| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,834,845 | C→T | S362N (AGT→AAT) | yicJ ← | putative xyloside transporter YicJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,834,845 | 0 | C | T | 97.4% | 259.7 / ‑4.8 | 77 | S362N (AGT→AAT) | yicJ | putative xyloside transporter YicJ |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (39/36); minor base G (1/1); total (40/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
GAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGT‑CGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACTTTACATTTCCAGTCGGTCAGAGGTTTTGCCAGTGC > NC_000913/3834600‑3835089 | gAGCCAGTTGTTCCATAACGGTTTGAAGATTGGGCGT‑CGTGAGTGAGTAGTAGCGTTTAGAGATAATCGCGCTCAGAAAATAACAGATCGCCGGAACAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGTTGTTCTGCGCTTTTCCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGa < 1:56159/249‑1 (MQ=255) gccaccttttCCATAACGGTTTTCAGATTGGGCGT‑CTTGAGGGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAAGAACAGATCGCCGAAACAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCTCTTTTTCTGCCGCATCATATCCGCCATAATCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATccc < 1:63973/243‑1 (MQ=255) ccAGCTGTTCCATAACGGTTTTCAGATTGTGCGT‑CGTGAGTGAGTACTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCCTAAGCCAGCATCCAGCCGCTAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAACCAGCGTCCCAGCAAAATTGATCCCg > 1:257512/1‑251 (MQ=255) gCTGTTCCATAACGGTTTTCAGATTGTG‑GTACGTGGGTGAGTAGGAGCGTTTAGCGATAATCGCGCTCAGCAAAAAACAGATCGCCGGAACAATCGTGAAT‑AGCGCAATAATGAGGCTAATCGGGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAAGTGATCCCgg < 2:348214/249‑1 (MQ=255) cGGTTTTCAGATTGTGCGT‑CGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTAcc > 1:131283/1‑250 (MQ=255) ggTTTTCAGATTGTGCGT‑CGTGAGTGATTAGTAGCGTTTAGCGATAAGCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTTAAT‑AGCGCAATAATGATGCTAATCTTGCCGCTTTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTCCCAt < 1:228886/251‑1 (MQ=255) tCAGATTGTGCGT‑CGTGCGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGcac > 2:269096/1‑251 (MQ=255) cAGATTGTGCGT‑CGTGAGCGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGACCAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGcacc > 2:88153/1‑251 (MQ=255) gtgCGT‑AGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCCAATAACAGATCGCCGGAACCATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTATGCCGCATCATATCCGCCATACGCCAGCATCCAGCCGCTAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCCAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGc > 1:68167/1‑251 (MQ=255) gCGT‑CGTGAGTGATTAGTAGCGTTTAGCAATAATCGCGCTCAGAAAATAACAGATCGCCGGAACAATCGTGAAT‑AGCGCAATAATGATGCTAACCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGcc < 1:557136/250‑1 (MQ=255) cgt‑cgtGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGt > 1:228223/1‑251 (MQ=255) cgtGAGGGAGTAGTAGCGTTTAGCGATAACCGCGCTCAGAAAAAAACAGATCGCCGGAACAATC‑TGGATGAGCGCATTAATGATCCTAATCGTGCCTCTTTTCTGCGCTTTTTCGGCCGCACCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCAGTGCACCACTCGCCGTAGt < 2:542873/251‑1 (MQ=255) ggagtagtagctttgatcaaaaaTCTCGCTCAGCAAATAACAGATCGCCAGAACAAACGTGAAT‑GGCACAATAATTAGGCAAATCTGGGCGTTTTTCTGCGCTTTTTCTGCCGAATCAAATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCTCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACgg < 2:266035/230‑1 (MQ=255) gagtAGTAGCGTTTAGCGATAACCGCTCTCAGAAAATAACAGATCGCCGGAACAATCGGGAAT‑AGCTCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACgg < 2:408022/250‑1 (MQ=255) agtagCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCg > 1:394248/1‑251 (MQ=255) agCGTTTAGCGATAATCGCGATCAGCAAATAACAGATCGCCGGAACAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGATGTTCTGCGCTTTTTATGCCGCCTCATATCCGCCCTAAGCCAGAATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCATTTACCATTGCACCACTCGCCGTAGTCGACGGTATCgaac > 1:516046/1‑248 (MQ=255) cgcgCTCAGCAAATAACAGATCGCCGGAACAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTAATCCCGGTCAGGCGTTTACCATTGCACCCCTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTgg > 1:25634/1‑250 (MQ=255) cgcTCAGCAAATAACAGATCGCCGGAACAATCGTGAAT‑AGAGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGAt > 1:499131/1‑250 (MQ=255) acAGCAAATAACAGATCGCCGAAACAATCGTGAAT‑AGCGTAATAAGGATTCTAATCGGGGGGCTTTTCTGCTTGTTTTCGGCCGCAACATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGgt < 2:358297/250‑1 (MQ=255) cAAATAACAGATCGCCGGAACAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTc > 2:172030/1‑250 (MQ=255) aaCAGATCGCCGGGACAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGACAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCCCAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGCCATCATTACCCACTGGCTAGGTGTCACCAgc > 2:244092/1‑250 (MQ=255) cccccGGAACAATCGTAAAT‑AGGCCAATAATAATGCCATCCGTGGCCTTGTTCTGCGCTTTTCCTGCCGCTTCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGc < 1:502595/248‑1 (MQ=255) cgcaggAACATTCTTGAAA‑AGCACAAAAATGATGCTAAGCGTGGCGCTGTTCTGCGCTTTTTCGGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCa < 2:106228/247‑1 (MQ=255) gCCGGAACAATCGTGACT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCa > 2:283466/1‑250 (MQ=255) gAACAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAacac > 1:305097/1‑250 (MQ=255) aTCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAACCAGCATCCCGCCGATAAGAGCGCCGCCGAAGCCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCAACAGTTGATGCAACACACCAAt > 2:305110/1‑251 (MQ=255) cGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTCCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCa < 1:78913/251‑1 (MQ=255) gggaaatagccaaataatGATGCTATTCGGGGCCCTGTCCCGCGCTTTTCCTGCGGCTTCATACCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTATTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCa < 2:338121/239‑1 (MQ=255) aaaaatGATGCTAATCGTGGCGTTTTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATATGTGTCACCAGTTGATGCAACACACCAATCACTAAGATGAAGa < 1:445169/248‑1 (MQ=255) aatGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGCAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGAcc > 2:30655/1‑249 (MQ=255) aatGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACa > 1:478204/1‑250 (MQ=255) aatGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACa < 1:227875/250‑1 (MQ=255) atgCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACAt > 1:8750/1‑251 (MQ=255) atgCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGACAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATCGGAGTCACCAGTTGATGCAACACACCAATCACGCAGATGAAGACAAACAt > 2:129699/1‑251 (MQ=255) cTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGt > 1:557990/1‑251 (MQ=255) tAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCAACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAAAATAGTg > 1:564149/1‑251 (MQ=255) gcgcTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGc < 1:209112/251‑1 (MQ=255) ggTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGc < 1:425839/250‑1 (MQ=255) tGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATggg > 1:275752/1‑251 (MQ=255) gcttttttcttgcgcactaatatCCGCCACAAGACAGTATCCAGCCGATAAGAGCTCCGCCGCAGCCCAATCCCAGTATTAGCACAAACAGCGTGCCAGCAAAATTGATCCCGTTCAGGCGTTTACCACTGCACCACTCGCCGTAGTCGACGGTATCGGTCACCATTACCCACGGGATAGGTGTCACCAGTGGATGCAACATACCAATCACGATTATGAAGACAAACATAGGGATGCTGGCCTGCATgtg < 2:118321/231‑3 (MQ=255) tttCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGACCaa > 2:100083/1‑249 (MQ=255) tgtCTGCCGCGTCATATCCGCCATAACACAACATCCAGCCGATACAAGCGCCGCCGAAGGCCAACCCCAGCTTGAGCACAAACAGCGTGACAGATAAATTGATCCCGGTCAGGCGTTTCCCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACCGGATAGGTGTAACCAGTTGCTGCCACACACCAATCACGAAGATGAAGACAAACATAGCGATGCTGGCCTGCATGGGAACaa > 2:236850/3‑249 (MQ=255) gCATCATCTCCGCAATAAGCCCGCATCCAACCGCTAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACCAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACCAACATAGTGATGCTGGCCTGCCTGGGAACAAGGAAAATcg > 2:387792/1‑250 (MQ=255) ctcatATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGAAATCATTACCCACTGGATAGGTGTCACCAGTTGATGCACCACACCAATCACGAAGATGAAGCCAAACATAGTGATGCTGGCCTGCATGGGAACAAAGCAAATcgcg > 2:412668/2‑250 (MQ=255) tatCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCt > 1:252889/1‑251 (MQ=255) ccGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGaa > 2:460013/1‑197 (MQ=255) ccGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGaa < 1:460013/197‑1 (MQ=255) ccGCCAGAAGCAGGCATCCAGCCGATAAGAGCGCCGCAGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCTGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGGGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAAt < 2:475804/251‑1 (MQ=255) cGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATc < 1:139230/251‑1 (MQ=255) cATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACt < 2:394248/251‑1 (MQ=255) tAAGCCAGCATCCAGCCGATACGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGCACATCGCGAGGCTAATCACTGc > 2:584086/1‑251 (MQ=255) cAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCTCTCGCCGTAGTCGGCGGTATCGGACATCATTa < 2:270528/134‑1 (MQ=255) cAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTa > 1:270528/1‑134 (MQ=255) aGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTc < 2:203945/251‑1 (MQ=255) aGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTc < 1:584086/251‑1 (MQ=255) agCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCaga < 1:434362/251‑1 (MQ=255) gcgcCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCagaa < 1:536896/251‑1 (MQ=255) cgccgcCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCaga > 2:56246/1‑249 (MQ=255) ccgccgAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCATCAAAATTGATCCCGTTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCTGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGTCAAACATAGTTATGCTGGCCTGCATGGGAACAAATAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGAt < 2:275210/251‑1 (MQ=255) ccgccgAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACAGCGCGATGCTAATCACTGCCAGCAGGGCTTTCGTCCACCAGAAGAt < 2:389725/251‑1 (MQ=255) cgccgAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGAt > 1:119875/1‑250 (MQ=255) aGGCCAACCCCAGTTTGAGCACAAACAGCGGGCCAGCAAAATTGATCCCGGTCAGGCGTTTTCCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACt < 2:432798/251‑1 (MQ=255) aGGCCAACCCCAGTATGAGCACAAACAGCGTGCCGGAAAAATTGGTCCCGGTCAGGCGTTTTCCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGGTGATGCAACACACCAATCACGAAGATGAAGACAAACATATTTATGCTGGCCTGCATGCGAACAAAGAAGATCGCGAGGCTAATCACTGCCAGCAGGGCGGTCGTCCACGAGAGCATAGTGACt < 2:400801/251‑1 (MQ=255) gCCAACCCCAGTTTGCGCCCAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGCCAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCAACCAGAAGCTAGGGACttt > 2:50873/1‑251 (MQ=255) aCCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACTTTACAt < 1:572027/251‑1 (MQ=255) gtttgcgaacacacaacGTGCCAGCAAAATTGATCCAGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTAGCCTGCATGGGAACAAAGCACATCGCGAGGCTAATCACTGCCAGCATGGCGTTCGCGCACCAGAAGAAAGAGACTTTACATTTca > 2:343416/17‑248 (MQ=255) gAGCACCAACAGCGTGCCAGCAACAGTGATCCCGGTCATGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTCTCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGACGATGAAGACAAACATAGTGATGCTGGCCTGCATGGAAACAAAGAACATCGAGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGAAAGTGACTTTACATTTCCAGTCgg > 2:211486/1‑251 (MQ=255) gAGCACAAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAATACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACTTTACATTTCCAGTCgg < 1:244092/251‑1 (MQ=255) acaAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACTTTACATTTCCAGTCGGTc > 1:2933/1‑249 (MQ=255) caAACAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCCCCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACTTTACATTTCCAGTCGGTCaga < 2:486990/251‑1 (MQ=255) aCAGCGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACTTTACATTTCCAGTCGGTCCGAGGt > 2:402647/1‑251 (MQ=255) cgtgtcatcAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGAGAGGTGTCACCAGTTGATGCAACACGCCAATCACGAAGATGAAGACAAACATAGTGATGCTGGTCTGCATGTGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACTTTACATTTCCAGTCGGTCAGAGGTTTTg < 2:539719/243‑1 (MQ=255) cGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCCGGGCGTTCGt > 2:198448/1‑204 (MQ=255) cGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACTTTACATTTCCAGTCGGTCAGAGGTTTTg > 2:534/1‑251 (MQ=255) cGTGCCAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAAGCACGGCCAGCAGGGCGTTCGt < 1:198448/204‑1 (MQ=255) ccAGCAAAATTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGGCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTTGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACTTTACATTTCCAGTCGGTCAGAGGTTTTGCCAg < 1:525311/251‑1 (MQ=255) gCAAAATTGATCCCGGTCCGGCGTTTACCATTGCACCACTCGCCGAAGTCGACGGTATAGGACATCATTACCCACTGGATAGGTGTCACCCGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAAAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCAACAGAAGATAGTGACTTTACATTTCCAGTAGGTCAGAGGTTTTGCCAGTGc > 2:565190/1‑251 (MQ=255) | GAGCCAGCTGTTCCATAACGGTTTTCAGATTGTGCGT‑CGTGAGTGAGTAGTAGCGTTTAGCGATAATCGCGCTCAGCAAATAACAGATCGCCGGAACAATCGTGAAT‑AGCGCAATAATGATGCTAATCGTGGCGCTGTTCTGCGCTTTTTCTGCCGCATCATATCCGCCATAAGCCAGCATCCAGCCGATAAGAGCGCCGCCGAAGGCCAACCCCAGTTTGAGCACAAACAGCGTGCCAGCAAAACTGATCCCGGTCAGGCGTTTACCATTGCACCACTCGCCGTAGTCGACGGTATCGGACATCATTACCCACTGGATAGGTGTCACCAGTTGATGCAACACACCAATCACGAAGATGAAGACAAACATAGTGATGCTGGCCTGCATGGGAACAAAGAACATCGCGAGGCTAATCACTGCCAGCAGGGCGTTCGTCCACCAGAAGATAGTGACTTTACATTTCCAGTCGGTCAGAGGTTTTGCCAGTGC > NC_000913/3834600‑3835089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |