| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,282,627 | C→T | Q922* (CAG→TAG) | narG → | nitrate reductase A subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,282,627 | 0 | C | T | 83.3% | 100.0 / 0.1 | 49 | Q922* (CAG→TAG) | narG | nitrate reductase A subunit alpha |
| Reads supporting (aligned to +/- strand): ref base C (8/0); new base T (13/27); total (22/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.39e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCATGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCAC > NC_000913/1282382‑1282870 | gCCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCATGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGAAAAAGGATTGCCAGGAACACCCagaac > 1:498916/1‑249 (MQ=255) ggTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCATGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGGAAAACCGCGCCACACATTATGGTCGTAGAGCGCGAGTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGa < 2:393255/251‑1 (MQ=255) aaGAAACCGACATCGTCACGCTGCCTATCCAGCATGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGCAAAGGGATTTCCTGGAACACCTAAAACGAGATGGaaacg > 1:291107/1‑247 (MQ=255) cGACATCGTCACGCTGCCTATCCAGCATGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAATGCGAGTGCGACCTGATCCCAGTTAAAACCGCGCCACACATTATTGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGACGGATAAAATCGGTAAGGGCGGTAAAGGGATTGCCTGGAACACCTAGCGCGAGATGGATCTGTTGCGTa < 2:585823/251‑1 (MQ=255) cGACATCGTCACGCTGCCTATCCAGCATGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGGTTGGCCGGAACACCCAGAGCGAGGTGGATCTGGTGCgg > 1:291401/1‑249 (MQ=255) gACATCGTCACGCTGCCTATCCAGCATGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCCGGAACCCCTAGAGCGGGATGGATatgcttccga > 1:436703/1‑245 (MQ=255) cTGCCTATCCAGCATGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGGAAAAGGATTGCCTTGAACACCCCGAGCGAGATGGATCTGCTTCGTCAGCTCAAATacac > 1:424038/1‑251 (MQ=255) tATCCAGCATGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAAAGCGAGGTGGAACTGCTGCGTAAGCCCCACTACAc‑ccaa > 1:299014/1‑247 (MQ=255) aTCCAGCATGACGCTGCCGCTGAACGGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGc < 2:118072/251‑1 (MQ=255) cATGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGAAAAGGGGATGCCTGGAACACCTAAAGCGGGGGGGATCTGCTGAGACAGCTCAAATAAAC‑CA‑AAGCGGCA‑gg > 1:497864/1‑251 (MQ=255) gcAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAACGGGGTTTCCTGGGACACCTCGAGCGAGAAGGGGCGGTTGCGGAAGCTCAACTACAC‑CA‑AAGCGGGA‑GGAACGGCGCAAGG‑CCAGCCGATgg > 2:19175/1‑250 (MQ=255) ccGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGaa < 1:469633/251‑1 (MQ=255) tgtgAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGa < 2:32922/213‑1 (MQ=255) tgtgAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGGTGGATCTGGTGCGGAAGCTCAACTACAC‑CA‑AAGCggg > 1:32922/1‑212 (MQ=255) ggAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCGTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGc < 1:578423/250‑1 (MQ=255) gAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCGCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGTA‑GTTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCag < 1:226942/251‑1 (MQ=255) aaaGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAAGGATTGCCTGGGAAACCTAAAACGGGATGGATCTGCTGGGGAAGCTCAACCA‑ACACA‑AAACGGGA‑GGGCCGGCGAAAGGGCCACCCG‑TG‑CTAAACACCGCCATTGATGCGGccaga > 1:219549/1‑245 (MQ=255) aaGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGGTTGCCTGGAACACCTAGAGCGAGATGGGTCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCCGCCGATG‑CTGGACACCGCAATTGATGCGGCAGAgatg > 1:249470/1‑251 (MQ=255) aGTGCGACCTGATCCAAGGTAAAACCGCGCCCCACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGACTGGAACACCCAGAGCGAGGGGGAGCTGCTGCGGAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGCAG‑CGGAAAAACACAATTTATGCGGCAGAgatgagcccg > 2:70104/1‑246 (MQ=255) gTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGa < 1:378581/251‑1 (MQ=255) gTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGa < 1:49680/251‑1 (MQ=255) gCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGac < 1:241629/250‑1 (MQ=255) cGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGacac < 1:14453/251‑1 (MQ=255) cccTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTg < 2:161908/250‑1 (MQ=255) ccAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGAATGCCTTGGACACCAAGGACGGGGAGGAACGGATGCGCTAGATCAACTACAC‑CC‑AAACGGAAAGGACCG‑CGCAAGG‑CCAGACGAAG‑GTGAAAACCGCAATTGATGCGGgagaagagagccttgcacgggccccggg > 2:322786/1‑227 (MQ=255) aaaaCCGCGCCACACATTATGCTCGTAGAGCGCGATTATCAGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGGAATGGCGGAAAAGGGGTTTCCTGGAACACCCCGAGAGAGATGGGTTTGGTGCGTAAGGTCAACAAAAC‑CCCAACAGGAA‑G‑ACCGGCGAAAGG‑CCAACCGATT‑CTGAACACCGCAAATAATGCGACAGAGATGGTACTGGCACAGG‑CACCGGGAACCa > 2:487306/1‑250 (MQ=255) aaCCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGGATGCCTGGGACACCTTGAGAGAGGTGGGTCTGCTGCGGAAGCCCCACTAAAC‑CA‑AAGCGGGA‑AGTCCGGCGACAGG‑GCAGCCGGTGGCT‑AACACCCCAATTGGTGCGGCCGGGAAGAACCTGAcaccgg‑caccggggaacac > 2:250944/1‑242 (MQ=255) gcgacacacaGTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGATAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGATCACCGCAATTGATGCGGCAGAGATGAGACTGACACTGG‑CACCGGAAACCAACGG‑TCa < 2:270753/247‑1 (MQ=255) cgcCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAAACAACGG‑TCAg < 2:251518/251‑1 (MQ=255) ccACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGt < 1:25564/251‑1 (MQ=255) tATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTg < 1:18741/250‑1 (MQ=255) tCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGGACACCCAGAGCGCGAAGGGTCTGCTGCGTAAACTCCACTACCC‑CA‑AAACGGGA‑GGGCCGGCGGAAGG‑CCAGCCCAAG‑CTGAACAAACCAATTGATGCTGGAGGGATGATCCTGCCCCTGGGCACGGGAAAcaaaggtccgggaagcggggaaagc > 2:262862/1‑227 (MQ=255) agcgATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGAGCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGac < 2:33837/202‑1 (MQ=255) ttATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACAACTAGAGCGGGATGGATCTGCTGCGTAAGCTCAACAACAC‑CA‑AAACGGAA‑GGTCCGGCGAAAGG‑CCAGCCGAAG‑CTGGAAACCGCCATTGGTGCGGCAGAGAAGGTCCTGACAACGG‑GACCCGAAACCAACGG‑TCAGGTAGCCGTGGAAGCCTGGGCTGccccgg > 1:134991/1‑248 (MQ=255) ggatacgtACGAACGCCTTCCCTCTATCTGGCCGCTGATGGAGAGAACCGGTAATGGCGGGAAAGTGAATGCCTGGAACACCTGGAGCGTGATTGATCTGCTCCGTGAGCGCAACTGCCC‑CT‑AATCTGAA‑GGTCCGGCGTAAGT‑CTTTCCGATG‑CTGATCTCCGCAATGGATGGGGCGCAGATGTTCCTAACACTGG‑CGCCGTAGACCAACGG‑TCAGTTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAAt < 1:547588/244‑1 (MQ=255) gACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAAGGATTGCCCGGAAAACCTAGAGAGAGAAGGGTCTTCTGCGTAAGCTCAACTACAC‑CC‑AAGCGGGA‑GGTACGGCGGAAGG‑GCAGCCGATG‑CCGAAAACCGCAAATGATGGGGCAGAGATGATCCTGGCACTGG‑CACCGGGAAACAACGGGCCGGGAAGCCG‑GAAAGCCTGGGCTGGCCTgggagcattt > 1:171501/1‑241 (MQ=255) ccTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTAc < 2:527351/250‑1 (MQ=255) aCGCTTGACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTg < 2:295719/251‑1 (MQ=255) aacggtccGCTGACGGAGAAAATCGGTTATGGCGGTAAAGGGCTGGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCTTAAGCTCAACTACTC‑CA‑ATGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAGCACCGTAATTGATGCGGCAGAGAGGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGTCCATACGCATCt < 1:194091/245‑1 (MQ=255) aTCGGCCCGTTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGAGCTGCTGCGTAAGCTCAACTACAC‑CA‑AATCGGAA‑GGTCCGGAGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACGGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATca < 2:199302/251‑2 (MQ=255) aTCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATc < 2:249470/250‑1 (MQ=255) ggCGGTAAAGGGATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAGACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATcc < 1:250944/250‑1 (MQ=255) gtgggaaaGGGATTGCCGGGAACACCTAGATCGAGATGGATCTGCGGCGTAAGCTTAACAACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCTATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCTTGAGCGAATTTACCGGACGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCga < 2:456402/246‑2 (MQ=255) gATTGCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGat > 1:386301/1‑250 (MQ=255) gCCTGGAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTc > 2:187981/1‑250 (MQ=255) gAACACCTAGATCGAGATGGATCTGCTGCTTAAGCTCAACTCCAC‑CA‑AATCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGcac < 2:286407/251‑1 (MQ=255) gAACACCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGATTCCGCGATATTCAGGcac > 2:354255/1‑251 (MQ=255) acacCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑ACGCGGAC‑GGTCCGGCGAAAGG‑CAAGCCGATG‑CTGAACACCGCCATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGcac > 1:279625/1‑249 (MQ=255) cacCTAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑TCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGAc < 1:388619/217‑1 (MQ=255) | GCCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCATGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACAC‑CA‑AAGCGGAA‑GGTCCGGCGAAAGG‑CCAGCCGATG‑CTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGG‑CACCGGAAACCAACGG‑TCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCAC > NC_000913/1282382‑1282870 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |