| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,966,530 | 2 bp→TT | coding (114‑115/1260 nt) | rho → | transcription termination factor Rho |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,966,530 | 0 | C | T | 100.0% | 40.5 / NA | 14 | I38I (ATC→ATT) | rho | transcription termination factor Rho |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (7/7); total (7/7) | |||||||||||
| * | NC_000913 | 3,966,531 | 0 | C | T | 100.0% | 40.4 / NA | 14 | L39L (CTG→TTG) | rho | transcription termination factor Rho |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (7/7); total (7/7) | |||||||||||
CATGAGTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAA > NC_000913/3966320‑3966760 || cATGAGTCGATGACCGTAAACAGGCATGGATGATCCTGCCATATCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTg < 1:128724/251‑1 (MQ=255) gAGTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATg < 2:59065/251‑1 (MQ=255) aCAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAAATCACACCACTATTAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAGTATGGGGCTGGAAAACCTGGCTCGTATGCGTTAGCTGGACATTTTTTTTGACATTTTGAAGCCGCACGCAAACAGTGGCGACGATATCTTATGTGTTGGCGTACGGGAGATAtt > 1:100183/1‑251 (MQ=255) ttCACAACATTAAGTTCGAGATTTACCCCACGTTTAAGAACTCACACAACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAACACCTGGCTCGTATGCGTCAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGCGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTc > 1:246362/1‑251 (MQ=255) tCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTc < 1:264120/250‑1 (MQ=255) ttAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCAGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATTTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGCTTTGGTTTCCTCCGTTCCGCaagc > 2:47180/1‑246 (MQ=255) agaTTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCt < 2:140137/251‑1 (MQ=255) gTTTAAGAACTCACACAACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCAGATCACTCTCGGCGAAAATATGGGGCTGGACAACTTGGCACGTATGCGTAAGCAGGACTTTATTTTTGCCACTTTGAAGCAGCACGCAAAGAGTGGCGAAGACTTCTTTGGAGATGGCGTACTGGAGATATTGCAGGGTGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCTTACCTCGCCGGTCCtgtt > 2:17980/1‑249 (MQ=255) aTGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAg < 1:178600/251‑1 (MQ=255) tACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCaaa < 1:2156/248‑1 (MQ=255) cggAGCTGATCACGCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTGCCTCCGTTCCGCAGACAGCTCCt < 2:187879/178‑1 (MQ=255) cTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCCTTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCt > 1:187879/1‑180 (MQ=255) tCACTATCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTACGCAGGACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCCGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCCACCTCCGCACTGGTGATCCCctctct > 2:253596/1‑251 (MQ=255) ggACATTATTTTTGCCATTTTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGaa > 1:46472/1‑249 (MQ=255) || CATGAGTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAA > NC_000913/3966320‑3966760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |