Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 3,388,041 | T→G | T50P (ACG→CCG) | aaeB ← | aromatic carboxylic acid efflux pump subunit AaeB |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,388,041 | 0 | T | G | 98.7% | 245.3 / NA | 79 | T50P (ACG→CCG) | aaeB | aromatic carboxylic acid efflux pump subunit AaeB |
Reads supporting (aligned to +/- strand): ref base T (1/0); new base G (35/43); total (36/43) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.56e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGTACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCATCGTGATTAACC‑AAACTCACGCAGGCGATGGGCCATTTTACGGAAGAACGAATCCT‑GGCTTTCGTCGCGATCTTGTTTGCCAGTGACCACCACTGTAGC > NC_000913/3387794‑3388286 | acaATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGAcc > 1:398812/1‑251 (MQ=255) caATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACcg > 1:375921/1‑251 (MQ=255) aTGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGTACcggc > 2:469787/1‑251 (MQ=255) cgGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATc > 1:437766/1‑251 (MQ=255) ggTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATcg < 1:262285/251‑1 (MQ=255) tataACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATcgcc > 1:494026/1‑251 (MQ=255) ataACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATcgccg < 1:138392/251‑1 (MQ=255) ggCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCTCACCAGAATCAGCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAAGACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCATCAATCGCCGCTGTCa < 2:45127/251‑1 (MQ=255) ccACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTGCCGccc < 2:104853/251‑1 (MQ=255) aCGCATACGAGTTTTCTATTCGTACCAGCGCGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGccc > 2:442337/1‑249 (MQ=255) cGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGc < 1:70326/251‑1 (MQ=255) agaCGAGTTTTCTATTCGTACCAGCGATGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAAGGTGCCGATGATGCGCAAAAAGCCGCGATAGCGAATAGCGCCAGAATACGGTTCACCGCCCGCAGCAAAGGCCGGACCGGCGGCAACAAAGGGCGCGTTCAGTACCGCACAGCGTg < 2:91131/249‑1 (MQ=255) gAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTg > 1:45835/1‑229 (MQ=255) gAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAAGCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCACCAATCGCCGCTg < 2:45835/229‑1 (MQ=255) tATTCGCACCCGCGAGGCCATCCCGGCACACAAACCGGCACAGCTAGCGCACACCAGCATCCTCAATAATGGTGCGCGGCTCATCGCCATGATGATCACCACTCCGGCAATACAGCCAATAAATGTGCCGATGCTGCGCAAAAAGCCACGCTAGCGAATAGCACCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACACTCGCCGCTGTCAGTACCGCCCAGCGAGGCGTTTcccgcc > 2:254639/1‑247 (MQ=255) cAGCGAGGATATCCAGGGACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGa > 1:71678/1‑250 (MQ=255) aGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGaaa < 2:326221/251‑1 (MQ=255) gCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGAAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAg < 1:303190/251‑1 (MQ=255) gATAGCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCcaac < 2:131793/251‑1 (MQ=255) atCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCcaacaa > 1:536200/1‑250 (MQ=255) aGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAgc > 1:347836/1‑251 (MQ=255) aGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGGGGCGTTTCCAGCTGGAAGTGATAGCCAACAAACAgc > 1:4160/1‑251 (MQ=255) ggTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTGGCCAGCTGGAAGTGAAAGcc < 2:515511/240‑1 (MQ=255) ggTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGGTTCCAGCTGGAAGTGAAAGcc > 1:515511/1‑240 (MQ=255) cAAAAACCGGCCCGGATACAGCACACCAGAATCCTCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGCAGTGAAAGCcaa > 2:84850/1‑238 (MQ=255) cAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACTGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCcaa < 1:84850/238‑1 (MQ=255) cAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAg < 1:499991/251‑1 (MQ=255) cGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTa < 1:340167/246‑1 (MQ=255) cGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATg > 1:84642/1‑251 (MQ=255) cGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGGACCGCCCCGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTa > 2:340167/1‑246 (MQ=255) ccAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCgg < 1:560144/251‑1 (MQ=255) ccAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCgg < 1:62652/251‑1 (MQ=255) cAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGt < 1:331333/251‑1 (MQ=255) cAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGt > 1:54895/1‑251 (MQ=255) aGATCCAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGGTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGTCGGTc < 2:91075/251‑1 (MQ=255) aGATACAGCACACCAGAATAATCAATAATGGTGCGCGGATCAGCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGAGAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTGCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTc < 2:375921/251‑1 (MQ=255) aCAGCACACCAGAACCATCAATAATGGTGCGCGGATCAGCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑a < 2:503959/251‑1 (MQ=255) cAGCACACCAGAATCAACAATAATGTTGCGCGGATCATGGCAATGATGAACTCCAGTCCGGCAATACTGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGGGAAAGCCAACAAACAGCGCCAGTACAATGGCGGACGCC‑Ag < 2:246523/251‑1 (MQ=255) cacCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGACGTGAAAGCCAACAAACAGCGCCAGTACAATGGCgggccgccgttttt > 2:170586/1‑239 (MQ=255) catcaATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAg < 1:391267/250‑1 (MQ=255) atcaATAATGGTGCGCGGATCATCGCAATGAGGATCACCAGTCCGGCAAAACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCg < 2:494026/251‑1 (MQ=255) aataatGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAat < 2:84642/251‑1 (MQ=255) aagggTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAGTACAGCCAATAAATGGGGCGATGATGCGCAAAAAGCCACGGTAGCGAATGGCGCCAGAAGACGGCGCACCTCCCGCACCAAAGGCCGGGCCGGCGTCAACAATCGCCGCTGTCAGTACCTCGCAGCGTGGCTTATCCAGCTGGAAGTGAAAGCCAACGAACAGCGCCAGGAGAATGGCGGGCGCC‑AGTTAGACGGCAAAGGGAatat < 2:255911/247‑1 (MQ=255) gcgGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGtt > 1:473126/1‑249 (MQ=255) ggATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑CGGTTTACCCCAAAACGAATATGTTGGTTAGc > 2:462179/1‑250 (MQ=255) acatcGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATg < 2:384362/250‑1 (MQ=255) atcGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGga < 1:107295/251‑1 (MQ=255) cGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAGGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGATTTACCGCCAAGCGAATATGTTGGTTAGCAATgg > 1:413943/1‑248 (MQ=255) cGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGgag < 2:145856/250‑1 (MQ=255) gCAATGCTGATCACCAATCAGGCAATACAGCCAATAAATGTGCCGATGTTGCGCCAAAAGCCACGATAGCGAATAGAGCCAGCATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCCGCGTGGCGGTTCCAGCTGGAAGTGAACGCAAACAAACAGCGCCAGTACAATGGCGGTCGCCCAGTTT‑AACGCAAAgaggcactgttgtgtttgcctggggg > 2:73020/1‑225 (MQ=255) aaTGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGCCGCC‑AGTTTTACCGCAAAGCGAATATGTTTGTTAGGAATGGGGaaa > 1:69603/1‑250 (MQ=255) atgatgAACACCAGTCTGGCACCATAGCCAATAAATGTGCCGATGCTGCGCAAAAAGGCACGATTGCGAAGAGCGCCAGAATAGGGTTAACCTCCTGCATCAAAGGCCGGTCCGTCGGCAGCAATCGCCGCTGTCAGTACCGCGCAGCGTTGCGATTCCAGCTGGAAGTGAAAGCCAACAAACAGCGTCAGTACAAGGGCGGTTGCC‑AGTTTCACCGCAAAGCGAATTTGTTGGTGAGCGATGGGGAAAAt < 2:52903/251‑1 (MQ=255) gatgatCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCTCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAACGCCAGTACAATGGCGGTCGGC‑AGGTTTACCGCAAAGCGAATATGTTGGTGAACAATGGAGAAAATAc > 1:330243/1‑251 (MQ=255) gatgatCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATCGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTAAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGGC‑AGGTTTACCGCCAAGCGAATATGTTTGTTAACAATGGGGAAAATAc > 1:481808/1‑251 (MQ=255) atgatCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGGAAATAcc > 1:130024/1‑251 (MQ=255) cAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCTCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCATCGTGa < 2:264847/251‑1 (MQ=255) cGGCAATACAGCCAATAAATGGGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCGCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCATCGTGATTAAc < 2:455800/251‑1 (MQ=255) aGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCAGCGTGATTAACC‑AAACTCAc < 1:462179/251‑1 (MQ=255) ccAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAACGAATATGTTGGTTAGCAATGGAGAAAATACCCCTCGTGATTAACC‑AAACTCAcac > 1:281985/1‑249 (MQ=255) gcgcAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATTCCCATCGTGATTAACC‑AAACTCACGCAGGCGATGGGCCATTTTACg < 1:26555/251‑1 (MQ=255) gcgcAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCATCGTGATTAACC‑AAACTCACGCAGGCGATGGGCCATTTTAc < 2:186034/250‑1 (MQ=255) aGCCACGATAGCTAATAGCGCCAGAATACGGTTCACCTCCCTCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCATCGTGATTAACC‑aaa < 2:477554/216‑1 (MQ=255) gCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑CGTTTTACCGCCAAACGAATATGTTGGTTAGCAATGGGGAAAATACCCATCGTGATTAACC‑AAACTCACGCAGGCGATGGGCCATTTTACGGAAGAACg > 2:9684/1‑250 (MQ=255) cACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCCGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCCAAACGAATATGTTGGTTAGCAATGGAGGAAATACCCCTCGTGATTTAAC‑ACAATCAACCAGGCCATGGGCCATTTTACGgaagaaacaat > 2:223946/1‑246 (MQ=255) cGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCCAAACGGAGATGTTGGTTAGCCATGGAGAAAATACCCATCGTGGTTAACCCAAAC‑CCCCCCGGCGATGGGCCCTTTTTCGGGCAAACGAATcc > 2:22654/1‑251 (MQ=255) aTAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCATCGTGATTAACC‑AAACTCACGCAGGCGATGGGCCATTTTACGGAAGAACGAATCCT‑g < 2:316498/251‑1 (MQ=255) aGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCATCGTGATTAACC‑AAACTCACGCAGGCGATGGGCCATTTTACGGAAGAACGAATCCT‑GGCTTtcgtc < 1:442070/251‑1 (MQ=255) ttCACCTCCCGCCGCACAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTCCCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑CGTTTTTACGCCAAGCGAATTTGTTGGGTAGCAATGGAGAAAATACCCATCGTGATTAACC‑AAACTCACGCAGGCGCTGGGCCATTTTTCGGAAGAAAGAATCCT‑GGCTTTCGTCGCGATCTTGTTTGcc > 2:577703/1‑251 (MQ=255) aCCTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGGTTTTCCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCATCGTGATTAACC‑AAACTCACGCAGGCGATGGGCCATTTTACGGGAGAACGGATCCT‑GGCTTTCGTCGCGATCTTGTTTGcccgt > 1:62943/1‑248 (MQ=255) cTCCCGCAGCAAAGGCCGGACCGGCGGCAACAATCGACGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAAAAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGGTGGTTAGCAATGGAGAAAATACCCATCGTGTTTAACC‑CAACTCACGCATGCGATGGGCCATTTTACGGAAGAACGAATCCT‑GGCTTTCGTCGCGATCTTGTTTGGCAGta > 2:42664/1‑249 (MQ=255) cccGCAGCAAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGGTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCATCGGGATTAACC‑AAACTCTCGCATGCGATGGGCCATTTGACGGAAGAACGAATCCT‑GGCGTTCGTCGCGAGCTTGTTTGCCAGTGa < 2:59153/249‑1 (MQ=255) gcagcaAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCATCGTGATTAACC‑AAACTCACGCAGGCGATGGGCCATTTTACGGAAGAACGAATCCT‑GGCTTTCGTCGCGATCTTGTTTGCCAGTGaccacc < 2:536200/251‑1 (MQ=255) gcaAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCATCGTGATTAACC‑AAACTCACGCAGGCGATGGGCCATTTTACGGAAGAACGAATCCT‑GGCTTTCGTCGCGATCTTGTTTGCCAGTGACCACCACt < 1:502216/251‑1 (MQ=255) gcaAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCATCGTGATTAACC‑AAACTCACGCAGGCGATGGGCCATTTTACGGAAGAACGAATCCT‑GGCTTTCGTCGCGATCTTGTTTGCCAGTGACCACCACt < 1:441211/251‑1 (MQ=255) gcaAAGGCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCAGCGTGATTAACC‑AAACTCACGCAGGCGATGGGCCATTTTACGgaag < 1:585071/203‑1 (MQ=255) gcaAAGGCCGGACCGGCGGCAACAAGCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATTCCCATCGTGATTAACC‑AAACTCACGCAGGCGATGGGCCATTTTACGGAAGAACGAATCCT‑GGCTTTCGTCGCGATCTTGTTTGCCAGGGACCACCACt < 2:398812/251‑1 (MQ=255) ggCCGGACCGGCGGCAACCATCGCCGCTGTCAGTACCGCCCCGCGGGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑CGATTTACCGCCAAGCGAATATGTTGGAATTCCATGGGGAAAAAAACCATCCTGATTAACC‑AAACTCACGCAGTCGATGGGCACTTTTATGGAAGAACGAATCATCGCCTTTCG‑CGCGATCTTATTTGCCAGGTACCACCACttgagc > 2:255773/1‑246 (MQ=255) ggCCGGACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCATCGTGATTAACC‑AAACTCACGCAGGCGATGGGCCATTTTACGGAAGAACGAATCCT‑GGCTTTCGTCGCGATCTTGTTTGCCAGTGACCACCACTGTAGc > 1:399172/1‑251 (MQ=255) gCCGGACCGGCGGCACCAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGCTTTACCGCCAAGCGAATATGTTGGTTAGCAAAGGAGAAAATAACCCTCGTGATTAACC‑AAACTCCAGCCGGCGGTGGGCCATTTTAAGGAAGAACGAATACT‑GGCTTTCGTCGCGATCTTTTTTTCCAATGACCACCACtcgg > 2:344149/1‑245 (MQ=255) | ACAATGATCAGCGCGGTATAACCGGCCAGCCCCCACGCATACGAGTTTTCTATTCGTACCAGCGAGGATATCCAGGTACAAAAACCGGCCCAGATACAGCACACCAGAATCATCAATAATGGTGCGCGGATCATCGCAATGATGATCACCAGTCCGGCAATACAGCCAATAAATGTGCCGATGATGCGCAAAAAGCCACGATAGCGAATAGCGCCAGAATACGGTTCACCTCCCGCAGCAAAGGCCGTACCGGCGGCAACAATCGCCGCTGTCAGTACCGCCCAGCGTGGCGTTTCCAGCTGGAAGTGAAAGCCAACAAACAGCGCCAGTACAATGGCGGTCGCC‑AGTTTTACCGCAAAGCGAATATGTTGGTTAGCAATGGAGAAAATACCCATCGTGATTAACC‑AAACTCACGCAGGCGATGGGCCATTTTACGGAAGAACGAATCCT‑GGCTTTCGTCGCGATCTTGTTTGCCAGTGACCACCACTGTAGC > NC_000913/3387794‑3388286 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |