| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,751,537 | 0 | A | C | 43.8% | 48.4 / 12.4 | 48 | V111G (GTT→GGT) | yiaT | outer membrane protein YiaT |
| Reads supporting (aligned to +/- strand): ref base A (16/11); new base C (0/21); total (16/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.44e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CATCCTGCGCGGAATAACTTGCCAGACCGCTACGACGGGACTCACTCTCTGAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑ACAGACGACCTATCTGCATTTTGTGG‑AATACCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTATTTTCATTATAACCGCGATAAGGCGATTCATTATAAGC > NC_000913/3751295‑3751778 | cATCCTGCGCGGAATAACTTGCCAGACCGCTACGACGGGACTCACTCTCTGAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑ACAGACGACCTATCTGCATTTTGTGG‑AATACCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGcc < 2:453723/251‑1 (MQ=255) aaaCTTGCCAGACCGCTACGACGGGACTCCCTCTCTGAAATCCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑ACAGACGACCTATCTGCATTTTGTGG‑AATCCCGATAGCTCCCCCCCCCAGCCGTTGTTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATc < 1:328866/250‑1 (MQ=255) aaaCTTGCCAGACCGCTACGACGGGACTCACTCTCTGAAATGCCATAGTAATAGTCACTAAAATTCTCGTCATAATAGAGAACGCCCAGCGCGGGTGTCAGCG‑ACAGACGACCTATCGGCATTTTGTGG‑AATACCGATAGCTCCCCCCCCCAGCCGTTGCTGT‑TATCCAGACC‑GTCCGCAGCTGCAGAGGCTTTCACGTTTC‑‑CCAAACGCTCGTGGTAATACCAGTAACCCCCCGCCATAGCCGTACTATc < 1:114842/250‑1 (MQ=255) cTTGCCAGACCGCTACGACGGGACTCACTCTCTGAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑ACAGACGACCTATCTGCATTTTGTGG‑AATACCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGCTACCAGGCAACCCCCGCCATAGCCGTACTATCACg > 1:251427/1‑251 (MQ=255) gCCAGACCGCTCCGAGGGGACTCACTCTCTGAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCGGGTGTCAGCG‑ACAGACGACCTATCTGCATTTTGTGA‑AATACCGATAGCTCCCCCCCCCAGCCTTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCACCCCCCGCCATAGCCGTACTATCACGCt < 1:509097/250‑1 (MQ=255) cactcTCTGAAAGGCCATAGTAATAGCCCCTGAATTTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑ACAGACGCCCTATCTGCATTTTGTGG‑AATCCCGAAAGCCCCCCCCCCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATa < 1:206305/250‑1 (MQ=255) aaTGCCATATTAATAGCCACTGAATCTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑ACAGCCGCCCTATCTTCATTT‑GTGGGAATCCCGATAGCCCCCCCACCCAGCCGTTGCTTT‑TACCCAGAAC‑GTCCGCAGCTGCAGAGGCTCTCACGTTTC‑‑CCCAACGCTCGTGGTGATCCCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTAt < 2:481241/251‑1 (MQ=255) aTGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑CCGGACGACCTATCTGCATTTTGTGG‑AATACCGATAGCTCCCCCCCCCAGCCGTTGCTTT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGTTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATc < 1:507478/251‑1 (MQ=255) cATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑ACAGACGACCTATCTGCATTTTGTGG‑AATACCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGt > 2:112500/1‑250 (MQ=255) cATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑ACAGACGACCTATCTGCATTTTGTGG‑AATACCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGt > 2:192100/1‑250 (MQ=255) cATAGTAATAGCAACTGAAATTCTCGTCAAAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑ACAGACGACCTATCTGCATTTTGTGG‑AATCCCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTa < 1:348397/251‑1 (MQ=255) tAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑ACAGACGACCTATCTGCATTTTGTGG‑AATACCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAgg > 1:298311/1‑251 (MQ=255) tAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑CCAGACGACCTATCTGCATTTTGTGG‑AATACCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGATCaa > 1:421604/1‑250 (MQ=255) tAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑ACAGACGACCTATCAGCATTTTGTGG‑AATACCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACACTCGTGGTGATACCATGCAACCCCCGCCATAGCCGTCCTATCACGCTTATAAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCaa > 1:561099/1‑250 (MQ=255) cTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑ACAGACGACCTATCTGCATTTTGTGG‑AATACCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTcc > 1:162482/1‑249 (MQ=255) aaagaccGCCCGGCGCAGGTGTC‑GCGCACAGACGCCCTATCTGCTTTTTGGGG‑AATCCCGAAACCCCCCCCACCCAGCCGTTGCTTT‑AATCCAAACC‑GCCCGCAGCTGCAGAGGCTTTCACGGTCC‑‑CCCACCGCCCTTGGTAATACCGGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGt < 2:467547/244‑1 (MQ=255) agaccGCCCAGCGCAGGTTTCAGCG‑ACAGCCGACCTATCTGCATTTTGTGG‑AATCCCGATGCCTCCCCCCCCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCCCGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGTTCAg < 1:189156/247‑1 (MQ=255) aaCGCCCACCCCAGGTTTCAGCG‑ACAGACGACCTACCTGATTTTTGTGA‑AATACCGATAGCCCCCCCCCCCAGCCGTTGC‑GTCAACCCACACC‑GTCCGAAGCGGCGGAGGTTTTCTCGTTCC‑‑CCCAACGCTCGTGGGAATCCCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAAGTCCAGCGGCATCCAGGATGCGGTCAGGc < 2:122506/251‑1 (MQ=255) ccAGCGCAGGTGTCAGCG‑ACAGACGACCTATCTGCATTTTGTGG‑AATACCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GCCCGCAGCTGCAGCGGCTTTCACGGTTC‑‑CCCAACGCTCGGGGTGATACCAGGCAACCCCCGCCATCGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTGGGGTCAAATTCCAGCGGCATCCAGGATGCgacacggctaagt > 2:232635/1‑239 (MQ=255) cggCG‑ACAGACGCCCTATCGTCATTTGGGGG‑AATACCGATAGCTCCCCCCCCCAGCCGTTGCTGT‑TACCCAGACC‑GTCCGCAGCTGCAGAGCCTTCCACGTTTC‑‑CCCACCGCTCGTGGTGATCCCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCAc < 1:112500/249‑1 (MQ=255) cAGCG‑ACAGACGACCTATCTGCATTTTGTGG‑ACTCCCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCACATTCCAGCGGCATCCAGGCTGCGGTCAGGCTAAGTTCATTTTTTTCAc > 2:550183/1‑251 (MQ=255) acaacccaccttccttctttttGGGG‑AATACCGATAGCCCCCCCCCCCAGCCGTTGCTGT‑TATCCAGAAC‑TTCCGCAGCTGCAGAGCCTTCCACGGTCC‑‑CCCACCGCTCGTGGTGATCCCGGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGc < 1:232635/233‑1 (MQ=255) gacgacCTATCTGCATTTTGTGG‑AATACCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTACGTTCATTTTTTTCACTTTGCGAc > 2:207942/1‑251 (MQ=255) gacCTATCTGCATTTTGTGG‑AATACCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCTAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGAc > 1:405573/1‑248 (MQ=255) ttttgtagaacccagacaGCTCCCCCCCCCACCGGTCGCTTT‑TATCCAGAAC‑CCCCGCAGCTTAAGAGGTTTCCACGGTCC‑‑CCCAACGCTCGTGTTGATACCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGTCAGAATAAAACCTaa < 2:298311/233‑1 (MQ=255) tttGTGG‑AATACCGATATCCCCCCCACCCACCCGTTGCGGT‑TATCCAGACC‑GCCCGCAGCTGCAGAGGTTTCCCCGGTCC‑‑CCCAACGCTCGTGGTGATTCCAGGAACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAAc < 1:579596/250‑1 (MQ=255) tgtgaataccggatgtccccccccccCAGCCGTGGCTGT‑AACCCGAAAC‑GTCCGCACCTGAAGAGGTTTACACGGTCC‑‑CCCAACGCTCGTGGTGTTACCAGGCACCCCCCGCCATAGCCGTACGATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGt < 2:12277/232‑1 (MQ=255) gg‑AATACCGATAGCTCCCCCCCCCAGCCGTTGCTGT‑TATCCAGACC‑GTCCGCAGCTGCAGAGGTTTTCACGGTCC‑‑CCCAACGCTCGTGTTGATCCCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGt < 1:148575/250‑1 (MQ=255) atcccGATACCTCCCCCCCCCAGCCTTTGTTGT‑TATCCAGAAC‑GTCCTCAGCTGCAGAGGCTTCCGCGTTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCTCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGa < 1:43463/248‑1 (MQ=255) agcctaTAGCCCCCCCGCCCACCCGTTGTTGT‑AATCCAGAAC‑GTCCGCATCTGCAGAGGCTTTCACGGTCC‑‑CCCAACGCTCGGGGGGAGACGAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCGTTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGAc < 1:246169/246‑1 (MQ=255) cgccccccccccCGGCCGTTCCGGT‑TATCCAGAGC‑GTCCGCAGCTGCAGAGGCTTTCCCGGTTC‑‑CCCAACGCTCGTGGTTATCCCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATa < 1:311753/247‑1 (MQ=255) cccccccaGCCTTGGCTGT‑TATCCAGAAC‑GCCCGCAGCTGCAGAGGCTTCCCCGTTTC‑‑CCCACCGCCCGTGGGGATCCCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGt < 1:410955/247‑1 (MQ=255) gCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCtt > 1:237338/1‑251 (MQ=255) gTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAAAGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCAt > 1:551018/1‑251 (MQ=255) gCTGT‑TATCCAGAAC‑GTCCCAAGCGGCAGAGGCTTTCCCGGTTC‑‑CCCAACGCTGGGGGTGATACCCGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAAc < 2:550629/251‑1 (MQ=255) cTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACt > 1:84060/1‑251 (MQ=255) gT‑TATCCAGACC‑TCCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGTTGATACCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTaa < 1:93376/251‑1 (MQ=255) gT‑TATCC‑GAACCGTCCGCAGCTGCAGAGGCTTTCACGTTCC‑‑CCCAACGCTCGTGTTGATACCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACt < 1:232568/249‑1 (MQ=255) cccAGAAC‑GTCCGCAGCTGCAGAGGCTTTCCCGGTCC‑‑CCCAACGCTCGTGGTGATACCAGGAAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAg < 1:123694/250‑1 (MQ=255) cccAGCTGCAGAGGTTTTCACGGTTC‑‑CCCAACGCTCGGGTTGATCCCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCt < 1:207942/249‑1 (MQ=255) gagctccattggcttccccGGTCC‑‑CCCAACGCCCGTGGGTATACCAGTCACCCCCCGCCATAGCCGTACTATCACGCGTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGTAATTGCCTTc < 2:251427/233‑1 (MQ=255) gCTGCAGAGACTTTCACGGCTCAACCCA‑‑GCTCGTGGTGATACCAGGCAACCACCGCCCTAGTCGTCCTATCCCGCTTATCAAGCTGTTGCATGGCATAATCGTAATTATCGGTAGGGTCAAATTCCAGCGGCATCCCGGATACGGTCCTGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACATAACGTGGTCTGACGAACATACAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGt > 2:534880/1‑251 (MQ=255) ttCACGTTCC‑‑CCCAACGCTCGTGGTGTTCCCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATATCTAATCAGCGGAATTGCCTTCGTATTTTCATta < 1:347103/249‑1 (MQ=255) cacgtttcccacaCGCTCGTGGTGATACCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGTCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTATGTGCATTATaa < 1:175019/238‑1 (MQ=255) c‑‑cccACCGCTCGTGGTGATCCCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTATTTTCATTATAACCGCGATa < 2:535935/251‑1 (MQ=255) aaCGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTATTTTCATTATAACCGCGATAAGGc > 2:472985/1‑251 (MQ=255) cGTGGTGATACCAGGCACCCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTATTTTCATTATAACCGCGATAAGGCGATTc < 1:313822/250‑1 (MQ=255) acccggtcAACACCCGCCATATCCGTACTATCACGCTTATCAAGCTGGTGCATGGCATAATCGTCATTATCTGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATACAACCTAACGTGGTTTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTATTTTCATTATAACCGCGATAAGGCGATTCATTATAAGc < 1:9964/244‑1 (MQ=255) | CATCCTGCGCGGAATAACTTGCCAGACCGCTACGACGGGACTCACTCTCTGAAATGCCATAGTAATAGTCACTGAAATTCTCGTCATAATAGAGAACGCCCAGCGCAGGTGTCAGCG‑ACAGACGACCTATCTGCATTTTGTGG‑AATACCGATAGCTCCCCCACCCAGCCGTTGCTGT‑TATCCAGAAC‑GTCCGCAGCTGCAGAGGCTTTCACGGTTC‑‑CCCAACGCTCGTGGTGATACCAGGCAACCCCCGCCATAGCCGTACTATCACGCTTATCAAGCTGTTGCATGGCATAATCGTCATTATCGGTAGGGTCAAATTCCAGCGGCATCCAGGATGCGGTCAGGCTAAGTTCATTTTTTTCACTTTGCGACAGAATAAAACCTAACGTGGTCTGACGAACATAAAAAGTATCACCTTCATAACTAATCAGCGGAATTGCCTTCGTATTTTCATTATAACCGCGATAAGGCGATTCATTATAAGC > NC_000913/3751295‑3751778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |