Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	402,391	Δ723 bp	coding (645‑1367/1416 nt)	phoA →	alkaline phosphatase

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	402391	403113	723	43 [0]	[1] 44	phoA	alkaline phosphatase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 402390	0 (0.000)	43 (0.760)	40/480	0.4	100%	coding (644/1416 nt)	phoA	alkaline phosphatase
	?	NC_000913	403114 =	0 (0.000)					coding (1368/1416 nt)	phoA	alkaline phosphatase

GCTGGAATTCGCTAAAAAGGAGGGTAACACGCTGGTCATAGTCACCGCTGATCACGCCCACGCCAGCCAGATTGTTGCGCCGGATACCAAAGCTCCGGGCCTCACCCAGGCGCTAAATACCAAAGATGGCGCAGTGATGGTGATGAGTTACGGGAACTCCGAAGAGGATTCACAAGAACATACCGGCAGTCAGTTGCGTATTGCGGCGTATGGCCCGCATGCCGCCAATGTTGTTGGACTGACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACTTTAACCC  >  NC_000913/402868‑403362                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                         cggtgtcaaaacctataacggcgcgctgggcgtcgatattcacgaaaaagatcacccaacgattctggaaatggcaaaagccgcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggccgaaaaggatcgattaccgaCCAGa                                                                                                                                                                                                                                                      <  2:62825‑M2/5‑1 (MQ=255)  ggtgtcaaaacctataacggcgcgctgggcgtcgatattcacgaaaaagatcacccaacgattctggaaatggcaaaagccgcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaattctacggtccgagcgctaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGAc                                                                                                                                                                                                                                                     <  1:526225‑M2/6‑1 (MQ=255)        aaaacctataacggcgcgctgggcgtcgatattcacgaaaaagatcccccaacgattctggaaatggcaaaagccgcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGAtct                                                                                                                                                                                                                                               <  1:409910‑M2/12‑1 (MQ=255)         aaacctataacggcgcgctgggcggcgatcttcacgaaaaagatcacccaacgcttctggcaatggcaaaagccgcaggtatggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaaagtccgggtaacgctatggaaaaaggcggaaaaggatcgattacagaCCAGACCGAtctc                                                                                                                                                                                                                                              >  2:588947‑M2/239‑251 (MQ=255)               ataacggcgcgctgggcgtcgatattcacgaaaaagatcacccaacgattctggaaatggcaaaagccgcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTac                                                                                                                                                                                                                                        >  1:315931‑M2/233‑251 (MQ=255)                    ggcgcgctgggcgtcgatattcacgcaaaagatcacccaacgattctggaaatggcaaaagccgcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacatcgcgcaactgctacggtccgaccgcgaccagtgaaaaatgtccgggtaacgctctggcaaaaggcggaaaaggatcgattacagaCCAGACCGATCTATTATACACCAt                                                                                                                                                                                                                                   >  2:26091‑M2/228‑251 (MQ=255)                    ggcgcgctgggcgtcgatattcacgaaaaagatcacccaacgattctggaaatggcaaaagccgcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaagtatcgattaccgaCCAGACCGATCTCTTCTACACCAt                                                                                                                                                                                                                                   <  2:358530‑M2/24‑1 (MQ=255)                         gctgggcgtcgatattcacgaaaaagatcacccaacgattctggaaatggcaaaagccgcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaacaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGaa                                                                                                                                                                                                                                >  2:404092‑M2/223‑249 (MQ=255)                           tgggcgtcgatattcacgaaaaagaccacccaacgattctggaaatggcaaaagccgcaggtctggcgaccggcaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaactgctacggtccgcgcgcgcccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGcc                                                                                                                                                                                                                            >  2:518801‑M2/221‑251 (MQ=255)                                  cgatattcacgaaaaagatcacccaacgattcgggaaatggcaaaagccgcaggtctggcgacctgtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTgg                                                                                                                                                                                                                     <  2:17541‑M2/38‑1 (MQ=255)                                     tattcacgaaaaagatcacccaacgattctggaaatggcaaaagccgcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGc                                                                                                                                                                                                                  >  1:29435‑M2/211‑251 (MQ=255)                                       ttcacgaaaaagatcacccaacgattctggaaatggcaaaagccgcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTg                                                                                                                                                                                                                >  1:533599‑M2/209‑251 (MQ=255)                                                        ccaacgattctggaaatggcaaaagccgcaggtctggcgaccggtaaggtttctaccgcagagttgcaggttgccccgcccgctgcgctgggggcacatgtgccctcgcgcaaatgctagggtccgagcgcgaccagggaaaaaggcccgggaaccgctctggaaaaaggcggaaaaggatcgattaccgaCCAGCCGGTTCTCTTCTACACCTTAAAAGCCGCTCTGGGGCTGAAATAAAACCGCCCCCg                                                                                                                                                                                               >  1:433939‑M2/192‑251 (MQ=255)                                                         caacgattctggaaatggcaaaagccgcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCgg                                                                                                                                                                                              >  1:133433‑M2/191‑251 (MQ=255)                                                                tcttgaaatggcaaaagccgcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGa                                                                                                                                                                                        <  1:34863‑M2/67‑1 (MQ=255)                                                                  tggaaatggcaaacgccgcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCCGTGAAtt                                                                                                                                                                                     >  2:307415‑M2/182‑251 (MQ=255)                                                                   ggaaatggcaaaagccgcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGaa                                                                                                                                                                                       <  1:129595‑M2/68‑1 (MQ=255)                                                                            caaagacgcaggtctggcgaccggtaacgtttctaccgcagagttgcaggctgccacgcccgctgcgctggtggcacatgtgacctcgcgcaactgctacggtccgagcgcgcccagtgaaaaatgtccgggtaacgctctggcaaaaggcggacaaggctcgcttaccgaCCAGACCGATCTCTTCTACACCATACAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGACTTTTCGCTGCCg                                                                                                                                                                           >  2:540342‑M2/172‑251 (MQ=255)                                                                               agccgcaggtctggcgaccggtaacgtttctaccgcagagttgcagcacgccccgcccgctgcgctggtggcacatatgacctcgcgcaactgctacggtccgagcgcgacccgcgaaaattgtcccggtgaagatctggaagaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCAGCTCTGGGGCTGAAATAAACCCGCGCCCGGCAGTGAATTTTCGCTGCcgggg                                                                                                                                                                        >  1:270806‑M2/169‑250 (MQ=255)                                                                                   gcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgctcgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGtt                                                                                                                                                                    <  2:410780‑M2/87‑1 (MQ=255)                                                                                   gcaggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGtt                                                                                                                                                                    >  1:582761‑M2/165‑251 (MQ=255)                                                                                     aggtctggcgaccggtaacgtttctaccgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGtttt                                                                                                                                                                  >  1:569063‑M2/163‑251 (MQ=255)                                                                                                       cgtttctaccgcagagttgcatgatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaaggtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCGTCTACACCATGAAAGCCGCTCGGGGGCTGAAATAAGGCCGCGCCTGGCAGTGAATGTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAg                                                                                                                                                <  2:587212‑M2/107‑1 (MQ=255)                                                                                                              accgcagagttgcaggatgccacgcccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATGAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTa                                                                                                                                           <  1:439818‑M2/112‑1 (MQ=255)                                                                                                                    gagttgcaggatgccacgcccgctgagctgggggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCTCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGAAGa                                                                                                                                   <  2:374182‑M2/120‑1 (MQ=255)                                                                                                                                      cccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGgcg                                                                                                                          >  1:228648‑M2/114‑242 (MQ=255)                                                                                                                                      cccgctgcgctggtggcacatgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGgcg                                                                                                                          <  2:228648‑M2/129‑1 (MQ=255)                                                                                                                                                       acatgtgacagcgcgcaaatgctatggtccgagcgcgaccagttaaaaatgtccgagtaacgctcgggaaaaaggcggaaaaggatcgatttccgtCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAACCCGCGCCCGGCAGTGAATTTTCGCTGCTGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCTCATACGCTCATGGTTAAAACATGAag                                                                                                <  2:542252‑M2/155‑1 (MQ=255)                                                                                                                                                          tgtgacctcgcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAgg                                                                                             >  1:112037‑M2/94‑251 (MQ=255)                                                                                                                                                           gtgacctcgcgcaaatgctacgggccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAgg                                                                                             <  2:299331‑M2/158‑1 (MQ=255)                                                                                                                                                                   gcgcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCt                                                                                    <  1:177819‑M2/167‑1 (MQ=255)                                                                                                                                                                     gcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaccgctctggaaaaaggcggaaaaggatcgcttaccgaCAAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGATGAACTAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCCGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGAGCTAt                                                                                  >  1:76781‑M2/83‑251 (MQ=255)                                                                                                                                                                     gcaaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACAATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGAATTAATGGCAGATCACGGGCGAATACGCTCATGGTTAAAACATGAAGAGGGATGGGGCTAt                                                                                  >  1:253264‑M2/83‑251 (MQ=255)                                                                                                                                                                      caaatgctacggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATg                                                                                 <  1:404092‑M2/170‑1 (MQ=255)                                                                                                                                                                           gctacggtccgtgcgcgaccagtaaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCGTCTGCTCTATGTAAGCCGCTCTGGGGCTTAAGTAAAACCGCGCCCTGCAGTGAATTGTCGCTGCCGGGTTGTTGTTTTGCTGTTAGCGACCAGGCTTAATGGCAGATCGCGGGGGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAAt                                                                            <  1:578859‑M2/175‑1 (MQ=255)                                                                                                                                                                              acggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATa                                                                           <  2:166032‑M2/176‑1 (MQ=255)                                                                                                                                                                              acggtccgagcgcgaccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAAGGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGATGGATGGTGCTatgaaaagaa                                                                          <  2:129057‑M2/177‑4 (MQ=255)                                                                                                                                                                                             ccagtgaaaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTATAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTCCCtt                                                          >  1:497114‑M2/59‑251 (MQ=255)                                                                                                                                                                                                    aaaatgtccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTc                                                   >  1:393472‑M2/52‑251 (MQ=255)                                                                                                                                                                                                           ccgggtaacgctctggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAATCCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATTGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTgg                                            <  1:49814‑M2/207‑1 (MQ=255)                                                                                                                                                                                                                         ggaaaaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAacc                                 <  1:260456‑M2/218‑1 (MQ=255)                                                                                                                                                                                                                             aaaggcggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAACCACCGTCg                          <  2:315931‑M2/225‑1 (MQ=255)                                                                                                                                                                                                                                  cggaaaaggatcgattaccgaCCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCGGTTAGCAACCAGACTTAATGACAGATCAAGGGCGAATACGCACATGGTTAAAACATGAAGAGGGATGGAGCTAGGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAACCACCGACGGCGCt                     >  2:114666‑M2/22‑251 (MQ=255)                                                                                                                                                                                                                                                     gaccAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACTTTAAccc  >  1:582331/1‑251 (MQ=255)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                         GCTGGAATTCGCTAAAAAGGAGGGTAACACGCTGGTCATAGTCACCGCTGATCACGCCCACGCCAGCCAGATTGTTGCGCCGGATACCAAAGCTCCGGGCCTCACCCAGGCGCTAAATACCAAAGATGGCGCAGTGATGGTGATGAGTTACGGGAACTCCGAAGAGGATTCACAAGAACATACCGGCAGTCAGTTGCGTATTGCGGCGTATGGCCCGCATGCCGCCAATGTTGTTGGACTGACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAAAACCGCGCCCGGCAGTGAATTTTCGCTGCCGGGTGGTTTTTTTGCTGTTAGCAACCAGACTTAATGGCAGATCACGGGCGCATACGCTCATGGTTAAAACATGAAGAGGGATGGTGCTATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACTTTAACCC  >  NC_000913/402868‑403362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑