Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,046,506 G→T V523V (GTG→GTT yeeJ → inverse autotransporter adhesin

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,046,5060GT96.1% 160.5 / NA 51V523V (GTG→GTTyeeJinverse autotransporter adhesin
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base T (34/15);  total (34/17)
Fisher's exact test for biased strand distribution p-value = 1.07e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTGGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAATGGTGACGGAAGCTATACCCAGATCCTGACCACAGGAGCGATGT  >  NC_000913/2046264‑2046747
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                   
tCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGCAAGGCTATAACGTCGAAGCCACCGCACTGGCAGCTGCAGGTGGCAAAGTGGTCACAACGGGTAAAGATATTATGGTTAACCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTc                                                                                                                                                                                                                                              >  1:376764/1‑250 (MQ=255)
            aaaTCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCt                                                                                                                                                                                                                                 >  1:484232/1‑251 (MQ=255)
              aTCACTGGTTCCTTCGCTAAAAACCAAAGATGCCCTGAAAGGCTATAACGTCGAAGCCACCTCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATGCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCGGGCCGAGTGAATTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTaa                                                                                                                                                                                                                               <  2:42394/251‑1 (MQ=255)
                   tGGTTTCGTCGCTACACACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGACGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGcc                                                                                                                                                                                                                            >  1:425076/1‑249 (MQ=255)
                   tGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGcc                                                                                                                                                                                                                            >  2:277219/1‑249 (MQ=255)
                      tttCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGaa                                                                                                                                                                                                                        >  1:531847/1‑250 (MQ=255)
                        tcgtcgCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAg                                                                                                                                                                                                                     <  2:117883/250‑1 (MQ=255)
                         cgtcgCTACACACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGaa                                                                                                                                                                                                                        >  2:270762/1‑247 (MQ=255)
                         cgtcgCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGa                                                                                                                                                                                                                    <  1:456702/250‑1 (MQ=255)
                           acgccgcccttccgatctGCCCGGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTc                                                                                                                                                                                                                 <  2:431360/234‑1 (MQ=255)
                               aaCAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACGCCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTGGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCg                                                                                                                                                                                                             <  2:376764/250‑1 (MQ=255)
                                   aaCCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTCCGCTAAGCCAGAAAGATTCCTCGGTAt                                                                                                                                                                                                         >  2:355291/1‑251 (MQ=255)
                                    aCCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATc                                                                                                                                                                                                        >  1:376882/1‑251 (MQ=255)
                                       aaaTAAGCCCTGAAAGGCTATCACGTAGACGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCAGCCGGCTTACCGGATAACCAGTACGCCAGAAACCGATAACACCTGGCCGCTTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCCTGGCTGTCGTTCAGGAACCTACGCTAAGCCCGAAAGATTCCTCGGTATCGtt                                                                                                                                                                                                     >  1:101088/1‑251 (MQ=255)
                                        aaTATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGGCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGGCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTa                                                                                                                                                                                                    <  2:522922/251‑1 (MQ=255)
                                        aaTATGCCCTGAAAGGCTATAACGTCGAAGCCACCGAACTGAAAACTGCCGGTGTCAAAGTGGTCACAACGGTTAAAGATATTCTGGTTACCCTGCCGACTTACCGGATCACCAGAACGCCAAAAACCGATAACACCTGGACGATTGAAGACACCGCCGAAGATGTCAAAGGCAATTTGTCGAATAGTGAAAAGAACATGGTTGTCGTTCAGACACCTACGCTAAGCCAGAAAGATTCCTCGGAATCGtt                                                                                                                                                                                                     >  1:246074/1‑250 (MQ=255)
                                             gCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTc                                                                                                                                                                                                                 >  1:431360/1‑233 (MQ=255)
                                                                   aaGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTa                                                                                                                                                                                                <  2:172793/228‑1 (MQ=255)
                                                                   aaGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTa                                                                                                                                                                                                >  1:172793/1‑228 (MQ=255)
                                                                            cACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAAcc                                                                                                                                                                <  1:277219/251‑1 (MQ=255)
                                                                                       gCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGAc                                                                                                                                                     >  1:17140/1‑251 (MQ=255)
                                                                                         cGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACtt                                                                                                                                                   >  2:483743/1‑251 (MQ=255)
                                                                                          ggTGGAAAAATGGTCACAACGAGCAAAGATATTCTGGTTAACCTGCCGGCTTACCGGTTAACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCACCGAAGATGTCAAAGGCAATTTGACGAATCGTGCACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGCAAGATTACTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCACATTCAACCGCCACACTGACttt                                                                                                                                                  >  2:576567/1‑251 (MQ=255)
                                                                                                     ggTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATACCACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCatg                                                                                                                                       >  2:189659/1‑251 (MQ=255)
                                                                                                         acaACGGGTAAAGATATTCTGGTTACCCTGCCGGATTACCGGTTCACCAGTACGCCAGAAACCGATAACCCCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGCTTCACATTCAACCGCCACACTGACTTTTCTTGCGCATGATgc                                                                                                                                   >  2:554453/1‑251 (MQ=255)
                                                                                                          caACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATgc                                                                                                                                   >  2:8124/1‑250 (MQ=255)
                                                                                                           aaCGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATgc                                                                                                                                   >  1:13331/1‑249 (MQ=255)
                                                                                                               ggTAAAGAAATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGAACTTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACATACGCTAAGCCAGAAAGATTCCTCGGAATCGTTAAGTACCCAAACATTGAACGCGGATTACCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAgg                                                                                                                             >  1:416766/1‑251 (MQ=255)
                                                                                                                           cTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCtgttgt                                                                                                                 >  1:137991/1‑251 (MQ=255)
                                                                                                                                   ccTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTgg                                                                                                         >  1:511921/1‑251 (MQ=255)
                                                                                                                                            ttACCTGTTCACCGGTACGCCCGAAAACGATATCACCTGACCGATTGAAGTCACCGCCGAAGATGTCCAAGGCAATTTATCGGATCGTGAACAGCGCAAGGTTGTCGTTCAGGCACCTACGCTTAGCCAGAAAGATTCCTCGGTATCGTTAAGTCCCCAAACATTAACCGCTGATTCCCATTCAACCGCCACCCTGACTTTTATTGCGCATGATGCAGCAGGTAATCATGTTGTCGGGCTGGTGCTCTCgc                                                                                                >  2:245110/1‑250 (MQ=255)
                                                                                                                                                              cccAGAAACCGATAACCCCTGGCCGATTGAAGTCCCCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCTTGGTTTTCGTCCAGCCACCTCCGCAAAGCCAAAAAGATTCCTCGGTATCTTTAAGTCCCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTc                                                                              <  1:168903/250‑1 (MQ=255)
                                                                                                                                                                aaaaaaccaaaaaccccTGCCCGATTGAATCCCCCGCCAAAGATGCCAAAGGCATTTGGTCGAATCGTGAACAGAGCATGGTTGGCGTTCAGGCACTTACGTTAAGCCAGAAAGATTCCTCGGTATCGTTAATTCCCAAAATATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAg                                                                            <  1:355291/236‑1 (MQ=255)
                                                                                                                                                                  gaccctgatatccactagCCGATTCAAGAAACCGCCGAAGATCTCAAAGGCAATGTGTCGAATAGTAAACAGCGCAAGGTTCTCGTTCAGGCACCTACGCTAATCCAGAAAGATTCCTCGGTATCGTTAAGTACCCACACATTGAACGCGGATTACCATTCAACCGTCACACTGCCTTTTATTGCGCATGATGCAGCAAGAAATCCTGTTGTCGGGCTGGTGCGCTCGACGCGTCACGACGGGGTTCAgg                                                                           >  2:258842/18‑250 (MQ=255)
                                                                                                                                                                              cccgggccgttgaaaGTCCCCGCCGAAGATGTAAAAGGCAATTTGTCGAATCGTGAAAAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCAAAACATTGAACGCGGATTCCAATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTc                                                             <  1:93837/238‑1 (MQ=255)
                                                                                                                                                                                cggtctgttgtaattccccgccgAAGATGTCAAAGTAAATTTGTCTAATCGTGACCGGAGCATGTTTTTCGTTCAGTCACCTAGGCAAAGCCAAAAAAATCCCTCGGTTTTGTTAAGTACAAAACCTTTGAACGCGGTTCCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTg                                                           <  1:354193/234‑1 (MQ=255)
                                                                                                                                                                                cTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAACCGTGAACAGAGCATGGTTGTCGTTCAAGCACATACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGCTTCCCATTCAACCGCCACACTCACTTTTATTGCGCATGATGCAGCAGGTACTCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGAGTTCAGGACATCACCATTTCTg                                                           >  1:294985/1‑251 (MQ=255)
                                                                                                                                                                                    ccgttgaaaGTCCCCGCCGAAGATGTAAAGGGCAATTTGAAGAATGTGAAACAGAGCATGGTGTTCGTGCAGGCCCACCCGCTAAGCCAAAAATATTCCTTGGTATCGTAAAGTACCAAAACAGTGAACGCGAATTCCCAGTCAACCGCCACACGGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGGCACGAAGGTGTTCAGGACATCACCCTTTCTGACTg                                                       <  2:419249/244‑1 (MQ=255)
                                                                                                                                                                                           aagcccccgccgAAGATGTCAAAGGCAATTGGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTCCGCTAAGCAAAAAAGATTCCTCGGTATCGTTAAGTACCCAAACATGGAACGGGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGAt                                                <  1:270762/245‑1 (MQ=255)
                                                                                                                                                                                              tCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAAt                                             >  2:45098/1‑251 (MQ=255)
                                                                                                                                                                                                      gAAGATGTAAAAGGCATTTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCCCCTACGCTAAGCCAAAAAGATTCCCCGGTATCTTTAAGTACCCAAACATTGAACCCGTATCCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAATGGTGACgg                                     <  1:525150/251‑1 (MQ=255)
                                                                                                                                                                                                            ggcAAAGGAAATTTGTCGAATCGTGAACAAAGCATGGTTGTCGTTAAGGCAACTATGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGGGTTCAGGACATCACCCTTTCTGCCTGGAAAGATAATGGTGACGGAAGCt                                >  2:348807/3‑250 (MQ=255)
                                                                                                                                                                                                                gccttccccatctaaaccGTGAACAGACATGGGTTGCCGTTCAGCCACCTACCCTAACCCAGAAAGATCCCCCGGTAGCGTTAAGTCCCCAAACATTGACCGCGGATCCCCATTCATCCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAATGGTGACGGAAGCTATAcc                           <  1:67462/234‑1 (MQ=255)
                                                                                                                                                                                                                   gCAATTTGTCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAATGGTGACGGAAGCTATAccc                          >  2:285053/1‑249 (MQ=255)
                                                                                                                                                                                                                           tCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGCAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAATGGTGACGGAAGCTATACCCAGATCCTGAc                >  1:283748/1‑251 (MQ=255)
                                                                                                                                                                                                                           tCGAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAATGGTGACGGAAGCTATACCCAGATCCTGAc                >  1:117656/1‑251 (MQ=255)
                                                                                                                                                                                                                             gAATCGTGAACAGAGCATGGTTGTCGTTCAGGCACCTACGCTAAGACAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCACATTCAACCGCCACAATGACATTTATTGCGCATGATGCAGCAGGTCATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATACACCTTTCTGACTGGAAAGATAATGGTGACGGAAGCTATACCCAGATCCTCAcc               >  1:258529/1‑250 (MQ=255)
                                                                                                                                                                                                                             gAATCGTGAACAGAGCATGATTGTCGTTCAGGCACCTACGCTAAGCCAGACAGATTCCTCGGTCTCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGCCTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAATGGTGACGGCAGCTATACCAGATcggacgagg             >  2:67462/1‑243 (MQ=255)
                                                                                                                                                                                                                                     aaCAGAGACTGGTTGTCGGTCTGGCACCGCCGCTAAGCAGAAAAGATTCCGCGGATTCGTTAAGTACCCAAACATTAACCGCGGATCCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGTACATCACCCTTTCTGACTGGAAAGATAATGGTGACGGAAGCTATACCCAGATCCTGACCACAGGAGCg      <  1:445486/251‑1 (MQ=255)
                                                                                                                                                                                                                                          gagCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAATGGTGACGGAAGCTATACCCAGATCCTGACCACAGGAGCGATGt  >  1:582018/1‑251 (MQ=255)
                                                                                                                                                                                                                                          gagCATGGTTGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAATGGTGACGGAAGCTATACCCAGATCCTGACCACAGGAGCGATGt  >  1:278524/1‑251 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                   
TCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTGGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAATGGTGACGGAAGCTATACCCAGATCCTGACCACAGGAGCGATGT  >  NC_000913/2046264‑2046747

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: