Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,050,472 G→A L66L (CTG→TTG)  gcvT ← aminomethyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,050,4720GA97.1% 231.8 / NA 70L66L (CTG→TTG) gcvTaminomethyltransferase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (28/40);  minor base C (2/0);  total (30/40)
Fisher's exact test for biased strand distribution p-value = 1.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

CACGGCAATCATGGAAAGGTCATCACGAACGGTAATTTCGATGCCGAAAGGTTCAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACAACTTTTTCATGGTG  >  NC_000913/3050227‑3050711
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                
cACGGCAATCATGGAAAGGTCATCACGAACGGTAATTTCGATGCCGAAAGGTTCAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGCAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACt                                                                                                                                                                                                                                             >  1:540026/1‑251 (MQ=255)
             gAAAGGTCATCACGAACGGTAATTTCGATGCCGAAAGGTTCAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCt                                                                                                                                                                                                                                <  2:239956/251‑1 (MQ=255)
             gAAAGGTCATCACGAACGGTAATTTCGATGCCGAAAGGTTCAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCt                                                                                                                                                                                                                                >  2:529259/1‑251 (MQ=255)
                aGGTCATCACGAACGGTAATTTCGATGCCGAAAGGTTCAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGcc                                                                                                                                                                                                                             >  2:249466/1‑251 (MQ=255)
                    catcaCGAACGGTAATTTCGATGCCGAAAGGTTCAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCcgcg                                                                                                                                                                                                                          >  1:237857/1‑250 (MQ=255)
                         cGAACGGTAATTTCGATGCTGAACGGTTCAGCGTGTTGTGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGGTAACAACGAGGCGGAAGAAATCTTCAGTAAATTATAAGCCGATGAGGTCCTCTATCACCCCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATc                                                                                                                                                                                                                    <  2:322388/251‑1 (MQ=255)
                           aaCGGTAATTTCGATGCCGAAAGGTTCAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATcga                                                                                                                                                                                                                  <  1:534652/251‑1 (MQ=255)
                                 aaTTGCGATGCCGAAAGGTGCAGCGTGTTGGGGAATCCAGGAGAGGTCTTTTGCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACTATGAGGTCATCTATTACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCATATAACGCAAAAACTCCCGGGTGCTGCTGCCGCGAAGATCGACGATg                                                                                                                                                                                                             <  2:519216/250‑1 (MQ=255)
                                  aTTTCGATGCCGAAAGGTTCAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGt                                                                                                                                                                                                           <  1:439262/251‑1 (MQ=255)
                                    ttCGATGCCGAAAGGTTCAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTc                                                                                                                                                                                                          >  1:554907/1‑250 (MQ=255)
                                      cGATGCCGAAAGGTTCAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCat                                                                                                                                                                                                        <  2:237857/250‑1 (MQ=255)
                                           ccGAAAGGTTCAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACTCCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGTTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGa                                                                                                                                                                                                  <  1:558693/251‑1 (MQ=255)
                                            cGAAAGGTTCAGCGTGTTGGGCAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGCGTTAACACCGAGGCGGAAGAAATCTTCAGTCAAGTAGTAGCCGATGAGGTCATCTATCACACCGCCAGAGGCATTCAAACTCCCCGGGTAAAGGGCTTTGCCGCTTTTGGTGCGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGCAGATCGACGATGGTCATATGTGa                                                                                                                                                                                                  >  2:384467/1‑250 (MQ=255)
                                              aaaGGTTCAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGacac                                                                                                                                                                                               >  1:426400/1‑251 (MQ=255)
                                               aaGGTTTAGCCTGTTGGGAACTCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGCGACGGAAGAACTCTTCAGCAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAGAGGGCTATGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCGGCCGCGACGATCGACGATGGTCATAAGTGacac                                                                                                                                                                                               >  2:561722/1‑250 (MQ=255)
                                                  ggtCAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCa                                                                                                                                                                                           <  2:520242/249‑1 (MQ=255)
                                                     cAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAAc                                                                                                                                                                                        <  1:529444/251‑1 (MQ=255)
                                                          gtttGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGATTTAACAACGAGGCGGAAGAAATCTGCAGTAAAGTAGGAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGCCACATCAAACATTcc                                                                                                                                                                                   <  2:464167/249‑1 (MQ=255)
                                                                gTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATc                                                                                                                                                                             >  1:120393/1‑251 (MQ=255)
                                                                 tAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGACGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCg                                                                                                                                                                            >  1:179518/1‑251 (MQ=255)
                                                                 tAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCg                                                                                                                                                                            >  1:561852/1‑251 (MQ=255)
                                                                     ccAGTAGAGGGCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGGCGATGGTCATATGTGACACATCAAACATTCCGGCATCGgtac                                                                                                                                                                        <  1:20945/251‑1 (MQ=255)
                                                                     ccAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGTTCATATGTGACACATCAAACATTCCGGCAGCGgta                                                                                                                                                                         <  1:124721/250‑1 (MQ=255)
                                                                     ccAGGAGAGGTCTTTGTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCTGCGGCCGCGAATATCGACGATGGGCAGATGGGACACATCAAACATTCCGGCATCGgtac                                                                                                                                                                        <  2:297334/251‑1 (MQ=255)
                                                                       aGGAGAGGTCTTTTTCGCGGGTGGCGGACTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGGAGACGATGAGGTCATCTATCACACCGCCAAAGGCATTCAACATCCCCGAGTAAAGGTCTTTGACGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATACCGCAAAAACTCCCGGGGGCGGCTGCCGCGAAGATCGACGATGGTCATACGTGACACATCACACATTCCGGCATCGgtacgt                                                                                                                                                                      >  2:58732/1‑251 (MQ=255)
                                                                          agagGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGGACGTAcc                                                                                                                                                                   <  2:373208/251‑1 (MQ=255)
                                                                              gTCTTGTTCGCGGGTGGCGGAGTTAACACCGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGCTAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAACCATTCCGGCATCGGTACGTACCGCat                                                                                                                                                               >  2:578622/1‑251 (MQ=255)
                                                                                      cgcgGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCTCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATAGGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTtc                                                                                                                                                        <  1:234346/250‑1 (MQ=255)
                                                                                      cgcgGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGCCACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTtcg                                                                                                                                                       >  2:437171/1‑251 (MQ=255)
                                                                                      cgcgGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTtc                                                                                                                                                        <  2:488688/250‑1 (MQ=255)
                                                                                         gggTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCTCATGATGTgcgtcg                                                                                                                                                    <  1:475393/251‑1 (MQ=255)
                                                                                             ggCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGAttt                                                                                                                                                <  1:66816/251‑1 (MQ=255)
                                                                                                      aacaacGAGGCGGAAGAAACCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCTCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCg                                                                                                                                        <  2:540026/250‑1 (MQ=255)
                                                                                                       acaacGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCTCACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGAGCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTa                                                                                                                                      <  1:293333/251‑1 (MQ=255)
                                                                                                          acGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCg                                                                                                                                        >  2:154212/1‑246 (MQ=255)
                                                                                                          acGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTGCGTCGATTTGCGAACCg                                                                                                                                        <  1:154212/246‑1 (MQ=255)
                                                                                                                cGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCgg                                                                                                                             >  2:487736/1‑251 (MQ=255)
                                                                                                                      aaaTCTTCAGTAAAGTAGTAGGCGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGcatcat                                                                                                                       <  2:426400/251‑1 (MQ=255)
                                                                                                                            tCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCa                                                                                                                    <  2:443790/248‑1 (MQ=255)
                                                                                                                            tCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGc                                                                                                                  <  2:108195/250‑1 (MQ=255)
                                                                                                                             cAGTAAAGTAGTAGACGATGAGGTCATCTATCACACAGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAACAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGCTGGACATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGTTTTACGACACGTAATGCAGCTGCATCATCCAGCCg                                                                                                                >  2:195/1‑251 (MQ=255)
                                                                                                                              aGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCCCATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGt                                                                                                               <  2:18396/251‑1 (MQ=255)
                                                                                                                               ctAAAGAAGTAGACGATGAGGACATCTATCACACCGCCAGAGGCATTCAACATCACCGCGTAAATGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATACCGCACCAACTCCCGGGGGCGGCTGCCGAGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTCCGTACCGCATATTGGTCGTCGCTTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTg                                                                                                              >  2:80950/2‑251 (MQ=255)
                                                                                                                                    gtagtaGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAAt                                                                                                         >  2:458970/1‑251 (MQ=255)
                                                                                                                                      agtagACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATc                                                                                                        <  2:140708/250‑1 (MQ=255)
                                                                                                                                       gtagACGATGAGGTCCTCTATCACACCGCCAGAGGCATTCAACATCCACAAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTAGCCAGCAGATAACGCAAACACTCCCGGGTGCGGATGCCGCGAAGATCGACGATGGTCATATTTGACAAATCAAACATTCCGGCATCGGTACGTCCCGCATGATGTTCGTCGTTTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGGGGAAATca                                                                                                       >  2:417345/1‑249 (MQ=255)
                                                                                                                                          gACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATccacca                                                                                                   <  1:372410/251‑1 (MQ=255)
                                                                                                                                          gACGATGAGGTCAACTATCACCCCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTGCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATccacca                                                                                                   <  2:725/251‑1 (MQ=255)
                                                                                                                                                     cATCTGTCACACCGCCAGAAGCATTCAGCATCCCCGAGTACCGGGCTTTCCCGCTCTTGATGAGCTTCGCCACATCGTTCGCCTGAAGCTCACGCCCCAACTCCCGGGTGCGGCTGCCGAGACGATCGACGACGGACATATGTGACACATCAAACATTCCGGCATCGGTACGTCCCGCATGCTGTTCGTCGCTTTGCGAACCGTCATGCAGCGGCATCATACAGCCGTGGAAATCACCCATGCGAGcgccg                                                                                        >  2:585134/1‑251 (MQ=255)
                                                                                                                                                          aTCACACCTCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGGACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCaaa                                                                                    <  1:81086/250‑1 (MQ=255)
                                                                                                                                                                  gCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGtgtt                                                                           >  1:509581/1‑251 (MQ=255)
                                                                                                                                                                   ccAGAGGCATTCAACATCCCCGAGTAAAGGGCTTGGCCGCTTTGGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACGCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGtgttg                                                                          <  1:578622/251‑1 (MQ=255)
                                                                                                                                                                   ccAGAGGCATTCAACAGCACCGAGTAAAGGGATTTGCCGATTTTGGGGAGCTTCGCCACATCGTTCGACAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGGCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATTGGTACGTACCGCATGATGTTCGGCGATGTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCTCCATGCGAGCGCCGCAAAGCGTGtgttg                                                                          <  1:307251/251‑1 (MQ=255)
                                                                                                                                                                      gagGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCAAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCACAGCGTGTGTTGTTc                                                                       >  2:330934/1‑251 (MQ=255)
                                                                                                                                                                         gCATTCAACAACCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACAGTCCTGCATCGGTACGTACCGCATGATGTTAGTCGATTTGCGAACCGTAATGCAGCGGCATCAGCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTa                                                                    <  2:117711/251‑1 (MQ=255)
                                                                                                                                                                              cAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACaaa                                                                <  1:487736/250‑1 (MQ=255)
                                                                                                                                                                                 cATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAg                                                            <  1:60752/251‑1 (MQ=255)
                                                                                                                                                                                    ccccGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACCTCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGATCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCt                                                         <  2:158464/251‑1 (MQ=255)
                                                                                                                                                                                     cccgagcgaaGGGCTTTGACGCTATTGGAGACCTCCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGCTCGACGCTGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAACGCGTGTGTTGTTCGTCCAAAGGAGTCtg                                                        >  2:511589/9‑251 (MQ=255)
                                                                                                                                                                                      ccGAGTAAATGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAAGCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCtgt                                                       <  2:482341/251‑1 (MQ=255)
                                                                                                                                                                                           tAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGc                                                  >  1:489628/1‑251 (MQ=255)
                                                                                                                                                                                                          cTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAATGAGTCTGTTGTGCCATCTTGTCATCAtt                                  >  2:329064/1‑251 (MQ=255)
                                                                                                                                                                                                                   aGCTTCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCg                         <  1:529259/251‑1 (MQ=255)
                                                                                                                                                                                                                      ttCGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGCAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCgggg                      >  2:545995/1‑251 (MQ=255)
                                                                                                                                                                                                                        cGCCACATCGTTCGCCAGCAGATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCt                    <  2:127971/251‑1 (MQ=255)
                                                                                                                                                                                                                           cacaTCGTTCGCCAGCAGACAACGCAACAACTCCCGGGTGCGGATGCCGCGCCGATAGACGATGGTCATATGTGACAAATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCATCGCTTTGCGAACCGAAATGCAGCGGCATCATCCAGCAGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGACATCTTGTCCTCATTGAATAAGCGGGGCTGAc                 >  2:588223/1‑251 (MQ=255)
                                                                                                                                                                                                                                cGTTCGCCAGCAGAAAACGGAAAAACCCCCGGGCGCGGCTGCTGCGAATATCGACGATGGTCACAGGTGACACATCAAACCTTCCGGCATCGGTACGTGACGCATGCTGTTCGTCGATTTGCGATCCGTAATGCAGCTGCATCATCCAGACGTGGAAATCCACCATGCGAGCGCCGCAAATCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCGTGGTCCCATTAAATAAGCGGGGCTGACAACt             <  2:333366/250‑1 (MQ=255)
                                                                                                                                                                                                                                       cagcagATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACAACTTTTTCATg     >  2:111324/1‑251 (MQ=255)
                                                                                                                                                                                                                                         gcagATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACAACTTTTTCATGGt   <  1:545995/251‑1 (MQ=255)
                                                                                                                                                                                                                                           agATAACGCAAAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACAACTTTTTCATGGTg  >  1:203462/1‑250 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                
CACGGCAATCATGGAAAGGTCATCACGAACGGTAATTTCGATGCCGAAAGGTTCAGCGTGTTGGGTAATCCAGGAGAGGTCTTTTTCGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACAACTTTTTCATGGTG  >  NC_000913/3050227‑3050711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: