New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 291398	NA (NA)	4 (0.090) +CCC	4/476	2.3	100%	noncoding (4/768 nt)	IS1	repeat region
	?	NC_000913	= 4542158	0 (0.000)					coding (122/597 nt)	fimE	regulator for fimA

ACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCGAGTACACACCGCAAATCAAGTCGTTGAAAGATGAGCGTAAAGAGGCCTA  >  NC_000913/291156‑291648                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                           aCGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAtt                                                                                                                                                                                                                                                    >  1:465995/1‑251 (MQ=31)        tCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGTGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGc                                                                                                                                                                                                                                              <  2:70727/250‑1 (MQ=18)          aTGGCCATATCAATGATTTTCTGGTGCGTCCCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTACGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAAttttacgcccg                                                                                                                                                                                                                                           >  2:216792/1‑244 (MQ=9)                atatCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCGGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGCACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCATTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGtt                                                                                                                                                                                                                                     <  2:82490/251‑1 (MQ=255)                                       aCCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCt                                                                                                                                                                                                              >  1:327436/1‑251 (MQ=255)                                         agggTTGAGACGCGGTGTAAGTGGACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGGGAGAGCGCTGATGGCCGGCAGTGCTTTTGCCGGTACACACCAACCCGTCAGTAGCTGCCCCGGAGGGTCAGCAGATAGCAACAGAAGCAACTGTTGCACCTCAAAAAAACCATCATAAAGTAACTCAGTAAGTTGGCAGAATCACCGAATTTTCAGCCAGGATGTTTCCCGTACCTATGTCAAATATCt                                                                                                                                                                                                              >  2:419001/2‑249 (MQ=9)                                           ggTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCTCCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGcc                                                                                                                                                                                                          <  1:385244/251‑1 (MQ=255)                                            ggtGAGAAGCGGTGTAATTGAACTGCAGTTGCTATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCATTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACGAAATCAGTAAGTTGGCAGCATCTCCGAATTTTCAGCCCGGATGTTGCACGTACCTATGTCGAataatgggccg                                                                                                                                                                                                         <  2:310005/249‑9 (MQ=14)                                               gagaAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATa                                                                                                                                                                                                      <  1:232254/251‑1 (MQ=255)                                                 gaAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAg                                                                                                                                                                                                    <  1:74034/251‑1 (MQ=255)                                                            aGTGAACTGCAGTAGCCATGTTTTACGGCCGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCATTTGCCGTTACGCACCACCCCGTCCGTACCTGAACAGGAGGGCCAGATGATAGACACAGAAGCCACTGGCGAACCTCAACAACACCATCATCAAATAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCACGGCTTTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCg                                                                                                                                                                                         >  2:85087/1‑251 (MQ=17)                                                             gTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTCCGCCCCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCCGTACGTTGGCAGCATCACCGAATTTTCAGCCCGGCTGTTTAACGTACCTATGTCGAATATCTGGCCGATACGGTTGCGGATCgg                                                                                                                                                                                        >  2:444047/1‑250 (MQ=17)                                                               gAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGCTGTCCGGCAGTGCTTTTGTCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCg                                                                                                                                                                                         >  1:35599/1‑248 (MQ=255)                                                                     cAGTTGCCATGTTTTACGGCAGAGAGTGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGAACCACCCCGACAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGAACGAGAAGAgg                                                                                                                                                                                 >  2:451725/1‑250 (MQ=255)                                                                      aGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAAGCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGAt                                                                                                                                                                               <  2:465995/251‑1 (MQ=255)                                                                           ccATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGAGCGAGAAGAGGATGCaga                                                                                                                                                                          <  2:23560/251‑1 (MQ=255)                                                                           ccATGTTTTACGGCAGTGAGAGAAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGc                                                                                                                                                                             >  1:127726/1‑248 (MQ=255)                                                                                  ttACGGCAGTGAGAGCAGAGATCGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCATAGGAatat                                                                                                                                                                   >  1:381290/1‑251 (MQ=255)                                                                                     cGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGTATGCAGAGGAATATCTg                                                                                                                                                                <  2:315649/251‑1 (MQ=255)                                                                                            gagaGCAGAGATAGCGCTGATGTCCGGCCGTGCTTTTGCCGTTACGCAACACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTGTCACGTACCTATGGCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCa                                                                                                                                                          <  2:154944/250‑1 (MQ=255)                                                                                                 cAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATATGGAAGCAATCATg                                                                                                                                                    >  2:321687/1‑251 (MQ=255)                                                                                                   gagaTAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGCAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATgg                                                                                                                                                   >  1:286306/1‑250 (MQ=255)                                                                                                            cTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCgtgt                                                                                                                                         >  2:89457/1‑251 (MQ=255)                                                                                                                    cGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTg                                                                                                                                 >  2:41898/1‑251 (MQ=255)                                                                                                                        aGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTgg                                                                                                                             <  1:260657/251‑1 (MQ=255)                                                                                                                                    gTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACATATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGt                                                                                                                 >  1:81467/1‑251 (MQ=255)                                                                                                                                             caccCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGGGTTACCGTTGCTGGCATGGGGCTGGTGATGGAggg                                                                                                        >  2:148297/1‑250 (MQ=255)                                                                                                                                                cccGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCa                                                                                                     <  2:327436/251‑1 (MQ=255)                                                                                                                                                        tAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAGAAACACCATCATACACTAAATCCGTAAGTTGGCAGCATAACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATAGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCCTGGAGGCTCGTGTTACCGTTGCCGGAATGGGGCTGATGATGGAGGTGCAGGATTACt                                                                                             >  1:456997/1‑251 (MQ=37)                                                                                                                                                         aGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTc                                                                                                                                             >  1:259700/1‑202 (MQ=255)                                                                                                                                                                    atggACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACTTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGGGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGGGACCGTGGCTGGCATGGGGCTGGTGATGGAGGTGCTGGATTACTTCTATGGCGaag                                                                                 <  2:275571/249‑3 (MQ=37)                                                                                                                                                                           gCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAg                                                                          <  1:96177/251‑1 (MQ=255)                                                                                                                                                                                      cAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAgg                                                               <  1:376440/251‑1 (MQ=255)                                                                                                                                                                                                     cACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCGCGGATGTTTCACGTACCTATGGCGAATAACTGGCCGAGAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCAGGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCGGGTGATGGAGTTGCAGGATTACTTCGATGGCGTGGCCGATAGACGGGCGAATGCGTGGGTGGGCGAGt                                                <  2:35599/251‑1 (MQ=255)                                                                                                                                                                                                        cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCGAGTac                                              >  1:103747/1‑250 (MQ=255)                                                                                                                                                                                                          cAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCGAGTacaca                                           <  1:41898/251‑1 (MQ=255)                                                                                                                                                                                                           aaaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCGAGGacacac                                          >  1:378156/1‑251 (MQ=255)                                                                                                                                                                                                            aaaaccccatactacgcTAAATCAGTCCGATGGCAGCATCACCGAATTTTCAGACCGGATGTTTCAAGTACCTATGTCGAATATCTGGCCGATATGGTTGCGAATCGCGAAGAGGATGCAGAGGACTATCTGGAAGCAATCATGGAGGCTCGTGTTACAGTTGCTg                                                                                                                              >  2:200680/17‑166 (MQ=255)                                                                                                                                                                                                            aaaaCACCATCAGACACGAAATCAGTAAGTTGGCAGCATCACCGAATGTTCAGCCCGGATGTTTCACGTACCGATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGAGGCAGAGGAATATCTGGAAGCAATCATGGAGTCTCGTGTTACCGTTGCTg                                                                                                                              <  1:200680/166‑1 (MQ=255)                                                                                                                                                                                                                  ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCGAGTACACACCGCAAAt                                   >  1:208181/1‑251 (MQ=255)                                                                                                                                                                                                                        tACACTAAATCAGTCAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGCGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGTGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGAGGCGGGCCGAGTACACACCGCAAATCaggtt                             >  2:71824/1‑247 (MQ=255)                                                                                                                                                                                                                         acccTAAATCAGTTAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTGCACGTACCTATGTCGAATATCTGGCCGATAAGGGTGCGGATCGAGAAGAGGATGCAGAGGAATATCGGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGATTGGCGAAGGCGTGGCTGGCCGAGTACACTCCTCAAATCaattc                             <  2:335616/247‑4 (MQ=255)                                                                                                                                                                                                                         acacTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCGAGTACACACCGCAAATCAAGTCg                            <  1:148297/251‑1 (MQ=255)                                                                                                                                                                                                                                      aaGTTGGCAGCATCACCGAATTTTCAGCCCGTATGTGTCACGTCCCTATGTCGAATATCTGGGCGATAAGATTGCGGAGCTAGAAGAGGATGCATATGAATATCTGGAAGCAATCATGGAGGTGCTTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATATACTGCCGAAGGCGTTGCTGGCCGAGTACACACCGCAAATCAAGTCGTTGAAAGATGAGc               <  1:401309/251‑1 (MQ=255)                                                                                                                                                                                                                                        gTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGc                                                                                                      >  1:185397/1‑162 (MQ=255)                                                                                                                                                                                                                                        gTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTGGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCGCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGc                                                                                                      <  2:185397/162‑1 (MQ=255)                                                                                                                                                                                                                                                caTCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAAAGGATGCAGAGGAATATCTGGAAGCCATAATGGAGGCTCGTGTTACCGGTGCTGGCATGGGGCTGGGGATGGAGGTGCAGGATTACTTCGATGGCGAGGACGATAGACTGGCGAAGGCGTGGCTGGCCGAGTACACCCCGCAAATCAAGTCGTTGAAAGATGAGCGTAAAGCGGc     >  1:432994/1‑251 (MQ=255)                                                                                                                                                                                                                                                 aTCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCTAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTGGCTGGCATGGGGCGGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCGAGTACACACCGCAAATCAAGTCGTTGAAAGATGAGCGTAAAGAGGcc    <  2:127726/251‑1 (MQ=255)                                                                                                                                                                                                                                                   cACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGGCTGGCGAAGGCGTGGCTGGCCGAGTACACACCGCAAATCAAGTCGTTGAAAGATGAGCGTAAAGAGGCCTa  <  1:321687/251‑1 (MQ=255)                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                           ACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCGAGTACACACCGCAAATCAAGTCGTTGAAAGATGAGCGTAAAGAGGCCTA  >  NC_000913/291156‑291648

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.