| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,580,649 | IS5 (–) +4 bp | coding (811‑814/1395 nt) | hsdS ← | type I restriction enzyme EcoKI specificity subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 25 (0.560) | 22/482 | 0.7 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 4580652 | 0 (0.000) | coding (811/1395 nt) | hsdS | type I restriction enzyme EcoKI specificity subunit | |||||
| * | ? | NC_000913 | = 3653230 | NA (NA) | 35 (0.780) | 33/482 | 0.3 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 4580649 = | 0 (0.000) | coding (814/1395 nt) | hsdS | type I restriction enzyme EcoKI specificity subunit | |||||
TGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2289159‑2288919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTTATTGAAAAAATTACAACATCAAAATTTGCTATATCCTGATAAACTTATTCGAGCTCGATTAACCAAAGATGCTTTACCAGAATATATCGAAATATTTTTTTCATCCCCCTCAGCACGAAATGCAATGATGAAC < NC_000913/4580652‑4580416 TGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGT < 1:129309/250‑1 TGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTC > 2:350466/1‑249 AACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGTAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACC < 1:462046/251‑1 AACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACC < 2:36954/251‑1 GGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGCAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACCGCC > 1:29861/1‑250 AAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTT < 1:334810/188‑1 AAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTT > 2:334810/1‑188 AATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAG < 2:57606/181‑1 AATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAG > 1:57606/1‑181 ATGATAAGTCAGTGGGAGAGATCTCACTACAAACTGGGGATAACGCCTCAAAAGGCGACGAAACGGACTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTACCCGCTTATTCGCCCCTTCCCTCGAATGTTGAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGG > 2:447420/1‑250 GGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGT > 2:369989/1‑251 ACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTTATT > 1:164598/1‑251 GGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTTATTGA > 2:266822/1‑250 CTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTTATTGAAAAAATTACAAC > 1:427020/1‑251 GATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGGACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGCAGTTTAGAATTTGTTGGTGTTTGTGGGTTATTGAAAAAATTACAACATCAAAATTTGCTATATCCTGATAAACTTATT > 2:144516/1‑251 ATTCAAGGCATTTACGGGCGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCAGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTTc > 2:325866/1‑201 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTCTTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAG > 1:292583/1‑140 ATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTAAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTTATTGAAAAAATTACAACATCAAAATTTGCTATATCCTGATAAACTTATTC > 1:205984/1‑251 TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTTATTGAAAAAATTACAACAT > 1:272182/1‑218 GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTTATTGAAAAAATTACAACATCAAAATTTGCTATATCCTGATAAACTTATTCGAGCTCGATTAACCAAAGATGCTTTACC > 1:65772/1‑250 AGAAATGAAATGACTGAGTCAGCCGAGAAGACTTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTT > 2:27491/1‑160 GAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTTATTGAAAAAATTACAACATCAAAATTTGCTATATCCTGATAAACTTATTCGAGCTCGATTAACCAAAGATGCTTTACCAGAATATATCGAAATATTT > 1:70618/1‑251 TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACCGCCCCAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTTATTGAAAAAATTACAACATCAAAATTTGCTATATCCTGATAAACTTATTCGAGCTCGATTAACCAAAGATGCTTTACCAGAATATATCGAAATATTTTTTTCATC > 2:331344/1‑251 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTTATTGAAAAAATTACAACATCAAAATTTGCTATATCCTGATAAACTTATTCGAGCTCGATTAACCAAAGATGCTTTACAAGAATATATCGAAATATTTTTTTCATCCCCCTC > 1:344787/1‑251 TATTCGCACCTTCCCTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTTATTGAAAAAATTACAACATCAAAATTTGCTATATCCTGATAAACTTATTCGAGCTCGATTAACCAAAGATGCTTTACCAGAATATATCGAAATATTTTTTTCATCCCCCTCAGCACGAAATGCAATGATGAAC > 2:14794/1‑251 TGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2289159‑2288919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGAATGTTCAGAAAGTGAACTAAACCGCCACAAATTACAAGATGGAGATCTTTTATTTACTCGCTATAACGGAAGTTTAGAATTTGTTGGTGTTTGTGGGTTATTGAAAAAATTACAACATCAAAATTTGCTATATCCTGATAAACTTATTCGAGCTCGATTAACCAAAGATGCTTTACCAGAATATATCGAAATATTTTTTTCATCCCCCTCAGCACGAAATGCAATGATGAAC < NC_000913/4580652‑4580416 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |