| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,549,037 | T→C | V77A (GTC→GCC) | fimH → | type 1 fimbriae D‑mannose specific adhesin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,549,037 | 0 | T | C | 98.1% | 177.4 / ‑5.9 | 52 | V77A (GTC→GCC) | fimH | type 1 fimbriae D‑mannose specific adhesin |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (21/30); minor base G (1/0); total (22/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
ATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAAC > NC_000913/4548799‑4549278 | atgatTGTAATGAAACGAGTTATTCCCCTGTTTGCTGTACTGCGGATGGGCTGGTCGGTAAATGCTTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACg < 1:341228/251‑1 (MQ=255) gTAATGAAACGAGTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGAGGCAGCGCCCATTGTTATGTAAAACCTGAGCCCGTCGTGTATGTGGGGCCAAACCTGGGCGTGGGTCTTTCGACGCCAAACTTTTGCCATTACGAATAT‑CCGGGAAACAATAAAAACTATGCCACCCTGAAACGaagacc > 2:182944/1‑246 (MQ=255) tAATGAAACGAGTTATTCCCCTGTTTGCTGTACTGCTGAGGGGCGGGTCGGTAAATGCCTGTTCATGCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTc < 1:152715/250‑1 (MQ=255) gaacctaGTTATTCCCTTGTTTGCTGTACTCGTGAGTGGCTGGTGGGTAATTCCTTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCt < 2:310122/244‑1 (MQ=255) aGTTATTCCCCTTTTTGCTTTCCGGGTGAGGGGTTGGTAGGTAAATGCCTGGTCATCCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAG‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATggcg < 2:95559/251‑1 (MQ=255) ttattcCCCTGTTTCTTGTACGGCTGATGGGTTGGTCGGTAAATGCCTGGTAATTCGCCTGAAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATggcgg < 1:276462/250‑1 (MQ=255) tattaCCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAAACTGGGCGTGGGTCTTTCGACGCCAATCTTTTGCCATAACGATTAT‑CCGGAAAACATTACAGACTATGCCACACTGCCACGAGGCTCGGCtttttggggcg > 1:15337/1‑242 (MQ=255) tgcgttACTGCTGAGGGGCGGGGCGATAAATGCCTGGTCATCCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑t < 2:118839/245‑1 (MQ=255) tgctgATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCCACAATTTTGTAAACCTTGCGCCCGTCGTGAAATTTGGGCAAAACCTTGTCGTGGATCTTTTTACGCAAATTTTTTTCCATAACAATTTT‑CCCGGAACCATTTCACACTAATCCACACTGCCACACGGCTCGGCTTTTTGCGGCTGGTTATTTAACTTTTTCCgg > 2:305571/1‑251 (MQ=255) tactgAGGGGCTGGGCGGTAAATGCCTTGTCATCCGCTTGAAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGATTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTGTCCgg < 2:138158/248‑1 (MQ=255) aTGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGGGCCCATGTTTTTGAAAACCTTGCGCCCCTCGGGGATGTGGGGCAAAAACAGGGCGTGGACCTTTTGACGCAAATCTTTTGCCATAACGATTAT‑TCGGTAACCAATACAGACTATGGCACACCGCAACGAGGCTCGGCTTTTTGCGGCGCGGTATCTAAATTTTTCCGGGCCCg > 1:199056/1‑251 (MQ=255) aTGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGAGGCAGCCCCCAAGTTTATGTAAACCTTGCGCCCGGCGTGAATGTGGGGCAAAACCTTGTCGGGGATATTTTGTCGCAAAACTTTTTCCATAAAGGTTAT‑CCGGAAAACATTACAGACTATGCCACAATGCAACGAGGACCGGCTGTTGGCGGGGGGTTATTTAA‑tttttttggggcccg > 1:298237/1‑241 (MQ=255) ggCTGGTCGGTAAGTGCCTGTTCATACGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTaaa < 1:8190/251‑1 (MQ=255) aaaTGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGGAGGGCCACTGTTTATGTAAACATTGCGCCCGTCGGGGATGTGGGGGAAAACCAGGTCGTGGGTCTTTTTGCGCCAAACTTTTTTCCTAACGATTATTCCGGAAAC‑ATTTCAGCCCATGCCACACTGCAACGAGGCTCGGCTTATTGCGGCGCGGTTTCTAT‑TTTTTcctgggccgggaaatattaatgg > 2:30766/1‑229 (MQ=255) tcgactgaaaaaCCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTAGGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCAtt < 2:182788/242‑1 (MQ=255) acccGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTAccacca < 2:15337/249‑1 (MQ=255) cGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGTGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCcgcgcg < 1:30766/251‑1 (MQ=255) gCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACg < 1:319139/251‑1 (MQ=255) cAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAACACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAACTATAGTGGCCGTAGCTATCCCTTTCCTCCCACCAGCGAACCCCCTCGCGTTGTTTATACTTCGAGAACgg > 2:23247/1‑251 (MQ=255) aGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCGTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGa < 1:443146/251‑1 (MQ=255) gcCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTGTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAAGTCTAGAACGGATaa < 2:417284/251‑1 (MQ=255) cAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACATGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGc > 1:284602/1‑251 (MQ=255) gTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGt < 1:288112/250‑1 (MQ=255) ttATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTgg < 1:316513/250‑1 (MQ=255) aTGTAAACCTGGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCTAGAACGGATAAGCCGTGGcct < 2:433014/251‑2 (MQ=255) gcgcCCGGCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCttt < 1:23247/250‑1 (MQ=255) ggggCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGc < 1:305571/250‑1 (MQ=255) cAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTgc < 1:257376/251‑1 (MQ=255) aCCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTgcgggc < 1:182944/251‑1 (MQ=255) ccTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGGAACGCCGCGCGTTGTTTATAATTCgag > 1:247722/1‑195 (MQ=255) ccTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCgag < 2:247722/195‑1 (MQ=255) cGTGGATCTTTCGACGCAAATCGTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTg < 2:176305/250‑1 (MQ=255) ggATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCAACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGGCCGAAAAATATAGTGGCAAGAGCTATCCATTTCCTAACACCAGAGCAAAGCCGCGCGTTGTTTATAATATGAGAACGGATAAGCCGTGGCCGGGGGCGCTTTTTTTGTAGCCTGTGAGCAGGGCGGGCggggggggg > 2:450341/1‑245 (MQ=255) ttCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTaa > 1:413916/1‑249 (MQ=255) aaagcTTTTGCCATAACGATTAG‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTTTTATCTAA‑TTTTGCCGGGACCGTAAAATATAGTGGCAGTAGCGCTCCAtt < 2:310863/126‑1 (MQ=255) aaaTCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGCCCGTAAAATATAGTGGCAGTAGATATccctt > 1:310863/1‑127 (MQ=255) cTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTa > 1:92243/1‑250 (MQ=255) tttGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAAtt > 1:460289/1‑251 (MQ=255) tGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTg < 1:111722/250‑1 (MQ=255) cATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGt > 1:159230/1‑251 (MQ=255) cATAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGt > 1:376537/1‑251 (MQ=255) aTAACGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTg < 1:379989/251‑1 (MQ=255) cGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAAc > 2:325755/1‑132 (MQ=255) cGATTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAAc < 1:325755/132‑1 (MQ=255) aTTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCggg > 2:169537/1‑167 (MQ=255) aTTAT‑CCGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTg < 1:169537/169‑1 (MQ=255) tAT‑CCGGCAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTTTCCATTTCCTACCACCCGCGTAACGCCGCGCGGTGGTTATAATTCGAGAACGGATAAGCCCTGGCCGGGGGCGCTTTATTTGCCGCCCGTGAGCAGGTCGGGCGGGGGGGCGGTTAAAGCTGGCGCCTTAATTTCCGTGATTAtttt > 2:49561/1‑251 (MQ=255) cGGAAACCATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCgc > 1:209036/1‑250 (MQ=255) ccATTACAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGGAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGGTTAAAGCTGGCTCATTAATTGCCGGGCTTATTTTGCGACAGAcc > 2:136146/1‑251 (MQ=255) cATTACAGACTATGCCACTCTGCAACGAGGCTCGTCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGTCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTGATTTTGCGACAGACca < 2:43631/251‑1 (MQ=255) cATTACAGACTATGCCACACTGCACCGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAACATATAGTGGCAGTAGGTATCCATTTCCTACCAACAGCGAAAAGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTTACGCCTGTGAGCACTGCGGGCGGGGGGGCGATTAAAGATGGACCCTTAATTGCCGTGCTTATTTTTCgaccgacc > 2:165496/1‑250 (MQ=255) cAGACTATGCCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCaacaac < 2:284602/251‑1 (MQ=255) | ATGATTGTAATGAAACGAGTTATTACCCTGTTTGCTGTACTGCTGATGGGCTGGTCGGTAAATGCCTGGTCATTCGCCTGTAAAACCGCCAATGGTACCGCTATCCCTATTGGCGGTGGCAGCGCCAATGTTTATGTAAACCTTGCGCCCGTCGTGAATGTGGGGCAAAACCTGGTCGTGGATCTTTCGACGCAAATCTTTTGCCATAACGATTAT‑CCGGAAACCATTACAGACTATGTCACACTGCAACGAGGCTCGGCTTATGGCGGCGTGTTATCTAA‑TTTTTCCGGGACCGTAAAATATAGTGGCAGTAGCTATCCATTTCCTACCACCAGCGAAACGCCGCGCGTTGTTTATAATTCGAGAACGGATAAGCCGTGGCCGGTGGCGCTTTATTTGACGCCTGTGAGCAGTGCGGGCGGGGTGGCGATTAAAGCTGGCTCATTAATTGCCGTGCTTATTTTGCGACAGACCAACAAC > NC_000913/4548799‑4549278 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |