| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,940,095 | C→T | M33I (ATG→ATA) | lpxM ← | Lipid A biosynthesis myristoyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,940,095 | 0 | C | T | 96.3% | 174.6 / NA | 54 | M33I (ATG→ATA) | lpxM | Lipid A biosynthesis myristoyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (25/27); minor base G (0/2); total (25/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
CGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTACCGGCTGCGAATGGATGTTAATTAATCAAACCGTAGCTGCGGCAC > NC_000913/1939851‑1940336 | cgcgcgGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCgct < 1:18685/251‑1 (MQ=255) tGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATAGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGcc > 2:47663/1‑251 (MQ=255) tctcCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTATGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGGGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCCAGGGACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTTCTACGCCCAGCCAt > 2:308840/1‑251 (MQ=255) tcCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCCGCCATGc > 1:171328/1‑251 (MQ=255) gcgTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGt < 2:287747/251‑1 (MQ=255) cgTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTa < 2:39775/251‑1 (MQ=255) gCCAACTCAGCCATCATTGCCATCGCTTGCGGCGAGGTGGCAAACATCTCACCAACAATCGCGTCGCGTTCAGCTTCACTGCGTTCTAGAAAGCAGAGCTACAGAGTGAGTAACGCACAACGGCGTGAGCTTTATCCCAGTCGTCGGGCAAAACGTCCGAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACGCGCGATCGCTGCTGCGCCCAGCCATGCTCCCCAATATCGCgg < 2:262567/251‑1 (MQ=255) aGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGaa < 1:246626/251‑1 (MQ=255) aGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGa > 2:401781/1‑250 (MQ=255) atTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGAttt < 2:165155/251‑1 (MQ=255) gCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCCCGACGGCGTGAGCTTTTGCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAACGCGGGTGTCGAAAGGATTTAt < 2:413064/250‑1 (MQ=255) cggcgCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGaa < 2:389795/251‑1 (MQ=255) ggcgCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAAt > 2:167753/1‑251 (MQ=255) gtggTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTa < 2:167285/249‑1 (MQ=255) gcgGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTa < 1:281944/251‑1 (MQ=255) gcgGTGGCAAACAGCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCGATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTa < 1:288386/251‑1 (MQ=255) gtcgcaacgatctcacaaacaaTCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGCGCGACAGATTGCTTACCGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGAAAAACGTCCCAGCCGTGCCAGAATGGGATCCCGGCACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCACATCCATGCTCCCCAGTAGCGCGGGAGCCGAAACGATTTATCACACCCAGGAATGTATTc > 2:373976/18‑251 (MQ=255) gTGGCAAACATCTCATCAACACTCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCCGGAATGTATTc > 1:302907/1‑251 (MQ=255) ggCAAACATCGCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTGCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGc < 2:413205/251‑1 (MQ=255) aTCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGACATCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGACCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACACGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAACGGATTTATCAACCTCAGGAATGTATTCGCTaatatt > 2:227194/1‑251 (MQ=255) agcGCTTCGCGTTCAGCTTCACTACGGTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTGTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGTCGAAAGGATTTATCAAACTCAGGAATGTATTCGTTATGATTTTTTTTCGTTTc < 2:333272/249‑1 (MQ=255) tctcgTTCAGCTTCACTACTTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCC‑AGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCt < 1:142683/247‑1 (MQ=255) gcgTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCttt > 1:180700/1‑251 (MQ=255) ttCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTcc > 1:406112/1‑251 (MQ=255) tCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGAATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTcc > 2:28199/1‑250 (MQ=255) ttCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTAtttttt > 2:584237/1‑226 (MQ=255) ttCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTAGCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTAtttttt < 1:584237/226‑1 (MQ=255) tCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACGCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGttt < 2:280239/249‑1 (MQ=255) aCGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATa < 2:160593/250‑1 (MQ=255) gTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAgg > 2:165715/1‑251 (MQ=255) gagCGACAGATTGCTTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCt > 2:235257/1‑251 (MQ=255) cAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCATAACGTCCCAGCCGTGCCAGAATGGGATCACGGCACTTTGCCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGACCAGCCATGCTCCCCAGTAGAGCGGGTGGCGAAAGGATTTATCAAACTCTGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTGGGATCAGTCAATAATCAATCTGGTGAt > 2:107101/1‑251 (MQ=255) aGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATa < 1:453445/251‑1 (MQ=255) ggCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCCTGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGc > 2:435162/1‑251 (MQ=255) ggCGTGAAGTTTTTCCCAGCCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACACGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGCTTTATCCAAATCAGGTATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCCAAAATCACTCTGGTGATAGTGTAGCGGCGCAACTTGc > 2:354497/1‑251 (MQ=255) gAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCg < 1:47663/250‑1 (MQ=255) cccAGGCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATGTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAAGCGGGTGATAGTGTATCGGCGCACCTTGCCCCGCACCAAATa < 2:248160/250‑1 (MQ=255) cGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCgg < 1:401781/251‑1 (MQ=255) cAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTac < 2:437476/251‑1 (MQ=255) aaCGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCATCAAATAAAAAAAGCCGGTactga < 1:165715/251‑1 (MQ=255) cGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGTATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATCGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTactgact > 2:571142/1‑251 (MQ=255) ccAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAg > 2:200294/1‑197 (MQ=255) ccGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCACACTCAGGCATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTACCg > 2:111391/1‑251 (MQ=255) aGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTACCGGCTGCg > 2:165932/1‑250 (MQ=255) aTGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTACCGGCTGCGAATg < 1:130482/251‑1 (MQ=255) gATCACGGACCTTTGGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTGCCCAGTAGCGCGGGTGGCGAAAGTATTGATCAAACTCAGTAATGTATTCGCTATTATTTGTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCACCTTGCCCCGCACCAAATAAAAAAAGCCGGTTCTGACTCCGTACCGGCTGCGAATGGATg < 2:135718/251‑1 (MQ=255) cACGGAACTTGTGCGGCGTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGTAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGTGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTACCGGCTGCGAATGGATGtta < 1:113104/251‑1 (MQ=255) aCTTTGGCTGCGTTAAAGCGATTCCCGCTATCTCTGCTACGCCCAGCCATGCTCCCCAGTATCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATGATTTTTTTTCGTTTCCATGCTTTTCCAGTTGCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTACCGTCTGCGAATGGATGTtaattaat < 2:517921/251‑1 (MQ=255) aCTTTGGCGTCGGTAATGCGATTCCCGCTCTCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAATGATTTATCAAACTCAGGAAAGTAGTCACTATTATTTTTGTTCGTTTCCATGCTTTGCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGGCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTACCGGCTGCGAATGGATGttaattctg < 2:155637/251‑4 (MQ=255) gcggcgTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTACCGGCTGCGAATGGATGTTAATTAATCCAAcc > 1:124367/1‑251 (MQ=255) cggcgTTAAAGCGATACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCACACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAAATTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTACCGGCTGCGAATGGATGTTATTTAATCAACCCg > 2:464285/1‑251 (MQ=255) gcgTTCAAGCGATACCCGCTCTCGCTGCTACGCCCAGACATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGCATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTCCTGACTGCGTACCGGCTGCGAATGGATGTTAATTCATCAAACCGt > 2:541276/1‑250 (MQ=255) aGCGATACCCGCTAGCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTACCGGCTGCGAATGGATGTTAATTAATCAAACCGTAGCTGCgg < 1:225213/251‑1 (MQ=255) aTACCCGCTATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGCATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGAACCACATAAAAAAAGCCGGTAATGACTGCGTACCGGCTGCGAATGGATGTTAATTAATCAAACCGTAGCTGCGGcac > 1:382843/1‑250 (MQ=255) | CGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCGTACCGGCTGCGAATGGATGTTAATTAATCAAACCGTAGCTGCGGCAC > NC_000913/1939851‑1940336 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |