| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 523,387 | 0 | A | G | 37.3% | 71.0 / 15.6 | 59 | M43V (ATG→GTG) | rhsD | protein RhsD |
| Reads supporting (aligned to +/- strand): ref base A (18/19); new base G (22/0); total (40/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.11e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
TGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAACGACAACGGCGGGCGGAGCATTCACTTTGAGCCGCT > NC_000913/523143‑523637 | tgaGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGACTTGTGTGTCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGAGGTCCCCATGTCCAGGGTTTGGCAGGTGAAAGAATTGGCGCGCCCACCGGCTGGGCGGGCGCGGGGTGT‑GCGGGGGGGGTGAcct > 2:446145/1‑249 (MQ=255) aaggttATGTGAAAAAGATATAAATACAATAGCTGGTCTTGGGTGTCATGTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCGCTGTATATGAGCGGAAAACCAGCGGCGCGTCAGGTATATGTGACTCAGTAGGGCGGTCCCAGTGTCGAGGGTGCGGGAGTTGTAGGAGTTGTCGCCCCGACCGCCGTGGCGGGCTCGGTTTGT‑CCGGACGCTATGGCTG‑C‑GGG‑CAAccc < 2:277884/246‑1 (MQ=255) gTTTATGTGAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGGTCGGCAGGGGTAAGAATTGGCGCGCCCCCCGGCGGGGCGGGCTCGGGGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCggg > 1:93520/1‑250 (MQ=255) ttATGTGAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCCTTTTCCAGGGTTCGGCCGGGGTAAAAATTGGCGCGCCCACCGGCGTGGCGGGGTCGG‑GTGTGCCGGGGGGGGTGGCTT‑C‑GGG‑GAAccccgca > 1:125259/1‑246 (MQ=255) tgAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCCGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCCGGGGTCGGCAGGGGGTAGAACTGGCGCGCCCCCCGGCGTGGCGGGCTCGGTGTGT‑CCCGGGGGGGTGGCTT‑C‑GGG‑CCACCCGGTaaaaccc > 1:230452/1‑247 (MQ=255) aaaaTATATAACTACATTAGCTGGTCTTGTGTGTCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCCTTGTCCAGGGGTCGGCAGGGGTAAGAATTGGCGCGCCCACCGGCGTGGCGGGCTCGGGGTGT‑CCGGGGGGGGGGACTT‑C‑GGG‑GAACCCGGGAAAACCgccg > 1:417839/1‑249 (MQ=255) aaaaTATATAAATACATTAGCTGGTCTTGTGTGTCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCgctg < 2:6161/251‑1 (MQ=255) aaaTACATTAGCTGGTCTTGTGTGTCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGGGTAAGAATTGGCGCGCCCCCCGGCGTGGGGGGCTCGGGGTGT‑CCGGGGGGGGTGACTT‑C‑GGG‑CAACCCGGGAAATCCGCTG‑CCggggggg > 1:117769/1‑249 (MQ=255) aGCTGGTCTTGTGTGTCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCCTTGTCCCGGGTTCGGCAGGGGTAAGAAATGGCGCGCCCACCGGCGGGGCGGGCTCGGGGTGT‑CCGGGCGGGGTGGCTT‑C‑GGG‑GAAACCGGGAAAACCGCCG‑CTggggggggaggggcgg > 1:549739/1‑240 (MQ=255) ggTCTTGTGTGTCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAAGCCGCTG‑C‑GGGGGTGTAAGGTGCTGCCCg < 2:69901/251‑1 (MQ=255) ttGTGTGTCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGcc < 2:85656/245‑1 (MQ=255) ttGTGTGTCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGGGTAAGAATTGGCGCGCCCACCGGCGGGGCGGGGTCGGGGGGG‑CCGGGCGGGGGGAATT‑C‑GGG‑CAACCCGGGAAATCCCCTG‑CTGGGGGGG‑GAGGGGCTGCCCgaacg > 1:85656/1‑247 (MQ=255) gtgtCATTTTATTTTTCTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGAc < 2:149528/250‑1 (MQ=255) tgtCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCCTTTTCCCGGGGTCGGCCGGTGTAAGAATTGGGGCGCCCACCGGCGTGGCGGGCTCGGGGGGT‑CCCGGGGGGGGGACTT‑C‑CGG‑GAAACCGGGAAATCCCCTG‑CTGGGGGCG‑AAGGGGGTGCCCcgcggaacgg > 1:329689/1‑245 (MQ=255) gtCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCCTTTTCCCGGGGTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGGGGGCTCGGGGGGT‑GCGGGCGGGGTGACTT‑C‑GGG‑GAACCCGGGAAAACAGCTG‑CCGGGGGGG‑GAGGAGAGGCCCGGGGAGACggg > 1:119104/1‑250 (MQ=255) ttttattttTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCCGGGTTCGGCAGGGGTAAGAATTGGCGCGCCCACCGGCGGGGCGTGCTCGGTGGGT‑CCGGGGGGGGTGAATT‑C‑GGG‑GCACCCGGGAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCgagaagggactt > 1:105718/1‑243 (MQ=255) attttTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCCTTGTCCAGGGTTCGGCAGGGGGAAGAATTGGCGCGCCCACCGGCGGGGGGGGCTCGGGGTGT‑GCGGGCGGGGGGGCTT‑T‑GGG‑GCACCCGGGAAAACCGCTG‑CTGGGGGGG‑AAGGGGCTGCCCggggggggcggcctttggg > 1:501755/1‑234 (MQ=255) ttttttGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCCGGGGTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCCGGGTGT‑GCGGGGGGGGTGGCTT‑CCGGC‑CAACCCGG‑AAATCCGCTG‑CTGGGGGCG‑GAGGTGCTGGCCGGCggggccggccatgcgccgcc > 1:293976/1‑232 (MQ=255) ttgttgCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGGGTGT‑CCGGGCGGGGTGGCTT‑C‑GGG‑CAACCCGGGAAATCCGCTG‑CTGGGGGGG‑GAGGGGCTGCCCGGCGGGGCGGGCCCTGCGC‑Tgccccgc > 1:475671/1‑248 (MQ=255) tgttgCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCCGGGTTCGGCAGGGGGAAGAATTGGCGCGCCCACCGGCGTGGGGGGCTCGGTGTGG‑CCGGGGGGGGTTGCTT‑C‑GGG‑CAACCCGGCAAATTCCATC‑CTTGGGGGG‑CAGGTGCTGCCCGGCGCGAGGGACCCTGCGC‑Tgccccgcc > 1:529123/1‑251 (MQ=255) gttgCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑Tgcccggccc < 2:321910/251‑1 (MQ=255) tgCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCCTTGGCCAGGGGTCGGCCGGTGTGAGAATTGGCGGGCCCCCCGGCGTGGCGTGCCCGGGGGGT‑CCGGGCGGGGTGGCTT‑C‑TGG‑CAACCCGGGAAATCCCCTG‑CCGGGGGCG‑GAGGGGGTGCCCGGCGGGGCGGGCCTTGCTC‑Tgcccccccccc > 2:545842/1‑244 (MQ=255) ggATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCCGGGGTCGGCAGGGGGAAGAATTGGCGCGCCCACCGGCGTGGCGGGCTCGGTGTGT‑CCGGGCGGGGGGGCTT‑C‑GGG‑GAACCCGGGAAAACCGCCG‑CTTGGGGCG‑GAGGGGCTGCCCGGCGAGACGGGCCTTGCGCCTGCCCG‑Cccgccgccggttctt > 1:250182/1‑245 (MQ=255) aaCTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCt < 1:201140/251‑1 (MQ=255) aaCTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGGTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGGGGCGGGCGCGGGGTGT‑CCGGGCGGGGTGACTT‑C‑GGG‑GAACCCCGGAAAACCGCCG‑CTGGGGGGG‑GAGGGGCTGCCCGGCGGGGCGGACCTTTGGC‑TGCCCGGCCCCCTGcccgttaatctctccccgcccc > 1:151627/1‑231 (MQ=255) aCTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCAATGGCCCGGGTTCGGCCGGGGGAAGAATTGGGGCGGCCACCGGCGTGGGGGGCTCGGGGGGT‑TCGGGGGGGGGGGCTT‑C‑GGG‑GAACCCGGGAAATACGCTG‑GTGGGGGGG‑CGGGGGGGGCCCGGCGCGACGGGGCTTGCGC‑CGCCccgcccgcgcccgggccttctctcccccacccc > 2:12182/1‑226 (MQ=255) aCTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTAcc < 1:162676/251‑1 (MQ=255) cTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGGTCGGCAGGGGTAAGAATTGGCGCGCCCACCCGCGTGGCGGGCTCCGGGTGT‑TCGGGCGGGGTGACTT‑C‑GGG‑CAACCCGGGAAAACCGCTG‑CTGGGGGGG‑GAGGGGCTGCCCGGCGAGACGGACCTTTCGC‑TGCCCCGCCCGCTGCCGTTCATTCTCTCCCGCCCCTACAACAGCTACCg > 1:217816/1‑251 (MQ=255) ttATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCg < 1:339058/249‑1 (MQ=255) atGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGGTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCCGGCGGGGTGACTT‑C‑TGG‑CAACCCCGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGGCCTTGCGG‑CGCCCCGCCCCCCGCCCTTCCTTCTCTCCCCCCCCTACagcagcccccggcccg > 1:9906/1‑240 (MQ=255) aaaCCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCCTTGGCCAGGGTTTCGCCGGTGTAAGAATTTGCGCGCCCCCCGGCGGCGCGGGCTCCGGGGGT‑TCTGGCGGGGTGGATC‑C‑GGG‑CAACCCGGTTAATCCCCTG‑CTGGGGGGG‑AAGGCGGTGCCCGGCGAGACCGACCTTCCGC‑TCCCCGCCCCGCTGCCGTTTCTTCTCTCCCGCACCCACCGCAGCGACCGGACGAAGaacccgcc > 1:42879/1‑244 (MQ=255) aaaCCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTTTCCAGGGTTTGGCAGGGGTAAGAATTGGGGCGCCCACCGGCGTGGGGTGCCCGGTGTGT‑CCGGGCGGGGTGGCTTTC‑GGG‑‑AAACCGGGCAATCCCCTGGCGGGGGGCG‑AGGGGGC‑GCCCGGCGGGGCGGACCCTTCGC‑CGCCCGGCCCCCGGGCGTTCCTTTTCTCCCGCACCCAAAGGCGCCTCCGGACGAAGACGcccgc > 1:45380/1‑248 (MQ=255) ccAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTACATTCTCTCCCGCACCTACAGCAGCTATCGGACGAAGACGCCTGCAcc < 2:42467/251‑1 (MQ=255) agaTATGACTCAGTATGGCGGTCCCATTGGCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGcc < 2:417839/251‑1 (MQ=255) gaTATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTTGGCAGGGGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGGTCGGGGTGG‑CCGGGCGGGATGACTT‑C‑GGGGAAACCCGG‑AAAACCGCCG‑GTGGGGGGG‑AAAGGGCTGCCCGGCGGGACGGACCTTTCGC‑TGCCCCGCCCGCCGCCGGTCCTTCTCTCCCCCACCCACAGCCGCCACCGGGCGGAAACGGCTGCACCGGTGGGGGGTTTTGGccc > 1:562776/1‑251 (MQ=255) gTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGGTTTCGGCCCCGGCTGGaa > 1:217429/1‑249 (MQ=255) ggTCCCATTGGCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTc < 2:349315/251‑1 (MQ=255) gTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACCGCAGCTACCGGCCGACGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTGTTATATCCg > 2:137010/1‑251 (MQ=255) ggTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTAc > 1:549230/1‑250 (MQ=255) ggTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGGTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTAc > 2:221522/1‑250 (MQ=255) gTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGCGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTAc > 1:235970/1‑249 (MQ=255) tAAGACTTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGGTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGAc > 1:166301/1‑251 (MQ=255) aaGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACg < 1:459314/251‑1 (MQ=255) ggCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGAt > 1:522780/1‑251 (MQ=255) ggCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTGCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGAt < 2:230452/251‑1 (MQ=255) gcgcCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACCGCTACGTGATGACGGACTGATACt > 1:13349/1‑251 (MQ=255) gcCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTc > 1:386805/1‑250 (MQ=255) ccACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAAc > 1:298841/1‑251 (MQ=255) ggcgtggcgtGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGCGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGCTCATTCTCTCCCGCCCCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAACGAcc > 1:575463/1‑249 (MQ=255) gtggcgtgCTCGGTGTTT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCCCCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGCAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAACGACAAcgg > 2:575481/1‑251 (MQ=255) ggggtgCGCGGTGTGT‑CCGTGCGGGATGATGT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGTCGGACCTTGCGC‑TGCCCGGCCCGCGGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCTGACGAAGACGCCTGCACCGGTGGGCGTTTGCGGCGCCGGCTGGGAAGCGCCCTCTGATAGCCGCTTACAGCTACGTGATGATGGACTGATACTCAACTATAAcggcg < 2:306154/248‑1 (MQ=255) ggcgtgCTCGGTGTGG‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAACCACAAcggcg > 2:464938/1‑251 (MQ=255) gcgtgCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAACGACAAcggcgg < 2:93520/251‑1 (MQ=255) gtgCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAACGACAACggcgggc < 1:126899/251‑1 (MQ=255) gCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGGCTGATACTCAACGACAACggcggggcg > 2:417771/1‑248 (MQ=255) gtgtgt‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAACGACAACGGCGGGCGGAGCAt < 2:125259/251‑1 (MQ=255) gt‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAACGACAACggcggggggggggattac > 1:496707/1‑239 (MQ=255) ccGGGCGGGACGACTG‑C‑GGG‑CAACCCGGTAAATCCCCTG‑CTGGGGTCT‑AAGGTGCTGCCCGGCAAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCGACCGGAGGAAGACTCCTGCACCGGTGGGCGTTTTCGGCCCCGGGTGTAAGGTGCCTTCTGATTCCCTCTTACAGCTACGTGATGACGGACGGATGCTCAACGACaagtgcgggttgatcagtcac < 2:533014/249‑20 (MQ=255) gggATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAACGACAAcggcggctggggcagttccattgt > 2:793/1‑230 (MQ=255) aTGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCTCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATTCTCAACGACAACGGCGGGCGGAGCATTCACTTTGAGCCgct < 2:533099/251‑1 (MQ=255) | TGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCATTTTATTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGT‑CCGGGCGGGATGACTT‑C‑GGG‑CAACCCGGTAAATCCGCTG‑CTGGGGGCG‑AAGGTGCTGCCCGGCGAGACGGACCTTGCGC‑TGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAACGACAACGGCGGGCGGAGCATTCACTTTGAGCCGCT > NC_000913/523143‑523637 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |