Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,275,9570AG28.9% 61.2 / 11.0 38S163G (AGT→GGT) pdeCc‑di‑GMP phosphodiesterase PdeC
Reads supporting (aligned to +/- strand):  ref base A (3/24);  new base G (11/0);  total (14/24)
Fisher's exact test for biased strand distribution p-value = 3.02e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

ATATTAATGAATTGATCTATGCCCGTGATAACCATTTTTTATGCTCATCGCTGATAGCGCCTGTAAACGGCTATACGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCGCTG‑ATTCATTTGAAGGATTTAACCGTA‑CAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAACGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATT  >  NC_000913/4275745‑4276202
                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                            
atatTAATGAATTGATCTATGCCCGTGATAACCATTTTTTATGCTCATCGCTGATAGCGCCTGTAAACGGCTATACGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATgggg                                                                                                                                                                                                                       <  1:126024/250‑1 (MQ=255)
                    gCCCGTGATACCCATTTTTTATGCTCATCGCTGATAGCGCCTGTAAACGGCTATACGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑aa                                                                                                                                                                                                <  2:481098/251‑1 (MQ=255)
                               ccATTTTTTATGCTCATCGCTGATAGCGCCTGTAAACGGCTATACGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTtct                                                                                                                                                                                     <  1:399145/251‑1 (MQ=255)
                                  ttttttATGCTCATCGCTGATAGCGCCTGTAAACGGCTATACGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTTT‑CAACCCTCTCTTTTGGAGGGAAGTGATGGCT‑GATGACCCGACATTT‑CCATGGGGGGTGGATGCT‑ACGGTGAAG‑GAAACCCTTTTTTCGt                                                                                                                                                                                  >  2:27982/1‑251 (MQ=255)
                                             cATCGCTGATAGCGCCTGTAAACGGCTATACGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAag                                                                                                                                                                         <  1:437597/249‑1 (MQ=255)
                                                  cTGATAGCGCCTGTAAACGGCTATACGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTTT‑CAACCCCCTTTTTTGGGGAGGAGTTATGTTT‑GGTGGCCCCGCATTG‑CAATGGGGGGTGGTTTAG‑AAGGGGACA‑GAAACCTTTTTTTTGTTAAGCAAAAAGGcccc                                                                                                                                                                  >  2:467628/1‑249 (MQ=255)
                                                    gATAGCGCCTGTAAACGGCTATACGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCg                                                                                                                                                                 <  1:506645/250‑1 (MQ=255)
                                                            cTGTAAACGGCTATACGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGGGGGAAGGGATGGCT‑GATGACCCGAGAATG‑CAATGGGGTGTGTATGAA‑ACGGGGGCG‑AAAACATTTTTTTCGTTTAGCAAAAATGCCTCGgcaggca                                                                                                                                                          >  1:64087/1‑246 (MQ=255)
                                                                aaaCGGCTATACGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTAGCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCGCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGtttt                                                                                                                                                   <  1:24584/251‑1 (MQ=255)
                                                                     gCTATACGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAATCCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCg                                                                                                                                              <  2:91609/251‑1 (MQ=255)
                                                                          aCGATTGCACCGGCCGATTATAAGCGTGAACCTCACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTTT‑TAACCCCCTCTTTTTGAGTGGAGGGGTGTCT‑GATTAACCGCAATTT‑CAATGGGGGGTGTATGGT‑CAGGGGACG‑GAAACCCTTTTCTCGTTTAGCAAAAAGGGCTCGGCAGCAA‑CGTTTTTTCCGCttct                                                                                                                                         >  2:87963/1‑248 (MQ=255)
                                                                          aCGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGTTGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑CCGGTGACG‑AAAGCCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTACGCTG‑At                                                                                                                                        <  1:568274/251‑1 (MQ=255)
                                                                            gATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCGCTG‑ATTc                                                                                                                                      <  2:420211/251‑1 (MQ=255)
                                                                                gCACCGGTCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGATCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAATCCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCGCTG‑ATTCAttt                                                                                                                                  <  1:545091/251‑1 (MQ=255)
                                                                                    cGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTATTCAACCC‑CTCTTCTTGGGTGGAGTGATTTCTTGTTGACCC‑CCAATG‑CAATTGGGTGTGTATGTTTAGGGTGGCG‑AAAAA‑TTTTTCTTGCTAAGCAAAGAGGCCCAGGGAGCAA‑CAtttttgccccttgttcattttaat                                                                                                                               >  1:210957/1‑231 (MQ=255)
                                                                                    cGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCGCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCGCTG‑ATTCATTTGAAg                                                                                                                              <  2:499196/251‑1 (MQ=255)
                                                                                        cGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACACTCTCTTCTTGGGTGAAGTGTTGTAT‑GTTGACCCCACATTG‑CAATGGGGGGTGGTTTAT‑AAGGGGACGGAAAACATTTTT‑TTGTTTTGCAAAGAGGCCACCGCAGCAA‑CCTTTTTTTCGCTgttttctttgatgggtt                                                                                                                           >  1:543990/1‑235 (MQ=255)
                                                                                         gATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑TAACCCTCTCTTCTGGGGTGAAGTGATGTCT‑GATGACCCGACAATG‑CAATGGGGGGGGTATGAT‑ACGGTGACG‑AAAACCTTTTTTTCGTTTAGAAAAAAGGCCTCGGCAGCAA‑CGTTTTTTCCCCTG‑ATTTATTTTAAGGAttt                                                                                                                         >  1:142190/1‑251 (MQ=255)
                                                                                          aTTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCCCTTTTGGGGGGAAAGGATGTCT‑TATGACCCGACATTG‑CAATGGGGGGTGGATGAT‑AAGGAGACG‑AAAACCTTTTTCTTGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGGTTTCTCCCCTG‑GTTTATTTTGAGGAtttt                                                                                                                        >  1:438543/1‑250 (MQ=255)
                                                                                             ataAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGGGTGAAGGGATGTCT‑GATGACCCGGCCTTT‑CAATGGGGTGGGTATGAT‑ACGGTGACG‑GAAACCTTTTTTTTGTTTAGCAAAAAGGCCTCGGC‑GCAAACGCTTTTTCCGCTG‑ATTCATTTATATGATTTAAcc                                                                                                                     >  1:100093/1‑251 (MQ=255)
                                                                                                         cTAACGTTTCTATCTATTCTTACAGCGATACGACTTTTTTCTCTGGCTATAACATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTTT‑CAAAACTCTCTTCTTGGGGGACGTGATATTT‑GATGAACCGCGAATG‑CCCTGGGGGGTGGATAAT‑ACAGGGAGG‑AGAACCATTTTTTCGTTATGCAACAAGGCCCCGGCAGCAA‑AGTGTTTTCCACTG‑TTTCAttttgagggttttatcgaaaaaaaacat                                                                                                         >  2:464751/1‑226 (MQ=255)
                                                                                                                ttCTATCTATTATTACCGCGATACGTCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCTGCAA‑CGTTTTCTCCGCTG‑ATTCATTTGAAGGATGTAACCGGA‑CAAAGAAATGGCTAt                                                                                                  <  2:50881/250‑1 (MQ=255)
                                                                                                                    atctatTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCCCTCTTCTGGGGTGGAAAGAAGTCT‑GATGACCCGACATTGTAAATGGGG‑GTGGATGAT‑ACAGTGAAG‑AAAAACTTTTTTTTGTTTAGGAAAAAGGCCTGGGCAACAA‑AGGTTTCTTCTCTGGATT‑AATTGAAGGAATTTACCGTAACAAAGAAATggtttttttt                                                                                              >  1:5893/1‑243 (MQ=255)
                                                                                                                      ctatTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGGGGGGAATGGTGGTT‑TATTAACCGACATTT‑CAATTGGGTGTGGATGGT‑ACAGGGGCG‑AAAACCCTTTTCTCGTTTAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCCCTG‑ATTCATTTTAATGATTTAACAGTA‑CAAAAAAAAAGCTATTTttat                                                                                            >  1:156758/1‑250 (MQ=255)
                                                                                                                                  cgATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCGCTG‑ATTCATTTGAAGGATTTAACCGTA‑CAAAGAAATGGCTATTTATATGCGACAGTTTAtt                                                                               <  1:142584/251‑1 (MQ=255)
                                                                                                                                   gATACGCCTTTTGTCTCTTGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGGCATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTGTTCTCCGCGG‑ATTCAGTTGAAGGATTTAACCGTA‑TAAAGAAAGTGCTATTTATATGCGTCAGTTTATTc                                                                              <  2:563119/251‑1 (MQ=255)
                                                                                                                                      aCGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCGCTG‑ATTCATTTGAAGGATTTAACCGTA‑CAAAGAAATGGCTATTTATATGCGACAGTTTATTCGAc                                                                           <  2:438543/251‑1 (MQ=255)
                                                                                                                                                  tctGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCGCTG‑ATTCAtt                                                                                                                                   <  1:150864/184‑1 (MQ=255)
                                                                                                                                                         ataAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCGCTG‑ATTCATTTGAAGGATTTAACCGTA‑CAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAACGCCCAATTGCAg                                                          <  1:539661/249‑1 (MQ=255)
                                                                                                                                                         ataAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCGCTG‑ATTCATTTGAAGGATTTAACCGTA‑CAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAACGCCCAATTGCAGc                                                         <  1:87963/250‑1 (MQ=255)
                                                                                                                                                                 aCCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAATGAAGAGATGGCT‑GATTGCCCCACACTT‑CAATGGGGGGTGTATGAT‑ACGGGGACG‑CAAACCTTTTTCTCGTTAAGCAACGAAGCCTCGGCAGCAA‑AGTTTTTTCCACCG‑ATTCATTTAAAGGAATTAAACGTT‑CAAAGAAATGGCTATTTATATGCGACAGTATATTCGACCAAACGCCCCATTGCAGCCAttttttc                                                >  1:367922/1‑246 (MQ=255)
                                                                                                                                                                      tatGCAGCGGGGAAATTATGTGGCGGTTAT‑CCACCCTCTCTTCTGGGGTGAAGTGGTGGTT‑GATGACCCGCCATTT‑CAATGGGGGGTGTATGGT‑ACGGGGACG‑GAAAACTTTTTCTTGTTTAGCCAAAAGGGCTCGGCAGCAA‑CGTTTTTTCCGCTG‑ATTCATTTTAAGGGTTTAACCCTA‑CAAAGAAATGGCTATTTTTATGCGACAGTTTATTTGGCAAAACGCCCCATTTCAGCCATTTTTGCGACtt                                           >  1:149360/1‑251 (MQ=255)
                                                                                                                                                                             cGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCGCTG‑ATTCATTTGAAGGATTTAACCGTA‑CAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAACGCCCAATTGCAGCCATTGTTGCGACTTCATATCa                                    <  1:27982/251‑1 (MQ=255)
                                                                                                                                                                                      tATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCGCTG‑ATTCATTTGAAGGATTTAACCGTA‑CAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAACGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTta                            <  1:100870/250‑1 (MQ=255)
                                                                                                                                                                                           ggCGGTTAT‑CACCCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAATCCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCTGCAA‑CGTTTTCTCCGCTG‑ATTCATTTGAAGGATTTAACCGTA‑CAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAACGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAAccc                      <  2:309865/251‑1 (MQ=255)
                                                                                                                                                                                                         ccTCTCTTCTGGAGTGAATTGATGTCT‑GATGACCCGTCATTG‑CAATGGGGTGGGTATGAT‑ACGGTGACG‑AAACCCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGTAT‑CGTTTTCTCCGCTG‑ATTGATTTGAAGGATTTAACCTTA‑CAAAGAAATGGCTATGTATATTCGACAGTTTAGTCGACAAAACGCCCAATTTCTTCCTGGGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAatca         <  1:263829/251‑1 (MQ=255)
                                                                                                                                                                                                            ctctTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCGCTG‑ATTCATTTGAAGGATTTAACCGTA‑CAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAACGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAatcat        <  1:87381/249‑1 (MQ=255)
                                                                                                                                                                                                                   ggAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCGCTG‑ATTCATTTGAAGGATTTAACCGTA‑CAAAGAAATGGCTATTTATATGCGACAGTTTATGCGACAAAACGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTAtt  <  1:556291/248‑1 (MQ=255)
                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                            
ATATTAATGAATTGATCTATGCCCGTGATAACCATTTTTTATGCTCATCGCTGATAGCGCCTGTAAACGGCTATACGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTAT‑CAACCCTCTCTTCTGGAGTGAAGTGATGTCT‑GATGACCCGACATTG‑CAATGGGGTGTGTATGAT‑ACGGTGACG‑AAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAA‑CGTTTTCTCCGCTG‑ATTCATTTGAAGGATTTAACCGTA‑CAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAACGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATT  >  NC_000913/4275745‑4276202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑