 (MQ=255) ataaACAAGACATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑GCACGCGCAGGGGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTTAGGCACGCCCGCAGGATGCCGccaacca > 1:100864/1‑244 (MQ=255) aaaGCCATTGCGGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGCCGCCTTACGGGCAATG‑CTTCCACAGCGT‑AAATACACCCCCGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCt < 2:251905/250‑1 (MQ=255) aGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCCCGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAAAGCTTGGTCAGGCACGCCAGAAGGATGCCGCCGACCATTATCTgg > 1:379219/1‑251 (MQ=255) gCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCCGGGGACGGCCTTAGATCTCTCGCCGCCCATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGc > 1:119049/1‑251 (MQ=255) cATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTCCTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGCGGCG‑GGTTGTGGCCC‑TGTCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGAGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCgg < 1:196804/251‑1 (MQ=255) aTTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCTTTACGGGCAATG‑CTTCCACAGCGT‑AAATACCCCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCggg < 1:413222/251‑1 (MQ=255) aTTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCAAGCGCAGGGGACGGCCTTAGATCTCTCGCCGCCAATGATTGTTCAGGCACACCCGAAGGGAGCCGCAGACCAATATTCGGCggg > 2:32989/1‑251 (MQ=255) gcatcggtaTTTGGCCGGGCAGCCGCTCACTATGAGCAACATGCAGATCTACAGTG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGC‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑GGGCGGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGgaga < 1:500809/243‑1 (MQ=255) gCGGGATTTGGTCGGGCAGCCTCACACTATGAGCAACATGCAGATCTACAGCG‑CCATAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCGCGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGGCGGTCTTAGATCTCTCGCCGCCAATGCTTTTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGatat < 1:331285/251‑1 (MQ=255) ccGGCGTTTGGTCGGGCTGCCCCACCCGACGAGAAAAATGCAGATCTCCGGCG‑CGGGAGGTCTGCCGCCTTACTGGCAATG‑CGTCCACAG‑GTGAAAGGCACCCACGTGGTGGGGGCG‑TTTTGGGGCCC‑TGGCTGGAGGTGCCGCCACGGGCGGGGACG‑TAACGCGCAGGTGACGGACTTAGTACTGTCGCTTCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGTCCAGTTTCTTGTGGGAGatat < 2:293906/250‑1 (MQ=255) gCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCCCGCGCAGGGGACGGCCTTAGATCCTTCGCCGCCCATGCTTGTTCCGGCCCGCCAGAAGGATGCCGCCGACCATTATCTGGCggggggtattg > 1:403565/1‑242 (MQ=255) gTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGAGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCCCGCGCAGGGGACGGCCTTAGATCTCTCGCCGCCCATGCTTGTTCAGGCCCGCCCAACGGATGCCCCAGACCATTATAGGGCGGGGGAAAT‑CGAATCCCTg > 1:267683/1‑251 (MQ=255) ccGGGCAGCCGCCCATTAGGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCGTACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACCCCCACGTACTGGACGCG‑GGTTGGGGACC‑GGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTGAGATCTCGCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGc < 2:451895/250‑1 (MQ=255) gggCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCCCGCGCCGGGGACGGCCTTAGATCTCTCGCCGCCCATGCTTGTTCAGGCACGCCCCAAGGATGCCGCCGACCATTATCTGGCGGGGGATAT‑CGAATCCccgccg > 1:309018/1‑251 (MQ=255) gCAGCCGCCCACTAGGAGCAACATGCAGATCAAC‑GCGGCCGGGGTCCGGACGCTTTCCTGG‑AATGGCTTCACCAGCGA‑AAATACCCCCACGTACTGGGCGCGTGGTTG‑GGCCC‑GGGTTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGGGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGAGGCCGCAGCCCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGtt < 2:195267/251‑1 (MQ=255) cGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGGACG‑TCACGCGCAGGGGACGGCCCTAGATCTCCCGCCGCCCATGCTTGTTCAGGGACGCCCGCAGGATGGCGCAGACCCTTATCTGGCggggggtatcaactcccctccgttggcg > 2:50331/1‑225 (MQ=255) cacccgaagAGCAACATGCAGACCTACAGCG‑CCAGATGGCTGCCGCCTTACTGGCAATG‑CTTCCCCAGCGA‑AAATACCCCCCCGTACTGGACGCG‑GGTTGTGGCCC‑GGGCTGGATGGGCCGCCACTGGCGGGAACG‑TCACTCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACt < 1:270200/243‑1 (MQ=255) cacaCTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGGACG‑TCACGCGCCGGGGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGGTGCCGCCGACCATTATCTGGCGGGAGATAA‑CGAATCCCTGcccgttgcgccc > 2:123878/1‑241 (MQ=255) cacTATGAGCAAAATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATCCCCCCCCGTCCTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGc < 1:415641/251‑1 (MQ=255) acTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCCATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGGACG‑TCACGCGCAGGTGACCGCCCTAGGTCTCTCGCCGCCAATGCTTGTTTAGGCACGCCAGAAGGATGCCGCCGACCATTATCTGGCGGGAGAAAT‑CGAATCCCTGCCGGTAGCGACTGCg > 1:147095/1‑251 (MQ=255) cTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAAAG‑TCACGCGCAGGGGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACCCCCGAAGAGTGCCGCAGACCAATATCTGGCGGGAGGTAT‑CGCATCCCTGCCGGTAGCGGCTGCgg > 1:85950/1‑250 (MQ=255) gtaagcaacttgaaaatttacggcg‑cCTGAGTGCTTCCGCGTAACTGGCATTG‑CTTCCAAAGGGA‑AAAAACCCCCACGTACGGAAGGGG‑GGTTGGGGCCT‑TGGTTGGATGGGCCGCCTCGTGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCCCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGAGGCCGCAGACCATTACCGGGCGGGAAATAG‑CGAACCCCTGCCGTTAGCGCCTGCGACg < 2:1739/229‑1 (MQ=255) aTGAGCAACATGCAGATCTACACCG‑CCAGAGTGCTGACGCATTACTGGCAATG‑CTGCCACAGCGT‑AAATCCACCCACGTACTGGACGCG‑GGTTGGGGACC‑TGGCTGGATGGGCCGCCACTGGCGGGAACG‑TCACGCGCAGTTGACGGCCTTAGACCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACg < 1:133610/251‑1 (MQ=255) aCATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCCCCCCAGAAGGATGCCGCAGACCCTTATCTGGCGGGGGATAT‑TGACTCCCTGCCGTTAGCGACTGCGCCGTT‑CGATc > 1:310804/1‑251 (MQ=255) cAGATCTACAGCG‑CAAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACCCCCACGTACGGGACGCG‑GTTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCa < 1:414749/251‑1 (MQ=255) gcgctccggcg‑cCAGTGTGCTGACGCCTTACTGGGAATG‑CTCCCACGGCTT‑AAATCCCCCCACGTCCTGGACGCG‑GGTGGTGGACC‑GGGCGGGATGGTCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGAGCTCTCGCTGCCAAGGCTGGTTCAGGCACGCCAGAAGGATGCCGCAGACCTTTATCTGGCGGTAGATAT‑CGAATCCCTGCCGGTAGCGACTGCGACGTT‑CGATCTTGCATg < 2:463120/243‑1 (MQ=255) cg‑cCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAAAG‑TCACGCGGAGGGGACGGCCTTAGATCTCTCGCCGCCCAACATTGTTCAGGCACGCCAGAAGGATGCCCCCGACCATTATCTGGCGGGAGATAT‑CGAATCCCCGCCGTTAGCGGCTGCGCCCTT‑CGGTCTTGccaggggccatcc > 1:77923/1‑239 (MQ=255) agagTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGGGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCgc > 1:138916/1‑250 (MQ=255) gacgcttttcgtgataggcgtCCACAGCGT‑AAATCCCCCCACGGACGGGACGCG‑G‑TTGGGGCCCGTGGCTGGATGGGCCGCCACGGGCGGGAACG‑TCACGCTCAGGTGACGTCCTTAGATCACTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCGGGCGGGAGATAT‑CGAATCCCTTCCGTTAGCGACTTCGACGTG‑CGATCTTGCATGTAGCAATCTCGcagtgcagtg < 2:300717/231‑1 (MQ=255) gCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGGACG‑TCACGCGCAGGGGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCCGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAggggtg > 1:313734/1‑251 (MQ=255) aCTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAAAG‑CCCCGCGCCGGTGACGGCCCTAGAGCTCTCGCCGCCCATGCTTGGTCCGGCACCCCAGAAAGATGCCCCCGACCCATATCTTGCGGGGGATAT‑CGAATCCCTGCCGTTTACGTCTGCGCCGTT‑CGATCTTGCGTTGAGCAAtcttgccgtggaggggaggggtt > 1:263358/1‑231 (MQ=255) gtcAATG‑CTTCCACCGCGT‑AAATACACCCACGTCCTGGTCGCG‑GTTTGTGGCCC‑GGGCTGGATGAGCCGCCACTGGCGGGAACG‑GCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAAtt < 1:237847/249‑1 (MQ=255) cAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCAAGCGCAGGGGACGGCCTTAGATTTCTCGCCGCCCATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATTTTGCGGG‑GAAATTCGAAACCCCGCCCTTAGCGACTGCGGAGTT‑CGAGCTTTCATTGAGCAATATCGCAGGGCAGTGGGGCGGGAAtttt > 1:446422/1‑250 (MQ=255) agaaaatacccccctgtacgggccgcg‑GTTTGTGGCCC‑GGGCTGGATGCGCCGCCTCTGGGGGGAACG‑TCACGCGCGGGGGCCGGCCTTAGATCTCTCGCCGCCAATGCTGGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCcg < 2:263358/228‑1 (MQ=255) aaTACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGGGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCCGAAGGATGCCGCAGACCATTATCTGGCGGGGGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGGAATTTATCCACGGGACTCcgcgcg > 1:417992/1‑249 (MQ=255) tACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGGGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGGGCGGTAATTTTTCCACCGCACTCCGCGAGCt > 1:173966/1‑251 (MQ=255) aacccccACTTACTGGACGCG‑GGTTGTGGCCC‑TGGCGGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCt < 1:14520/247‑1 (MQ=255) cacCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGGACG‑TCACGCGCAGGGGAAGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCCTTATCTGGCGGGAGATAT‑CCAATCCCTGCCGTTAGCGACTGCGGCCTT‑CGATCTTGCCTGGAGCAATTTCGCAGGGCAGTTGGGCGGTAATTTATCCACGGCACTCCGCGAGCTGt > 1:134585/1‑251 (MQ=255) cctcgttccTGGTCGCG‑TGTTGTGGATC‑GGGCTGGATTGCCCGCCGCTGGCGGAAACG‑CCACGCGCAGGTGACGGCCTTAGATCCCGCGCCGCCAATGCTTGTTAAGGCACGCAAGAAGGATACCGCAGACCATTTTCGGTCGGGAGATAT‑CGAATCCCTGCCGGTAGCGACTGCGACGTT‑CGAGCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCGCGGCACTCCGCGAGCTGTAt < 2:22363/243‑1 (MQ=255) cGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGAGGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCggg < 1:346360/251‑1 (MQ=255) cTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGGTCTCTCGCCGCCCATGCTTGTTCAAGGACGCCCGAAGGATGCCGCAGACCATTATTTGGCGGGGGATAT‑CGAATCCCTGCCGTTAGCGACTGCGGCGTTTCG‑TCTTTCATTGAGCAATCTCTCTGTGCAGGGGGGGGGGAAATTTTCCCCGGGCCTCCGCGAGCTGTATCggggggg > 2:93936/1‑247 (MQ=255) ggccggg‑ggTTGGGGACC‑GGGGTGGTGGAGCCGCCACTGGCGGGAACT‑TCACGCGCAGGTGACGGCCTTAGATCCCCCGCCGCCAATGCTGGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCGGGCGGGAGATAT‑CGATTCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGggtggt < 1:84715/243‑1 (MQ=255) aCGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAAAG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGGAAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGGTCTTGCATGGAGCAATCTCGCCGTGCCGTGGTGCGGTAATTTATCCCCGGCACCCCGCGGGCTGTATCGggtggggggc > 1:381909/1‑246 (MQ=255) cggg‑ggTTGTGGCCC‑GGGGTGGAGGAGCCGCCCCTGGCGGGACCG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGcc < 2:379219/248‑1 (MQ=255) cggg‑ggTTGTGGACC‑TGGTTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGcc < 1:139526/248‑1 (MQ=255) cgcg‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGcc < 1:104428/251‑1 (MQ=255) g‑ggTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTGAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCa < 1:123878/251‑1 (MQ=255) tgGACC‑TGGCTGGATGAGCCGCCACTGGCGGCAAAG‑TCACGCGCAGGGGACGGCCTTAGATCTCTCGCCGCCCATGCTTGTTCAGGCACGCCCGAAGGATGCCGGAGGCCATTATCTGGCGGGAGATAT‑CGAATCCCCGCCGTTAGGGGCTGCGGCGTT‑CGATCTTGCATGGAGACATCTCGCAGTGCAGTGGGGCGGTAATTTATTCACGGCACGCCGCGAGCGGGATAGGGGGGGGCGCCCCAAAGGCg > 1:168452/1‑251 (MQ=255) ggCGGGACCG‑TCACGCGGGGGTGAGGGCCTTAGATCTCCCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCTCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCa < 2:364562/250‑1 (MQ=255) | GCGCATGAAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCG‑CCAGAGTGCTGACGCCTTACTGGCAATG‑CTTCCACAGCGT‑AAATACACCCACGTACTGGACGCG‑GGTTGTGGACC‑TGGCTGGATGAGCCGCCACTGGCGGGAACG‑TCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATAT‑CGAATCCCTGCCGTTAGCGACTGCGACGTT‑CGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCA > NC_000913/811479‑811949 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |