Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 358,484 | G→A | S69S (AGC→AGT) | cynR ← | DNA‑binding transcriptional dual regulator CynR |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 358,484 | 0 | G | A | 97.3% | 227.4 / ‑6.0 | 75 | S69S (AGC→AGT) | cynR | DNA‑binding transcriptional dual regulator CynR |
Reads supporting (aligned to +/- strand): ref base G (0/2); new base A (31/40); total (33/42) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.05e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01 |
AATGCACAGGCGCGAAGGCAATCCCAACGTCCAACTCGTCGCGGCAAAGCATATCCTCGATTTTCTCCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGGCTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCAACCTATAAGTAAATCCAATGGAACTCATC > NC_000913/358237‑358724 | aaTGCACAGGCGCGAAGGCAATCCCATCTGCCAACTCGCCGCGGCAAAGCATATCCTCGATTTTCGCCTGCGACATTTCCTGGAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTg < 1:496288/251‑1 (MQ=255) ggcaaaGGCGCGAAGGCAACCCCACCTTCCAACTCGTCGCGGCAAAGCATATCCTCGATTTTCCCCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGGCTGGc < 2:551457/246‑1 (MQ=255) cgcccagccgcgAAGGCAATCCCACCGTCCAACACTGCGCGGCAAAGCTTATCCTCGATTTTCTCCGGCGGCATTTCCTGTAGCGGGAGCGTGATCGTGGGATAGCGGGCAGAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGTTGACGGGGATACGCAGCGATCCTCTCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGc < 1:54046/243‑1 (MQ=255) acaGGCGCGAAGGCAATCCCAACGTCCAACTCGTCGCGGCAAAGCATATCCTCGATTTTCCCCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTa < 1:138891/251‑1 (MQ=255) aGGCGCGAAGGCAATCCCAACGTCCAACTCGTCGCGGCAAAGCATATCCTCGATTTTCTCCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACt > 1:186055/1‑251 (MQ=255) cgAAGGCAATCCCAACGTCCAACTCGTCGCGGCAAAGCATATCCTCGATTTTCTCCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGAGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGc > 1:457234/1‑251 (MQ=255) gAAGGCAATCCCAACGTCCAACTCGTCGCGGCAAGGCATATCCTCAATTTGCTCCTGCGACATTACCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCTTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGcc < 1:146861/251‑1 (MQ=255) aaGGCAATCCCAACGTCCAACTCGTCGCGGCCCAGCATATCCTCGATTTTCTCCTGCGACATTTCCTGTAGCTGGAGCGTGCTGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCCGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCCGTTCCTGTAACGCCCGACTGGCGTACTGTCGcc > 1:428472/1‑250 (MQ=255) gacAACGTCCAACTCGTCGCGGCAAAGCATATCCTCGATTTTCTCCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTtctc > 1:417995/3‑251 (MQ=255) cccAACGTCCAACTCGTCGCGGCAAAGCATATCCTCGATTTTCTCCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTtctc > 1:389821/1‑251 (MQ=255) aaCTCGTCGCGGCAAAGCATATCCTCGATTTTCTCCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGACATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACACGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGt > 1:523255/1‑251 (MQ=255) cAAAGCATATCCTCGATTTTCTCCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGt > 2:418387/1‑251 (MQ=255) aaaGCATATCCTCGTTTTTCTCCGGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAAACCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGtt < 1:532278/251‑1 (MQ=255) aaaGCATATCCTCGATTTTCTCCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGCCTTCTCCTGCATCAGTGGGACGAATCGtt > 2:429911/1‑251 (MQ=255) aaaGCATATCCTCGATTTTCCCCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGtt < 1:558923/251‑1 (MQ=255) acgCATATCCTCGATGTTCCCCTGCCACATTTCCTGTAGCGGGAGCGTGATTTGGGGTTAGCCCCCATATAAACCCGCTATTAAGGGGCCGGTAAAGTAGCTCGTAAAGGTTGGTGTGACGGCGATACGCAGCGATCCTCGCGTCAGACCGGCAACATCATGAATCGCCCGGTTTCCCGCCCCCAGTTCCTGTAACGCCGGACTGGCGTACGGTCGCCAGACTTCTCCTGCATCAGTGAGACGAAGCGTTc < 2:570022/249‑1 (MQ=255) ggCATATCCTCGATTTTCCCCTGCGACCTTCCCTGAAGCTGGAGCGGGATGCTGGGATAGCGCGAATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCg < 2:298866/250‑1 (MQ=255) ccTCGATTTTCTCCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGCAACGAATCGTTCGCCCGcc > 2:90836/1‑249 (MQ=255) cTCGCTTTTCTCCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTAc > 2:137376/1‑251 (MQ=255) gATTTTCTCCTGCGACATTTCCTGTAGCTGGCGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGt > 1:480736/1‑251 (MQ=255) gATTTTCTCCTGCGACATTTCCTGTAGATGGAGCGTGATGCTGGGATAGCGAGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAg > 2:509265/1‑208 (MQ=255) gATTTTCCCCTGCGACATTTCCTGTAGCTGGGGCGGGATGCGGGTATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAg < 1:509265/208‑1 (MQ=255) tcCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCacac > 2:539878/1‑246 (MQ=255) cccgCGACATTTCTTGTAGTTGGGGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACa < 2:539341/246‑1 (MQ=255) aTTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGcc > 1:42396/1‑251 (MQ=255) ccttgaGCTGGGGCGGGTTGCTGGGATATCGCGCATAGAAATCCGCCATTAAGGTGCGGAGAAAGTAGCGCGTAAAGGTGTGTGTGACGGCGATTCGCAGCGATCCTCGCGTCAGATCGGCATCATCATGAAGGTCCCGTTTTCGCGCCCCCAGTTCCTGTGACGCTCGACTGGGGTACTGGCGCCAGACTTCTCCTGCATCAGTGTGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTaaa < 1:268240/246‑1 (MQ=255) cTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTCAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCCGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAAc > 1:371713/1‑251 (MQ=255) aGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAActct < 1:255786/250‑1 (MQ=255) cTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGAGGCCGATAAAGTAGCTCGTAAAGGTGCGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCGCACAGATCCTGTAACGCCCGAATGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTAGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTctcct > 1:75770/1‑251 (MQ=255) tGGAGCGTGATGCGTGGTTAGGCCGCATAGAAGTCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTctcct < 2:445628/250‑1 (MQ=255) tGATGCTGGGATAGCGCGCATAGAACTCCGCCATTAAGGGGCCGCTAAAGTAGCTCGTAAAGGGGGGGGTGACGGCGATACGCAGCGATCATCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGGGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTgg > 2:206920/1‑251 (MQ=255) gATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTgg < 1:520311/250‑1 (MQ=255) ggATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATctg < 1:243838/251‑1 (MQ=255) gcATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGCGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGCATCGCACGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCCGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGCCGAATCTGCTGGGaa > 1:552415/1‑249 (MQ=255) gcATAGAAACCCGCCATTAAGGGGCCGATAAAGTAGTTCGTAAAGTTGTGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGGCAGTCGTCTCCTGCATCAGTGAGTCGAATCGTTCGCCCGCTACGGACAAACAGCGGCGCGCTGAAACTCGCGTCTAACTGGCGAATCTGCTGGGAAAg < 2:218214/251‑1 (MQ=255) aTAGAAATCCGCCATTAAGGGGCCGATAAAGTAACTCGTAAGGGTGGAGGTGACGGCGATACGCCGCGATCCTCGCGTCAGATCGGCCACATGATGAATAGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCACGTCTGGAGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCATAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAgcg > 2:580821/1‑251 (MQ=255) aGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAgcgc > 2:160308/1‑250 (MQ=255) aaaaTCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAg < 1:296001/250‑1 (MQ=255) aaTCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGt < 2:457478/251‑1 (MQ=255) aTCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGtt > 2:104227/1‑251 (MQ=255) cccGCCATTAAGGGGCCGATAAAGGAGCTCGTAAAGGTGGGGTTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACACCATAATTCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTg < 2:457234/250‑1 (MQ=255) cGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTggg > 1:343437/1‑251 (MQ=255) gCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGga < 1:90199/251‑1 (MQ=255) cATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGgaga < 1:530505/251‑1 (MQ=255) aTTAAGGGGCCGATAAAGTAGCTCGGAAAGGGGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGGCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCGAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGAc < 2:558734/251‑1 (MQ=255) gCCGATAAAGTAGCTCGTAAAGGTGGTGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTGCGCCCGCTACGGTGAAACATCGGCACGCCGAAACTCTCCTCTAACTTGCGAGTCGGCTGGGAAAGCGCAGGTTCGGAGACGTTCAACg < 2:552415/251‑1 (MQ=255) agtaaGTAGCTCGTAATGGTGTGGGTGCCGGTCCGACCCAACGATCCTCGCGTCCGATCGGCAACACAATGAATCGCCCGTTTACCCGCCCCCAGTTCTTGTAACGACCGGCTGGCGGACTGTCGCCAGGCTTCTCCTGCATGAGTGTGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTTTCCGCTAACTGGCGAATCTGCTGTGAAAGCGCAGGTTGGGAGTCGTGCAACGccct < 2:334764/248‑4 (MQ=255) tAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATAAGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCAAGTTACTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCATGCATCAGTGAGCCGAATCGTTAGCTTGATACGGTCAAACAGCGGCCCGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTg > 1:66982/1‑251 (MQ=255) cGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACg < 2:417995/249‑1 (MQ=255) gTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACgggg > 2:225283/1‑250 (MQ=255) gTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGt < 1:62414/251‑1 (MQ=255) aaaGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATAGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTg > 2:206656/1‑250 (MQ=255) ggggTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGcc > 1:153055/1‑251 (MQ=255) ggggTGACGGCGATACGCAGCGAGCCGCGCGTCAGACCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGcc < 2:314294/251‑1 (MQ=255) tGACGGCGATACGCAGCGATACTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGt > 2:419728/1‑251 (MQ=255) aTACGCAGCGTCCCGCGCGTCAGATTGGCAACAGCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTACCGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACCCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACGGGCGGCACGGGGTAAGCTGCCATGTTCAGCCAc < 2:428472/251‑1 (MQ=255) aCGCAGCGATCCGCGCGTCAGATCGGCAACATCATGAAGCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCGAACTGGCGAATCGGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACgg < 2:186055/251‑1 (MQ=255) aGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAg < 1:245789/251‑1 (MQ=255) cgTCAGATCGGAAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGCCGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTg > 2:224488/1‑250 (MQ=255) cAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTGGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGatat < 1:332829/251‑1 (MQ=255) cAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACGCTCCTCTAACTTGCGAATCTGCTGGGAAAGCTCAGGTTGTGAGACGTGCAACGCACTGGCGGCACGGGTGAATCTGCCATGTTCAGCCACGGCAAGAAAATACTTGATATGTCgagag < 1:392514/251‑1 (MQ=255) atGAACCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTc < 2:17628/251‑1 (MQ=255) tGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCg > 1:447109/1‑251 (MQ=255) aTCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCaa < 2:278247/251‑1 (MQ=255) aTCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCaa < 1:225283/251‑1 (MQ=255) cGCCCGTTTTCCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCAAcc < 2:28323/251‑1 (MQ=255) ccGTTTCCCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCAACCtat < 2:447109/251‑1 (MQ=255) gTTTACCCGCCCCCAGTTCCTGTAACGCCCGACTGGAGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACATGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCAACCtata > 2:372909/1‑250 (MQ=255) ttACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCTCTACTGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCAACCTATAAg < 2:367875/250‑1 (MQ=255) ttACCCGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCAACCtata > 2:215426/1‑248 (MQ=255) cccGCCCCCAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCAACCTATAAGTaa > 2:104959/1‑250 (MQ=255) cccGCCCCCAGTACCTATAACGCCCGACTGGCGTACTGCCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAAGCTGCTGGGAAAGCGCAGGTGGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTTATATGTCGAGAGAGCAATCGCAACCTATAAGTaaa < 2:82427/251‑1 (MQ=255) cAGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCAACCTATAAGTAAATCCAATgg < 1:137376/251‑1 (MQ=255) aGTTCCTGTAACGCCCGACTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCAACCTATAAGTAAATCCAATGGa < 1:368429/251‑1 (MQ=255) tAACGACCGCCTGACGTACTGTCAACAGACTTCTCCTGCATCAGTGAGACGCATCGTTCGCCCGCTACGGTCACACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGACTCTGCTGGGAAAGAGCAGGTTGGCAGACGTGCAACGCACTGGCGGCCCGGGCGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCACCCTATAAGTAAATCCAATGGAACtcatc > 2:575660/1‑250 (MQ=255) | AATGCACAGGCGCGAAGGCAATCCCAACGTCCAACTCGTCGCGGCAAAGCATATCCTCGATTTTCTCCTGCGACATTTCCTGTAGCTGGAGCGTGATGCTGGGATAGCGCGCATAGAAATCCGCCATTAAGGGGCCGATAAAGTAGCTCGTAAAGGTGGGGGTGACGGCGATACGCAGCGATCCTCGCGTCAGATCGGCAACATCATGAATCGCCCGTTTACCCGCCCCCAGTTCCTGTAACGCCCGGCTGGCGTACTGTCGCCAGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCAACCTATAAGTAAATCCAATGGAACTCATC > NC_000913/358237‑358724 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |