Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,278,488 C→T P4S (CCA→TCA)  ghxP → guanine/hypoxanthine transporter GhxP

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,278,4880CT97.8% 148.3 / NA 46P4S (CCA→TCA) ghxPguanine/hypoxanthine transporter GhxP
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (22/23);  minor base G (0/1);  total (22/24)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

CAAGACAATAAAAGAGAAAAAAGCAGCAAACTTCGGTTGAAAAAGCCGCTATGATCGCCGGATAATCGTTTGCTTTTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGCCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTCATCGTCGTTCCAGGTATGTTGGGTAAAGCAGGCTTCCCGCCTGCGGCAGTTTTCGTTGCAACCTGTCTGGTTGCCGGACTCGGTTCTATCGTGATGGGTCTGTGGGCTAATCTGCCGTTGGCG  >  NC_000913/4278247‑4278730
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                        
cAAGACAATAAAAGAGAAAAAAGCAGCAAACTTCGGTTGAAAAAGCCGCTATGATCGCCGGATAATCGTTTGCTTTTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAgcg                                                                                                                                                                                                                                                  <  1:130747/250‑1 (MQ=255)
    aCAATAAAAGAGAAAAAAGCAGCAAACTTCGGTTGAAAAAGCCGCTATGATCGCCGGATAATCGTTTGCTTTTTGTACCTCCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGTAAGATAACGTTTCGCTGGCAGGGGATTGTCCTCCACGCATCTTGACGAAAATTAAGCTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGtcc                                                                                                                                                                                                                                             <  2:226190/251‑3 (MQ=255)
    aCAATAAAAGAGAAAAAAGCAGCAAACTGCGGTTGAAAAAGCCGCTATGATCGCCGGATAAGCGTTTGCTTGTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGAGTGTCCGCCACGCATCTTGACGAAAAGTAAACTCTCAGGGGATGTTGTCTTATGGCTACGTCATCAGCGCGTAc                                                                                                                                                                                                                                             <  2:247653/251‑1 (MQ=255)
             gagaAAAAAGCAGCAAACTTCGGTTGAAAAAGCCGCTATGATCGCCGGATAATCGTTTGCTTTTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTc                                                                                                                                                                                                                                    <  1:406398/251‑1 (MQ=255)
              agaAAAAAGCAGCAAACTTCGGTTGAAAAAGCCGCGATGATCGACGGATAATCGATTGCTTTGTTTACCACCCGTTTTGGATGCGCGGAGCTAATCGTTTGCTTTGTTGCGACGCAGCAAATTGTCGCAAACCGGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTTCGCCACGCATCTTGACGAAAATTAAACGCTCAGGGGATGTTTTCTTATGGCTACGTCATCAGTGCGTACCGGCGGTTCa                                                                                                                                                                                                                                   <  2:28794/251‑1 (MQ=255)
               gaAAAAAGCAGCAAACTTCGGTTGAAAAAGCCGCTATGATCGCCGGATAATCGTTTGCTTTTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCAc                                                                                                                                                                                                                                  >  1:504526/1‑251 (MQ=255)
                      gcagcaAACTTCTGTTGAAAAAGCCGCTATGATCGCCGGATAATCGTTTGTTTTTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGTCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCTTACCGGCGGTTCACTCGACGc                                                                                                                                                                                                                           <  1:307659/251‑1 (MQ=255)
                                 cGGTTGAAAAAGCCGCTATGATCGCCGGATAATCGTTTGCTTTTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTTGACTCCTGGTTTaaa                                                                                                                                                                                                                 >  1:462497/1‑250 (MQ=255)
                                 cGGTTGAAAAAGCCGCTATGATCGCCGGATAATCGTTTGCTTTTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGccctgttttaa                                                                                                                                                                                                                 >  1:319393/1‑241 (MQ=255)
                                  ggTTGAAAAAGCCGCTATGATCGCCGGATAATCGTTTGATTTTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTAATCAGCGCGTACCGGCGGGTCACTTGCCGCCCGGTTTaatat                                                                                                                                                                                                               >  2:406313/1‑248 (MQ=255)
                                          aaGCCGCTATGATCGCCGGATAATCGTTTGCTTTTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTTACTCGACGCCTGGTTTAAAATTTTACaa                                                                                                                                                                                                        >  1:454825/1‑250 (MQ=255)
                                               gCTATGATCGCCGGATAATCGTTTGCTTTTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACCTggg                                                                                                                                                                                                 >  1:431911/1‑250 (MQ=255)
                                               gCTATGATCGCCGGATAATCGTTTGCTTTTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCCGGGTTAAAAATTTACAACgaggg                                                                                                                                                                                                 >  1:185226/1‑247 (MQ=255)
                                                   tGATCGCCGGATAATCGTTTGCTTTTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCCCTCCACGCCTGGTTTAAAATTTctcaccgttggagc                                                                                                                                                                                               >  1:120955/1‑237 (MQ=255)
                                                                    tttGCTTTTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCCCGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGATCCATCGCCGCCTGGTTTAAAAATTTACAAACGGGCAGAACTTTCCGTCAGGAAggg                                                                                                                                                                           >  1:552107/1‑249 (MQ=255)
                                                                           tttttACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTACGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGcc                                                                                                                                                                    <  1:148802/250‑1 (MQ=255)
                                                                            ttttACCTCCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCg                                                                                                                                                                   <  1:474722/250‑1 (MQ=255)
                                                                                                 cgcgGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTACGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCCACGGCTGGTTTATAATTTTCCAACATGGAAGAACTGTTCCTAAGGAAAGGGTTGCCGGGATAACAAAGTTTTTGGCGAt                                                                                                                                            >  1:499424/1‑251 (MQ=255)
                                                                                                             cGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGt                                                                                                                                <  1:384996/251‑1 (MQ=255)
                                                                                                              gTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTc                                                                                                                               <  1:106136/251‑1 (MQ=255)
                                                                                                                 tGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTCAt                                                                                                                             <  1:110826/250‑1 (MQ=255)
                                                                                                                   cTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGGTTACTCAACGCCTGGTTTAAAATTTCACCACGGGGAAGCACTGTCCGTCCGGAAGTGGTTGCCGGGTTAACAACGTTTCTGGCGGTGGGTTACTCGGTCAtcgt                                                                                                                          >  1:353425/1‑251 (MQ=255)
                                                                                                                       tttGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCTCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGTCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTCATcgtcgt                                                                                                                       <  2:485139/250‑1 (MQ=255)
                                                                                                                         tGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTGGCCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTCATCGTCGTTc                                                                                                                     <  1:268026/250‑1 (MQ=255)
                                                                                                                             aCGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGGTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAAAAACGGTTCTGGCGATGGTCTCCTCGGTCATCGGCGTTcccggg                                                                                                                >  1:322279/1‑247 (MQ=255)
                                                                                                                                    aaaTTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGGCGCCTGGTTTTAAATTTCACAACCTGGGAGGACTGTCCGGCAGGGAGTGGTTGCCGGGTTAACAACGTTTCTGGCGGTGGTCTTCTCGGTCATCGTCGGTCCAGGTATGTTgg                                                                                                         >  2:467586/1‑251 (MQ=255)
                                                                                                                                              aaaCCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTCATCGTCGTTCCAGGTATGTTGGGTAAAGCAgg                                                                                               <  1:294673/251‑1 (MQ=255)
                                                                                                                                                   tGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTTACTCGGCGCCTGGTTTAAAATTTTACAACGTGGAAGCACTGTCCGGCAGGAAGTGGTTGCCGGGTTAACAACGATTCTGGCGGTGGTCTACTCGGTCATCGACGGTCCAGGTATGTTGGGTAAAGCAGGCTTcc                                                                                          >  1:104357/1‑251 (MQ=255)
                                                                                                                                                    ggAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTCATCGGCGTTCCAGGTATGTGGGGTAAAGCAGGCTTcc                                                                                          <  2:353425/250‑1 (MQ=255)
                                                                                                                                                    ggAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGGTTAAAATTTTATAACGTGGAAGAACTGTCCGGCAGGAAGAGGTTGCCGGGGTTAAAACGGTTCTGGCGATGGTCTACTCGGTCATCGTAGTTCCAGGTATGTTGGGTAAAGCAGGCTTccc                                                                                         >  1:18702/1‑251 (MQ=255)
                                                                                                                                                         cggAAGCTAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGGAGCACTGTCCCTCAGGAAGTGGTTGCCGGGGTTACCACGGTTCTGGCGCTGGTCTACTCGGGCATCGTCGCTCCCGGGATTTTGGGTAAAACAGGCTTCCCCCCtc                                                                                    >  2:64189/2‑250 (MQ=255)
                                                                                                                                                                aaacggtttgtggtcgggggATTGTCCGCCTCGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTAGGTCTACGGCATCAGCGCGTACCGGCGGTGCACTCGACGCCAGGTTTAAAATTGCCCAGCGGGGAAGCACTGTCCGTCAGGAAGTGGTTGGCGGGTTAACAACGTTACTGGCGATGGTCTCCCCGGTCATCGGCGTACCAGTCATTTTGGCTAAAGCAGGCTGCCCGCCTGCGGCAGt                                                                             <  2:569161/235‑1 (MQ=255)
                                                                                                                                                                            ggCAGGGGTTTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATTTCTACGTCATCAGCGCGTACCGGCGGTGCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAACATCGTTTCGGGCGATGGTCTACTCGGTCATCGTCGTTCCAGGTATGTTGGGTAAAGCAGGCTCCCCGCCTGCGGCAGTTTTCGTTGCatc                                                                 <  2:462497/251‑3 (MQ=255)
                                                                                                                                                                                   gATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTTACTCGACGCCTGGTTTTAAATTTTACAACGTGGAAAGACTGTCCGTCAGGACAGGGTTTCCGGGTTTACAACGGTTTTGGCGATGGTCTACTCGGTCATCGTCGTTCCCGGGATGTTGGGGAAAGCAGGCTTCCCGCCCGCGGCCGGTTTCGtttctacccgtttg                                                          >  2:426308/1‑239 (MQ=255)
                                                                                                                                                                                    aTTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTgg                                                                                                                                                                         <  1:171098/140‑1 (MQ=255)
                                                                                                                                                                                         ccGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCTTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTCATCGTCGTTCCAGGTATGTTGGGTAAAGCAGGCTTCCCGCCTGCGGCAGTTTTCGTTGCAACCTGTCTGGTTGcc                                                  <  2:185226/251‑1 (MQ=255)
                                                                                                                                                                                            ccACGCGTCTTGACGAAAATTAAACTCTCAGGGGATTTTTTCTTATGGCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTCATCGTCGTTCCAGGTATGTTGGGTAAAGCAGGCTTCCCGCCTGCGGCAGTTTTCGTTGCAACCTGTCTGGTTGCCGGa                                               <  1:96204/251‑1 (MQ=255)
                                                                                                                                                                                              ccGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTCATCGTCGTTCCAGGTATGTTGGGTAAAGCAGGCTTCCCGCCTGCGGCAGTTTTCGTTGCAACCTGTCTGGTTGCCGGACt                                             <  1:505232/250‑1 (MQ=255)
                                                                                                                                                                                              aCGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTACCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTCATCGTCGTTCCATGTATGTTGGGTAAAGCAGGCTTCCCGCCTGCGGCAGTTTTCGTTGCAACCTGTCTGGTTGCCGGACt                                             <  1:19458/251‑1 (MQ=255)
                                                                                                                                                                                                   tCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCTCCTCCTTGTTTTAAATTTTACAACGTTGGAGCACTGTCCGTCCGGAAGAGGGTGGCGGGGTAAACAAGTTTCTGGCGATGGTCTACTCGGTCATCGTCGGTTCAGGTATGTTGGGTAAAGCAGGCCTCCCGCCCTCGGCCGTTTTTGTTTCAAACCTTGTGGTTGCCGGGCTCgctt                                        >  2:175155/1‑248 (MQ=255)
                                                                                                                                                                                                            aaaTTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTTAAATTTCACAACGCGGAAGCACTGTCCGTCCGGAAGTGGGTGCCGGGTTAAAAACGTTTCTTGCGATGGTCTATTCGGTCATCGTCGTTCCAGGTATGTTTGGTAAAGCAGGCTTCCCCCCTGCGGCCGTTTTCGTTTCAACCCTGCTGGTTGCCgggccccgttctttctttg                               >  1:441700/1‑234 (MQ=255)
                                                                                                                                                                                                            aaaTTAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTCATCGTCGTTCCAGGTATGTTGGGTAAAGCAGGCTTCCCGCCTGCGGCAGTTTTCGTTGCAACCTGTCTGGTTGCCGGGCTCGGTTCTTTCGTgg                               >  1:486692/1‑250 (MQ=255)
                                                                                                                                                                                                              attaaatgctcAGGGGTTGTTTTCTTATGTCTACGTCATTAGCGCGTACCGGCGGTGCACTCGACGCCTGGTTTAAAATTTCGAAACGTGGAAGCACTGTCCGTCAGGAAGTGGTGGCCGTGTTAACAACGTTTCGGGCGATGGTCTTCCCGGTCTTCGTCGTGCCAGGTATGTTTGGTAAAGAAGGCTTCCCGCCTGCGGCAGTTTTCGTTGCAACCTGTCTGGTTGCCGGACTCGGTTCTATCGTGATg                             <  1:230413/243‑1 (MQ=255)
                                                                                                                                                                                                               ttAAACTCTCAGGGGATGTTTTCTTATGTCTACGTCATCAGCGCGTACCGGCGGGTCACTCGACGCCTGGTTTTAAATTTCACAACGTGGAAGCAATGTTCGTCAGGGAGTGGTTGCCGGGTTAACCACGGTTCTGGCGATGGGCTAATCGGGCATCGGCGTTCCAGGTATGTTGGGTAAAGGAGGCCTTCCGCCTGCGGCCGGTTTCTTTGGAACCCGTCTGGGTGCCGGGCTCGGTTTTATCgggttgg                            >  2:507028/1‑245 (MQ=255)
                                                                                                                                                                                                                                        aTGTCTACGTCTTCAGCGCGTACCGGCGGTTTTCTCGTCTACTTGTTTTAAATTTTACAACGTTGAAGCACTGTCCGTCAGGACGTGGTTGCCGGGGTTACAAAGTTTCTGGCGATGGTCTACTCGGGCCTCGTCGTTCCAGGTATGTTGGGTAAAGCAGGCTTCCCCCCTGCGGCCGGTTTTGTTGCACCCTTTCTTGTTTGCGGGCCCGGTTCTCTTTTGGTGGGTCTTTGTGCTTATCTGCCGGTgg  >  2:93771/1‑250 (MQ=255)
                                                                                                                                                                                                                                          gtttACGTCATCAGCGCGTACCGGCGGTTCCCTCGACGCCGGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGGGGTGGCCGGGTTAACAGCGTTTCTGGCGATGGTCTACGCGGTCATCGTCGTTCCAGGTATGTTGGGTAAAGCAGGCTTCCCGCCTGCGGCAGTTTTCGTTGCAACCTGTCTGGTTGCCGGACTCGGTTCTATCGTGATGGGTCTGTGGGCTAATCTGCCGTTGGCg  <  2:120955/247‑1 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                        
CAAGACAATAAAAGAGAAAAAAGCAGCAAACTTCGGTTGAAAAAGCCGCTATGATCGCCGGATAATCGTTTGCTTTTTTTACCACCCGTTTTGTATGCGCGGAGCTAAACGTTTGCTTTTTTGCGACGCAGCAAATTGTCGCAAACCTGGAGCAGGAAGATAACGTTTCGCTGGCAGGGGATTGTCCGCCACGCATCTTGACGAAAATTAAACTCTCAGGGGATGTTTTCTTATGTCTACGCCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTCATCGTCGTTCCAGGTATGTTGGGTAAAGCAGGCTTCCCGCCTGCGGCAGTTTTCGTTGCAACCTGTCTGGTTGCCGGACTCGGTTCTATCGTGATGGGTCTGTGGGCTAATCTGCCGTTGGCG  >  NC_000913/4278247‑4278730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: