| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,486,386 | 0 | G | A | 21.1% | 98.9 / 10.8 | 52 | A89A (GCG→GCA) | crp | DNA‑binding transcriptional dual regulator CRP |
| Reads supporting (aligned to +/- strand): ref base G (31/10); new base A (0/11); total (31/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.84e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGA > NC_000913/3486144‑3486634 | gACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGc < 2:226252/251‑1 (MQ=255) ctcGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGt > 1:222673/1‑251 (MQ=255) cGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTgg > 2:509449/1‑251 (MQ=255) tggttatcgcctacctGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTg > 1:455548/16‑250 (MQ=255) gTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGaa > 1:319078/1‑250 (MQ=255) tttttaaTTGCCACATTCATAAGTCCCCACCCAAGAGCCCGTTTATCCTCCAGGGTAAAAAGGCGAAAACGCTGTAGTACACCTTTAAAGTCTCTGGGGCTGTGCTGATCAAAGACGAAGAGTTTAAAGAAAGTACCCTCTCCTATCTGAATCAGGGTGTTGTTTTGGG‑CAATCGGGGCCGGTTTGAAGAGGGCCA‑GGACGGGACCG‑CAGGGGAACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTc < 1:351325/244‑1 (MQ=255) ccACATTCATAAGACCCCACCAAAGATCAGGCTTATCCACAAGGGTAAAAAAGCGAAACCTCGGTACAACATCTTAAAAGGCTTTGTGGCAGTGCTGATCAAAGCCAAAGAGGGAAAAGAAATGATCCTCTCCTATCGGAA‑CCGGGTTGTTTTTTTGGTCGATCGGGGCTTTTTTGAGGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAAt < 1:275635/251‑1 (MQ=255) cccccATCAAAGACCACGTTTATTCACCGGGGTGAAAAAGCGGAAACGCTGTACAACATCTATAAAGCCTTTGTGGCTGTGCTGATAAAAGAGGAAGGGGGTAAAAAAATGATCCTCTCCTTTCTGAATCAGGGTGTTTTTATGGT‑CGACCTGGGCCTGTTTGAAGAGGGCCA‑GGACCGTACCG‑CATGGGTCCGTGAAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGAt < 1:8227/249‑1 (MQ=255) cccATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGACGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAACTTTCGTACAACAAATTTCGCCAATTGATTc > 1:365929/1‑251 (MQ=255) gagCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGGGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAACTTTCGTACAAAAACTTTCGACACTTGATTCAGGTAAAcc > 2:17907/1‑251 (MQ=255) aagCACGCTTATTCCCCAGGGTGAAAAAGGGAAAACGGTGTCCGACATCGTTAAAGGCCCGGTGGCAGTGCGGACCAAAGACGAAGAGTGTAAAGAAATGACCCTCCCCAGTCTAAATCGGGGTGATTTTATTGG‑CGAACTGGCCTTGTTTGAAGAGGGCCA‑GGAAGGTAGCG‑CATGGGTTCTTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAAcc < 1:56926/250‑1 (MQ=255) ttATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACAtt > 1:260522/1‑251 (MQ=255) cAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACACGGACATTCTGATGCg > 1:459830/1‑251 (MQ=255) aaaaaaGCGGAAACGCTGTCCTACATCGTTAAAGGCTCTGTGGAAGTGCTGACAAAAGACGAAGAGGGAAAAGAAATGACCCCCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACGGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTc < 1:440494/250‑1 (MQ=255) aaggggAAACGTTGTCCTACATCGTTAAAGGCGCTGGGGCAGTGCTGAACAAAGACGAAGAGGGTAAAGAAATGATCCTCCCCTATCTGAATCAGGGTGTTTTTATTGG‑CGAACTGGGCTTGTTTAAAGAGGGCCA‑GAACCGTAGCG‑CAGGTGTCCGGGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGca < 1:530297/247‑1 (MQ=255) ggAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGAGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCAA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGcac > 2:79867/1‑248 (MQ=255) gCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCCGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGgcgc > 1:34356/1‑251 (MQ=255) acATCGATAAAGGCTCTTTGGCCGCGCTCATCTACGACGAAGAGGGTAAAGAAATGATCCTATCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCAA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGGAAACCCGGACATTCTGATGCGTTTGTCAGCACAGCTGGCGCGTCGTCTg > 2:112588/1‑251 (MQ=255) ggCAGTGCTGATCAAAGACGCAGAGGGTAAAGAAATGATCCTCTCCTATCTGCATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGACTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGaa > 1:216552/1‑249 (MQ=255) gCTGATAAAAGACGAAGAGGATAAAGAAATGATCCTCTCCTTTCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACTTAGCG‑CTTGGTTACTTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCa < 1:87191/251‑1 (MQ=255) acAAAGACGAAGAGGAAAAAAAAATGATCCTCTCTTAACTGAATAAGGGTATTTTTATTGG‑ATAATGGGGCCTGTGTGAAGAGGGCCA‑GGAACGTAGCG‑AAGGGGTCCGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTg < 2:335825/250‑1 (MQ=255) aaaGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCt > 1:297227/1‑218 (MQ=255) aaGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTAAGAGAAAGTGGGCAACCTGGCg > 1:481676/1‑251 (MQ=255) ggAAGAGGGTAAAGAAATGACCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTcc < 2:181411/250‑1 (MQ=255) gAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGCGAAAGTGGGCAACCTGGCGTTCCt > 2:517624/1‑251 (MQ=255) aaGAGGTTAAAGAAATGCTCCTCCCCTATTTGAATCCGGGGGATTTTATGGG‑CGACCTGGGCCGTTTTGAAG‑GGGCCAAGGAACGTAGCG‑CATGGGTCCGCGCAAATACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCGGCACAGATGGCGCGTCGGCTGCAAGTCACTTCAGATAAAGTGGTCAACCTGGCTTTCCTc < 2:401096/251‑1 (MQ=255) agGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGAc > 1:21575/1‑251 (MQ=255) gTAAAGAAATGATACTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGCACGTCGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGCACAAAAAATTTAGCCAATTGATTCCGGTAAACCCGGCCTTTCTGATGCGTTTGTCTGCCCCGATGGCGCGTCGTCTGCAAGTCCCTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGAAGTg > 2:574648/1‑251 (MQ=255) gAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACggg > 1:226051/1‑251 (MQ=255) aaTGATCCTCTCCTATCTGAATCAGGGTGCTTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGcc > 1:494699/1‑251 (MQ=255) aaTGATCCTCTCCTATCGGAATCAGGGTGTTTTTATTGG‑AGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGGGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGcc < 2:319078/251‑1 (MQ=255) tctcCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCACTTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGc > 1:507603/1‑250 (MQ=255) aTCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAgcct > 2:256100/1‑248 (MQ=255) tCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGActc > 1:271739/1‑251 (MQ=255) cggaataaggggtttttgaTTGG‑CGAACGGGGCCTGTTTGAAGAGGGCAA‑GGAACGTAGCG‑CAGGGGTACGGGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGActct < 1:509449/233‑1 (MQ=255) cAGGGTGATTTTATTGG‑CGACCTGGCCCTGTTGGAAGAGGGCCA‑GGAACGTGGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGa < 1:435782/250‑1 (MQ=255) ttgagtgggaaacggggCCTGTTTGAAGAGGGCCA‑GAAACTTAGCG‑AATGGTTACGGCCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAAGTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCaa < 1:256970/236‑1 (MQ=255) aTTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACaaaaa > 1:37978/1‑95 (MQ=255) aTTGG‑CGAACGGGGCTTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACTTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACaaaaa < 2:37978/95‑1 (MQ=255) ggCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGCAAACCGCCTGTGACGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTAt > 2:135510/1‑251 (MQ=255) ccgttttggAAGGGGGCGA‑GAAACGTAGCG‑CATGGGTATGTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATg < 2:222673/243‑1 (MQ=255) tGAAGGGGTCCA‑GGAACGT‑GCGGCAGGGGTCCGTGGAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAc < 1:126027/250‑1 (MQ=255) tGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCAcc > 1:344819/1‑251 (MQ=255) gaagacgcccA‑GGAACGTAGCG‑CATGGGCACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAACCAACCAGCCGCTATGCCTCAccc > 2:293918/9‑251 (MQ=255) aaGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCg > 1:436412/1‑251 (MQ=255) agGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGAc > 1:505187/1‑251 (MQ=255) gatagatcagggggactggCGAAAACCGACTGTGAAGTGGCTGAAATTTCGTACAAAAAAGTTCGCCAAGTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGGCACTTCAGAGAAAGTGGGCACCCTGGCGTTCCTCGACGGGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCCCCCGGACGGTATGCAAAt < 1:546457/233‑1 (MQ=255) aGCG‑CATGGGTACGGGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAAAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACACCCAAACGCTATGACTAACCCGGACGGTTTGCAAATCa > 2:376789/1‑250 (MQ=255) cg‑cATGGGTACGCGCGAAAACCGCCTGTGAAGTGGCTGAAATTTAGTACAAAAAATTTCGCCAATTGATTAAGGGAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTAGGACTCACCCGGACGGGATGCAAATCaaa > 2:543696/1‑250 (MQ=255) ggTACGTGCAAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTAccc < 1:321277/251‑1 (MQ=255) cGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCa < 1:104025/251‑1 (MQ=255) cGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAACTTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGa > 2:391418/1‑250 (MQ=255) | GACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGG‑CGAACTGGGCCTGTTTGAAGAGGGCCA‑GGAACGTAGCG‑CATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGA > NC_000913/3486144‑3486634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |