| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,781,049 | C→T | intergenic (+32/‑166) | lldD → / → trmL | L‑lactate dehydrogenase/tRNA (cytidine/uridine‑2'‑O)‑ribose methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,049 | 0 | C | T | 97.2% | 230.3 / NA | 74 | intergenic (+32/‑166) | lldD/trmL | L‑lactate dehydrogenase/tRNA (cytidine/uridine‑2'‑O)‑ribose methyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base T (43/27); minor base G (0/2); total (45/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCG > NC_000913/3780803‑3781281 | tACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGAGGGTGTAGCTCACCTGGTCAATATGATAGGAAAAGAGATGAAAGCGGGGATGACGCTGAATGGCGCGCAATAGATAAGCGAAATTACGCAAAATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGGCA‑TGGCTCCCATGGCG‑AAAGGGAATGCGGCCTAGTCGTTTGCGCCCCCTCACCCCAACCCTCTACCTc > 1:338513/1‑249 (MQ=255) aCTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAACAGAGATGAAAGTGGCGATGGCGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGCTTCGCTGGTGCAGGGGCTGGGTAAAAAGTTTCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑gg > 1:288723/1‑251 (MQ=255) ggTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGGGTCGCTAACCTGCTCAATCTGATCGAAAAAGCGATGAAAGGGGCGATGACGCTGACTGGCGCGAAAACGATTAGCGAAATTACGCAAGATTTGCTGGGGGAGGGGCTGGGTAAAGAGGTGCCTGCGG‑AACTGGGTCCCATGGCG‑AAAGGGGATTCGGCATAGTCGTTTGGGGCCCCTCACCCTTACCCTCTCCTTCA‑GGGGGAggg > 2:63396/1‑251 (MQ=255) gTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGGGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGGAAGTGGCGATGAAGCTGGCTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGGGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CAACGGCCCCCATGGCG‑GAAGGGAAAGCGGCATAGTAGTTTGCGCCCCCCCCCCCTAACCCTCTCCTTCC‑GGGGGAgggg > 2:450059/1‑251 (MQ=255) gTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGAcc < 2:337689/251‑1 (MQ=255) gTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGGGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAAATACGCAAGATTCGCTGGGGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CCCTGGCTCCCATGGCG‑GAAGGGAAAGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGAcc > 1:247234/1‑251 (MQ=255) tttCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGAGGAGCTAAACTGCTAAATCTGGTCGGAAAAGAGATGAAAGGGGCGATGACGCTGACTGGCGCGGAATCGATCAACGAAAATACGCAAGATTCGCCGGTGCAGGGGCTGGGGAAAGAGGTGCCTGCGG‑CACTGGCTCCCATGGCGGAAAGGGA‑TGCGGCATAGTCGGTTTCGGCCCCCCACCCCAACCCCCCCCTTCC‑GGGAGAGGGGGCCggtc > 2:165471/1‑248 (MQ=255) gTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCt < 2:414419/251‑1 (MQ=255) gTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCt < 1:447646/251‑1 (MQ=255) tATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAggg > 1:128939/1‑236 (MQ=255) tATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAggg < 2:128939/236‑1 (MQ=255) gcgcTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGTCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCTCCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCtgtat < 2:299432/251‑1 (MQ=255) cTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACATGCTAAATCTGGTCGCAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGGAATCGATTAGCGAAATTACGCAAGCTTCGCTGGTGAAGGGGCTGGGGAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGGCTGCGGCATAGTCGTTTGCGCCCCCTCCACCTAACCCTCTCCTTCA‑GGGAGAGGGGGACGTTCGGCGCtggatgt > 1:488778/1‑250 (MQ=255) cAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGGACTCCCTc < 1:470093/251‑1 (MQ=255) cAGCGGGCCAGGCGGGTGTAGCTAACCTGCCTCATCTGATCGAAAAAGCGGTGAAAGTGGCGATGAAGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCCAGATTCGCTGGGGCAGGGGCTGGGTAAAAAGTTGCCTGCGG‑CCCTGGCTCCCCTGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCCAACCCTCTCCTTCC‑GGGGGAGGGGACCCTTCGGCGCTGTTTGTACTccccc > 2:405093/1‑249 (MQ=255) aGCGGGCCAGGTGGGAGTAGCTAACCTGCTAAATCGGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGAGCAGCGAAATTTCGCAAGATTCGCTGGTGCAGGGGTTGGGTAAAGAGTTGCCTGCGT‑TATTGGCTCCCATGGCG‑AATGGGAATTCGGCAGAGTCGTTTGCGCCCCCTCACCCTAACCCGCGCCGTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCa < 1:339522/251‑1 (MQ=255) ggggCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTGGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGGCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCAct < 1:115239/250‑1 (MQ=255) cGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGTACCGTTCGGCGCTGTATGTACTCCCTCAct < 1:159089/251‑1 (MQ=255) cGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCAct < 1:251825/251‑1 (MQ=255) ggCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCActct < 2:338513/251‑1 (MQ=255) gCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGTGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGCGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTg > 1:480683/1‑251 (MQ=255) gCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACg < 1:468683/251‑1 (MQ=255) cGGGTGTAGCTAACCTGCTAACTCTGATCGAAAAAGAGATGAAAGTGGCGCTGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTACCCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑aaa > 2:269517/1‑248 (MQ=255) cGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑aaa < 1:269517/248‑1 (MQ=255) gggTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTAGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGAAAGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑ACAGGGAAAGCGGCATAGTCGGTTGCGCCCCCTCACACTCGCCCTCTCCATCA‑TGGAGAGGGGACCGATAAGCGCTGCATGTCTTACCTCAATCTG‑AAAcca > 2:330474/1‑248 (MQ=255) ggagtAGCTAACATGCTAAATCTGCTCGAAATAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATAGATCAGCGAAATTACGCAAGATTCGCTGGTGCCGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCATCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTACCTCACTCTG‑AAACGac > 2:468620/4‑250 (MQ=255) gtgtAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGacac < 1:545140/251‑1 (MQ=255) aGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCa < 1:241124/251‑1 (MQ=255) tAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCActc > 1:558038/1‑251 (MQ=255) aaCCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCActc < 1:405093/250‑1 (MQ=255) aCCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑g > 2:76366/1‑191 (MQ=255) aCCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑g < 1:76366/191‑1 (MQ=255) aCCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCtt < 1:408557/251‑1 (MQ=255) ccTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCttt < 1:508521/251‑1 (MQ=255) gCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACGCTG‑AAACGACACCGCACTCtttt < 2:31970/249‑1 (MQ=255) cTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCttttttt > 1:466863/1‑251 (MQ=255) aaaTCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTGACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTtc < 1:456310/250‑1 (MQ=255) gATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCt < 1:453804/249‑1 (MQ=255) gAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGcccc > 2:190909/1‑251 (MQ=255) aaaaaGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCt < 1:393793/251‑1 (MQ=255) aaaaaGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCt > 1:400326/1‑251 (MQ=255) aaGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCg < 2:177323/251‑1 (MQ=255) ggCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg > 2:26728/1‑251 (MQ=255) gATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggggg > 2:420866/1‑250 (MQ=255) gATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGCTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGCGAGGGCCggggg > 1:520094/1‑250 (MQ=255) tcgACGCCGACTGGGGCGAAATCGATCAGCGAAATTACGCAAGATTCGGTGGCGCAGGGGCTGGGTAAAGAGCTGCCTGCGG‑CACTGGCACCCATGCCG‑CACGGGAATGCGGCATAGCCGCTTGCGCCCCCTCACCCTAGCCCCCTCCTTCA‑GGGAGAGGGGACTGCTCGGCGCTGTATGTACTCCCTCACGTTG‑AACCGACAACGCATTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCGGGGGTg > 2:262911/3‑251 (MQ=255) gCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg > 1:414880/1‑249 (MQ=255) gCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCGCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:414880/249‑1 (MQ=255) gCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCC‑CCCCTTCAAGGGAGAGGGGCCGGTTCGCCCCTGTTTGTACTCCTTCACTTTG‑AAACGACACCGAACTCTTTTTTTCTCCCCCGCCCCTCCGGGGAGGGGGCCGGGGTgggggg > 1:527052/1‑251 (MQ=255) cgggCGGGAAAGCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAg < 2:505682/249‑1 (MQ=255) cGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTc > 1:352784/1‑251 (MQ=255) agATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCCCTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTc > 2:328829/2‑251 (MQ=255) aaTTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGTGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGAAACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGAACTGCTCACCAATTTTc > 1:438690/1‑251 (MQ=255) aaGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑g < 1:6323/113‑1 (MQ=255) aaGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑g > 2:6323/1‑113 (MQ=255) aGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt > 2:444177/1‑251 (MQ=255) ttCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑CAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCCATTTTCTGCTATCCTGcc > 2:443220/1‑251 (MQ=255) gCAGGGGCTGGGACAAGAATTGCATGCGG‑CAATGGCTCCCATGGAG‑AAAAGAAAAGCATCATAGTCGTTTGCGCCCCCTCACACTAACACGCTCCTTCA‑GGGAGAGGGGACCGTTAAACGCTGTATGTACTCCCTCACTATG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGCGAAGAGGGCCGGGGTGAGGGAAAAAGGCCGCACTACTCACCAAATTTCTGCTATCCTGCCCCCCCACt > 1:517779/1‑250 (MQ=255) ccggggCTGGGAAAAGAGTTGCCTTCGG‑CACTGGCTCCCATGGTG‑AAAGGGAATGCGGCATAGTCGTTTGAGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGCCCGTTCGGCGCTGTGTGCACTACCTCACTCTG‑AAAAGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGCGAGGGCCGGGGTGAGGGGAAAAGGCCGCCCGGCTCACCAATTTGCTGCCATCCTGCCCCCGCaata > 2:317765/3‑247 (MQ=255) gggTAAAGAGTTGCCGGCGG‑CCCGGGCCCCAAGGGCG‑AAAGGTAAGGCGGCAGAGTGTTTTGCGCCCCCCCCCCCTACCCCTCCCCGACG‑GGGAGGGGGGCCCGTGCGGCGTTGTATGTCCTCCCCCAC‑CTGGAAACGCCCCCGCACTTTTTTTTTCCCCCTCGCCCCCCCGGGGAGGGGGCGGGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAg < 2:400326/251‑1 (MQ=255) aaaGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATg > 1:408397/1‑251 (MQ=255) agagTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCt > 2:417125/1‑251 (MQ=255) ttGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCCGTATGCTAAAc > 2:66441/1‑251 (MQ=255) ggCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACg > 1:141015/1‑250 (MQ=255) cTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGCGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAc > 1:78049/1‑251 (MQ=255) tCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCAACCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGACGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAACCATCGTACTTTACGAAcc > 1:464771/1‑251 (MQ=255) aTGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGa > 2:445134/1‑250 (MQ=255) tGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGaa > 1:337350/1‑250 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTccc > 1:41250/1‑250 (MQ=255) cGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAATTACTg > 1:282737/1‑251 (MQ=255) gCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTCCTTTACGAACCAGAAATTCCGCCAAATACTGGc > 1:289687/1‑251 (MQ=255) ccccTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTccc > 1:239476/1‑96 (MQ=255) ccccTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACGCCCGCACTCTG‑AAACGACACCGCACTCCGTTGTTCTccc < 2:239476/96‑1 (MQ=255) cTCACCCTAACCCTCTCCTTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTgcg > 1:472377/1‑251 (MQ=255) | TACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGG‑CACTGGCTCCCATGGCG‑AAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCG > NC_000913/3780803‑3781281 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |