| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,138,130 | C→T | P254S (CCG→TCG) | flgJ → | putative peptidoglycan hydrolase FlgJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,138,130 | 0 | C | T | 98.0% | 139.2 / ‑5.6 | 52 | P254S (CCG→TCG) | flgJ | putative peptidoglycan hydrolase FlgJ |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base T (28/22); minor base G (0/1); total (28/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.84e-01 | |||||||||||
TCATTTGATCCTCGCTCAGGCGGCACTGGAATCTGGTTGGGGGCAACGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCA > NC_000913/1137883‑1138378 | ccatTTGATCCCCGCCCAGGCGGCCCGGGAATCTGGTTGGGGGAAACGGCAATTCCGCCGCGAAAACGGCGAGCCGAGCTATTACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTcgc < 2:581723/250‑1 (MQ=255) gacccTCGCCCAGGCGGCACTTGAATCGGGTGGGGGGCAACGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGGTACTGAAATCACCACGTCTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTGTCGCGTCTACAGCTCGGAGCTGGAAGCCTTGGCGGATGATGTTGGGCTGTTAACGCGTAACTCGCGCTAc < 2:522731/247‑1 (MQ=255) tCCTCGCTCAGGCGGCACTGGAATCTGGTTGGGGGCAACGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTCTAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTAGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTAcgcc > 1:558701/1‑251 (MQ=255) tCCTCGCTCAGGCGGCACTGGAATCTGGTTGGGGGCAACGGCAAATCAGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGAATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTAcgcc > 2:188593/1‑251 (MQ=255) cccTCGCCCAGGCGGCACTGGAATCTGGTTGGGGGAAACGGCAAAGCCGCCGCGAAAACGGCGAGCCGAGGTATAACCTGTTTGGTGTCAAAGCCTCTTGCAAATGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTAcgcc < 2:122486/250‑1 (MQ=255) cTCGCTCAGGCGGCACTGGAATCTGGTTGGGGGCAACGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTAcgccgc > 2:65060/1‑251 (MQ=255) aGGCGGCACTGGAATCTGGTTGGGGGCAACGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCCACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTAGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCAGCAGTgacg > 2:184540/1‑251 (MQ=255) ggcggaattggacgatggctGGGGGCACCGGCAACTCCACCGCGAACACGGCGAGCCGCGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCCACTGGAAAGGGCCAGTTACTGAAATCACCACGCCTGAATATGAAACCGGCGACGCGCAGAAAGTAAAAGAGAAGTTTCGCGTCTACAGCACGTATCTGGAAGCCTTGTCGGCTTACGTTGGGCTGTTCACGCGTAACTCGCGCTACGCCCCCGTgacg > 2:271206/20‑250 (MQ=255) ggtcACTGGAATCTGGTTGGGGTAAAGGTCAAATCCGCCGCGAAAATGGCGAGACGAGCTATACCCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGTCCAGTTACTGAAATCCCAACGACTGAATATGAAAACGTCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCTTCTACAGCACGTATCTGGAAGCCTTGCCGGATTACGTTGGGCTGTTAACGCGTACCTCGCGTTACGCCGCCTTGACGAcc < 2:129538/248‑1 (MQ=255) cggcACTGGAATCTGGTTGGGGGCAACGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGAcc > 1:60900/1‑251 (MQ=255) aaaCGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCGGGCAATGGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATAGGAAAACGGCGAAGTGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCTTAACTCGCGCTACGCCGCCGTTTCCCCCTCCCCTAGTTTTGAACAGGGGGCGCAGGCACTAAAGGAcgcgt < 1:395969/251‑2 (MQ=255) cGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCt > 2:572643/1‑251 (MQ=255) ggCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGTAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCtc > 2:425665/1‑250 (MQ=255) gagcTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCg > 1:501798/1‑251 (MQ=255) agcTATAAGCTGTTTGGTGTCAAAACCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCATGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACCGTGGGCGCAGGCCCGACAGGACGCGGGCTATGCCCCCgc > 2:486621/1‑250 (MQ=255) gcTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACCGGACGCGGGCTATGCCACCGAt > 2:408726/1‑251 (MQ=255) aCCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGCACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCAc > 2:131407/1‑251 (MQ=255) ccTGTTTGGTGTCAAAGACTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACt > 2:208937/1‑251 (MQ=255) gtgtCAAGGCCTCTGGCAACGGAAAAGGGCCAGTTACTGAAATCCCCACATCTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAATTTTCGCGTCTTCAGATCTTATCTGGAAGCTTTGTCGGATTACGTTGGGCTGTTACCGCGTACCTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGc < 2:437698/251‑1 (MQ=255) tgtCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGCAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGc > 1:46424/1‑250 (MQ=255) aGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAACTCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGCGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGCTCCTCACTCTGACCGCAAACTc > 2:372395/1‑250 (MQ=255) ggCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACGGAATATGAAAACGGAGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCGGTTACCGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCTACCGATCCTCACTATGCCCGCAAACTCACCAACAt < 1:165079/251‑1 (MQ=255) gCAACTGGAAAGGGCCAGATACTGAAAACACCACGACTGAATATGAAACCGCCGAAGCGAAGAAAGAAAAGGCGAAGTTTCGCGTCTACAGCGCGTATCGGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCTCAACTCGCGCTCCGCCGCCGTGACGACCGCCGCGAGGGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATg < 1:501181/251‑1 (MQ=255) aCTGGAAAGGGCAAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAGCGCGTAACTCTCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGAtt < 2:90859/251‑1 (MQ=255) ggAAGGGGCAAGTTACGGAAATCACCACGACTGAATAGGAAGACGGCGAAGCGAAGAAAGGAAAGGCGAAGTTGCGGGGGTACAGCGCGTATCTGGAGGCCTTGTCGGATTACGTGGGGCGGTTAACGCGTAACTCGGGCTACGCCGCCGGGACGGCCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCGCACTATGCCCGCAAACTCACCAACAGGATGcag < 2:46870/251‑1 (MQ=255) gAAAGGGCCAGTTACTGCAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTcagc > 1:458578/1‑251 (MQ=255) ccAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGCAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCACACTCACCAACATGATTCAGCAGATGa > 1:185262/1‑250 (MQ=255) ccAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGGCGGATTACGTTGGGCTGTTAACGCGTAACGCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGAGCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGaa < 1:69329/251‑1 (MQ=255) tACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCg < 1:461762/250‑1 (MQ=255) aaaaTCACCACGACTGAAGATGAAACCGGCGAAGCGAAGAAAGTAAAAGCGAAGTGTCGCTCCTACAGCTCGTATCTGGAAGCCTTTTCGGATGACGTTGGGCTGTTACCGGGTATCCCGCGCTAGGCCGCCTTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGGCCTACAGGACGCGGGCTATGCCACCGAGCCTGACGATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATaa < 1:259482/249‑1 (MQ=255) aCTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTg > 2:440721/1‑249 (MQ=255) aCTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAg < 1:124040/251‑1 (MQ=255) atatGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTGGGCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCaaaa < 1:125482/251‑1 (MQ=255) aaaaCGGCGAAGGAAAGAAAGTAAAAGCGAAGTTTCGCGTCTACGGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTCCGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTAc < 2:389745/251‑1 (MQ=255) aaaCGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCCCTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTAc > 1:306851/1‑250 (MQ=255) ggCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGG‑CGCAGGCCCTACCGGACGCGGGCTATGCCAACGGTCCTAACTATGCCCGCAAACTCACCAACATGGTTTCGCCGATGAAATCGCAAAGCGAAAAGGGGAGGAAAACCTACAGTa > 1:241273/1‑249 (MQ=255) aagaaAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTg > 1:524467/1‑250 (MQ=255) caaaGTGAAAGCGAAGTTTCGCGTCTAGAGCTCGTATCTGGAAGCCTAGTCGGATTACGTTGGGCTGTTAACGCGAAACTCGCGATACGCCGCCGTGACGACCGCCGAGAGTGCGGAACAGGGGGCGCCGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCACACTCACCAACATGATTCAGCAGCTGAAATCGATCAGAGACACGGTGAGCAAAACCTACCGAATGAACATTGAt > 2:71237/2‑250 (MQ=255) aaGTAAAAGCGAATTTTCGCGTCTTCAGCGCGTATCTGGAAGCCTTGCCGGATTACGTTGGGCTGTTAACGCGTACCTCGCGCTCCGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAATGTGAGCAAAACCTACAGTATGAACATTGATAAt < 1:184540/251‑1 (MQ=255) aaaGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGtt < 1:271082/251‑1 (MQ=255) cTACAGCTCGTATTTAGAAACCTTGCCGCCTTACGTTGGGCTGTTAACGCGTAACTATCGCTACGACGCCGTATCGACCGCCGCGAGTAAGGAACAGGGGGCGCAAGCACTACATGACGCGCGCTATGCCACCCATCCTCCCTATGCCCGCAAACTCACCAACATGATTCAGCCGATGAAATCGATAACCGACAAGGTGCGCAAAACCTCCAGTATGTACATTGATAATCTGTTCTGAATAACTCAAATcc > 2:41591/1‑251 (MQ=255) tACAGCTCGTATCTGGCAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCg > 1:182575/1‑183 (MQ=255) aCAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAATCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCcgg > 1:476222/1‑251 (MQ=255) tATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAACCTCACCAACATGATTCAGCAGATGAAATCGATAAGCGCCAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGc > 2:238398/1‑251 (MQ=255) atcgggAAGTCTGGTCGGATTACGTTGGGGTGTTAACGGGTAACTCGCGGTACGCGGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAAGCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCt < 2:185262/247‑1 (MQ=255) ggAAGCCTTGTGGGATGCCGTTGGGCTGTTAACGCGTACCTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGTGTCGCTg < 2:388118/248‑1 (MQ=255) ggAAGCCTTGTCGGCTTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCt < 1:435029/247‑1 (MQ=255) ccTTGTCGGATTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGataat > 1:529247/1‑251 (MQ=255) aTTACGTTGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTaa < 1:133283/251‑1 (MQ=255) cGTTGGGCTGTGAACGCGAAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGCCGCTGCCGATAATACTCTGTAATTGa < 1:152951/251‑1 (MQ=255) ttGGGCTGTTAACGCGTAACTCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGa > 1:44932/1‑249 (MQ=255) gTTAGCGCGGAACTCGCGCTCCGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGAAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTtat < 2:469027/250‑1 (MQ=255) ccccGCGCTCCGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCa < 1:208937/250‑1 (MQ=255) | TCATTTGATCCTCGCTCAGGCGGCACTGGAATCTGGTTGGGGGCAACGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGAATAACTCAAGTCCGGCGGGTCGCTGCCGATAATACTCTGTAATTGAAGGCTTATAAGGAACCTCCA > NC_000913/1137883‑1138378 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |