| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,332,310 | C→T | G321G (GGG→GGA) | basS ← | sensor histidine kinase BasS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,332,310 | 0 | C | T | 98.0% | 169.0 / ‑6.4 | 50 | G321G (GGG→GGA) | basS | sensor histidine kinase BasS |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (44/5); total (44/6) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAACCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCAATAACATCCGCAGCAGGGTTGCATCACCCTGAACGGTGATGTCGGCGGCGCTCTCT > NC_000913/4332064‑4332556 | cACTGAATCTCTGACGCGCATTCTCTCCTCCACGTTAACGGAGGATAGTGCAATGAAAAACCGTGTTTATGAAAGGTTAACTACCGTGTTCAGCGTTCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCGCGTGCTGATCTTTCTTCAGCCGTTCCCAGG‑CTCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAGCTGTGTAATGCGGCTG‑ACAATACTTAATCCCa < 1:554879/251‑1 (MQ=255) cTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAACACTGCCC‑GTGATGCAGCTGTGTAATGCGGCTG‑CCAATACTTAAtccc > 2:171789/1‑248 (MQ=255) tAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGCTCTTTCTTCAGCAGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGATTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGAcc > 1:413276/1‑251 (MQ=255) tAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAg < 1:171789/248‑1 (MQ=255) aaTCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTGTATGAAAGTTTAACTACCGTGGTCAGCGGGCTGGTGGTCAGCAGCGTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCATCCGTACCCAGG‑CCCGCGGGCCGGAAGTCTCTTGCCGGTGTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATATTTAATCTCAGAcc < 2:101325/250‑1 (MQ=255) gACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGAAATGAAAAACCGTGGTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGCCCGCAGCTTTCGTTATATGGGGTTTGCTACGTCCTGATCTGGCTTCAGCCGTACCCAGG‑CCCGCGTGTCGGAAGTCTCTTGCCGGTTTTGCAGTAAAAACGGCCC‑GTGCTGCAACTGTGTAATGCGG‑TGTACAATTGTTAATCCCAGACTAATccc < 2:367868/249‑1 (MQ=255) aCGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGcc > 2:523576/1‑251 (MQ=255) cgcgCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCa < 2:420095/251‑1 (MQ=255) cgcATACTCTCATCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCAt > 1:144249/1‑250 (MQ=255) tACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACgg > 1:558944/1‑251 (MQ=255) cAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATAc > 1:7391/1‑251 (MQ=255) gaggagAGTGCAATGAACACCCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGCGCTGGTGGTCAGCAGCTTTCTTTCTATCTGGTTTGCCACGTACTGATCTTTCTTCAGACGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGCTGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGc > 2:296400/1‑251 (MQ=255) cGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCAttt > 2:107706/1‑251 (MQ=255) cGTGTTGATGAAAGTTTAACTAACGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATCCTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCAttt > 2:257239/1‑251 (MQ=255) ttATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTActct > 2:105590/1‑251 (MQ=255) ttATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTActct > 1:313274/1‑251 (MQ=255) tATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACtctc > 2:407991/1‑251 (MQ=255) aaGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCtcatca > 1:353504/1‑250 (MQ=255) aactcccgtttacggcgggtgggtggtCAGCTGCTCTCTTTATATCTTGTTGCCCCCGTACTGTTCTTTCTCCCCCCG‑CCCCAGGGCCCGCGGGCCGGAATTCTCTTGC‑GGTTTTTGAAGAAAAACCGCCCTGTGATGCAACTGTGAAAGGCGGCTG‑AAAACACTTACCCCCAGACAAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCt < 1:498195/229‑1 (MQ=255) aCCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTcc > 1:230403/1‑251 (MQ=255) tgtTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGCCCTTc > 2:426600/1‑250 (MQ=255) gtTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCAAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACACTACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACACACGCTTTACTCAACTCCCCGCCTTTACTCTCATCAATACCTGGTCCTTCAt > 1:305738/1‑251 (MQ=255) aGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTc > 1:562687/1‑251 (MQ=255) gTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAAc > 2:432113/1‑251 (MQ=255) gtCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGAc > 1:21499/1‑251 (MQ=255) ctttctttATATCTGGTTTGCCACGTACTGATCTTTCTTCCGCCGTACCCAGG‑CCCGCGTGCCGGAAGACTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTccat > 1:447165/1‑249 (MQ=255) tttGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAAATGTGTAATGCGGCTG‑ACAATACTTACTCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCtt > 1:375385/1‑251 (MQ=255) ccACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGAc > 1:177983/1‑223 (MQ=255) cACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGATTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATc > 1:199387/1‑250 (MQ=255) cACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGACTCCTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGCTGCACCTGTATAATGAGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACATGGTCCATCATCTTCAACTGCCATGACCGCTCCGTCATCTTATTGCAGCTTAAta > 1:237872/1‑249 (MQ=255) cTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGt > 2:556342/1‑251 (MQ=255) cTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGt > 1:103216/1‑251 (MQ=255) tGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGATTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATACCGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTATTCATAATGtt > 2:217651/1‑251 (MQ=255) aGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCgg > 2:470973/1‑251 (MQ=255) cAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACg > 1:307549/1‑251 (MQ=255) ccGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATggg > 1:552368/1‑251 (MQ=255) gAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTAc > 2:182885/1‑251 (MQ=255) tctTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGtt > 1:388039/1‑251 (MQ=255) cGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCa > 1:239081/1‑250 (MQ=255) tGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAACCGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGCCCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCAATAACAt > 1:228405/1‑251 (MQ=255) cAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCAATAACATcc > 1:423108/1‑251 (MQ=255) ggAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCAATAACATCCgc > 1:140956/1‑251 (MQ=255) gTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCAATAACATCCGCAGCAGGGTTGCAt > 1:59548/1‑251 (MQ=255) gCAACTGTGTAATGAGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCAATAACATCCGCAGCAGGGTTGCATCAccc > 1:477910/1‑251 (MQ=255) cAACTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCAATAACATCCGCAGCAGGGTTGCATCACCCt > 1:586704/1‑251 (MQ=255) cTGTGTAATGCGGCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCAATAACATCCGCAGCAGGGTTGCATCACCCTGa > 1:297161/1‑250 (MQ=255) gCTG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCAATAACATCCGCAGCAGGGTTGCATCACCCTGAACGGTGATGTcgg > 1:171891/1‑251 (MQ=255) tG‑ACAATACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCAATAACATCCGCAGCAGGGTTGCATCACCCTGAACGGTGATGTcggcg > 1:202063/1‑251 (MQ=255) aTACTTACTCCCAGACCAATCCAGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCTACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCACTAACATCCGCAGCAGGGTTGCATCACCCTGAACGGCGATGTCGGCGGCGct > 2:62615/1‑251 (MQ=255) tACTTAATCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCAATAACATCCGCAGCAGGGTTGCATCACCCTGAACGGTGATGTCGGCGGCGctc > 1:216624/1‑251 (MQ=255) ttAATCCCAGACCAAGCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCTTCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCAATAACATCCGCAGCAGGGTTGCATCACCCTGACCGGTGATGTCGGCGGCGctctct > 2:254880/1‑251 (MQ=255) | CACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGATCTTTCTTCAGCCGTACCCAGG‑CCCGCGTGCCGGAAGTCTCTTGCCGGTTTTGCAGGAAAAACTGCCC‑GTGATGCAACTGTGTAATGCGGCTG‑ACAATACTTAACCCCAGACCAATCCCGCCATAACGGCTGTCCATACGTACAAACGCTTTACTCAACTCCCCGCATTTACTCTCATCAATACCTGGTCCTTCATCTTCAACTGCCATGACCGCTCCGTCATCTTCTTGCAGCTTAATCATAATGTTGCTGCCTTGCGGGCTGTAACGATGGGCGTTTTCTACCAGGTTTCGCAATAACATCCGCAGCAGGGTTGCATCACCCTGAACGGTGATGTCGGCGGCGCTCTCT > NC_000913/4332064‑4332556 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |