Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 7,132 A→C G276G (GGT→GGG yaaJ ← putative transporter YaaJ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009137,1320AC100.0% 46.8 / NA 21G276G (GGT→GGGyaaJputative transporter YaaJ
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (14/7);  total (14/7)

ACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGAACCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATATCCCGCCGCGCCGCCTGCCGCTTCCTGCCAGCCAAAAGCACTCTCAAAAATAGACCAAATGACGTGGGGAAGTTGCCCGATATTCATTACGCAAATTACCAGGCTGGTCAGTACCCAGATTATCGCCATCAACGGGACAAAGCCCTGCATGAGCCGGGCGACGCCATGAAGACCGCG  >  NC_000913/6916‑7377
                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                     
aCCCCAGGCACCAATTAACCCCCGCATCGCCTCCTGGATAAGCTGGATCCCTTCCAGCGGCCTGTAGGTTGTGCCGTTACCCGCCAGAAATCTCAGCATGGCGCTTGCCGTACAGATGACCAGGGAGTCGATCAACATGCCAAACATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCCGCCGCTGCCGCGTTTGGCGCCGCCCCCATTCCCGCCTCATTGGAAAACATACTGAGCt                                                                                                                                                                                                                     >  2:16477/1‑251 (MQ=255)
               taacACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGACCCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAACACCGTTAGTa                                                                                                                                                                                                       >  1:51257/4‑250 (MQ=255)
                                               tACCTTCCAGCGGCATGTAGGGTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGACCCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATATCCcgccgcgccg                                                                                                                                                                      >  1:146679/1‑251 (MQ=255)
                                                      cAGCGGCATGTAGGTTGTGCCGTTACCCCCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGCGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTAGACCCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATATCCCGCCGCCCCGCCTGCCg                                                                                                                                                               >  2:264482/1‑251 (MQ=255)
                                                         cGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGCCAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGACCCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGGATCTCCCGCCGCGCCGCCTGCCGCtt                                                                                                                                                            >  2:31189/1‑251 (MQ=255)
                                                             atgtggtttgtcccgtaccccGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAACCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGACCCCATTCCCGCCTCATTGGAAAACATACTGCGCCGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATATCCCGCCGCGCCGCCTGCCGCTTCCt                                                                                                                                                         <  1:162903/232‑1 (MQ=255)
                                                                                  gCCAGTAATATCAGCATGGCGATTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGACCCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATATCCCGCCGCGCCGCCTGCCGCTTCCTGCCCGCCAAAAGCACTCTCaa                                                                                                                                    >  2:246582/1‑250 (MQ=255)
                                                                                                      gcTTGCCGTACAGATGACCAGGGTGACGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGACCCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATATCCCGCCGCGCCGCCTGCCGCTTCCTGCCAGCCAAAAGCACTCTCAAAACTAGACAAAATGACGTggg                                                                                                               >  2:200387/1‑251 (MQ=255)
                                                                                                       cTTGCCGTCCAGATGACCAGGGCGTCGCTAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGACCCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTCATCGCCTGGCTTAAGGCATATCCCGCCGCGCCGCCAGCCGCTTCCTGACAGCCAACAGCACTCTCAAAAATCGACCAACTGCCGTgggg                                                                                                              >  2:162493/1‑251 (MQ=255)
                                                                                                       cTTGCCGTACAGATGACCAGGGTGTCGATAAAACTGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGACCCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATATCCAGCCGCGCCGCCTGCCGCTTCCTGCCAGCCAAAAGCACTCTCAAAAATAGACCAAATGACGTgggg                                                                                                              >  2:155137/1‑251 (MQ=255)
                                                                                                         tGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGACCCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATATCCCGCCGCGCCGCCTGCCGCTTCCTGCCAGCCAAAAGCACTCTCCAAAATAGACCAAATGACGTGGGGa                                                                                                             >  2:79739/1‑250 (MQ=255)
                                                                                                                agtatgcccAGGGTGCAGAAAAAAATCCCAAACATCGGGACAACCCTTGCCGCGCCGGGGTGCGGAGGCCAGGACCCCGCTGCCGCTGCCGCGTTTGGGGTCGCCCCAATTCCCGCCTCATTGGAAAACATACTGCGCTGAAACCCGTTAGTAATCGCCTGGCTTAAGGTATATCCCGCCGCGCCGCCTGCCGCTTCCTGCCAGCCAAAAGCACTCTCAAAAATAGACCAAATGACGTGGGGAAGTTGccc                                                                                                     <  2:11383/244‑1 (MQ=255)
                                                                                                                                       aaTGCCAATCATCTGGACATCCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCGGCTGCCGCTGCCGCGTTGGGCGTCGACCCCTTTCCCGCCTCATTGGAAAACAGACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATATCCCGCCGCGCCGCCTGCCGCTTCCTGCCAGCCAAAAGCACTCTCAAAAATAGACCAAATGACGTGGGGAAGTTGCCCGATATTCATTACGCAAATCACCa                                                                              <  1:101614/251‑1 (MQ=255)
                                                                                                                                               ccaccgggACAATCCCTTGCGTTGCCGGGGGGGGGGGCCGGTCCGCCGCTGCCGCTGCCGCTTTTGGCGTCGACCCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATATCCCGCCGCGCCGCCTGCCGCTTCCTGCCAGCCAAAAGCACTCTCAAAAATAGACCAAATGACGTGGGGAAGTTGCCCGATATTCATTACGCAAATCACCAGGCTGGTc                                                                      <  2:222525/245‑1 (MQ=255)
                                                                                                                                                         aaTCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGACCCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATATCCCGCCGCGCCGCCTGCCGCTTCCTGCCAGCCAAAAGCACTCTCAAAAATAGACCAAATGACGTGGGGAAGTTGCCCGATATTCATTACGCAAATCACCAGGCTGGTCAGTAccc                                                               >  1:38647/1‑248 (MQ=255)
                                                                                                                                                                   cccggCCGGATGCGGGGCCCAGGACGCCGTTGCCGCTGCTGCGTGTGGCTACGACCCCATTCCCGTCGCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAAGCGCCTGGCTTAAGGTATATCCCGCCGCGCCTCCTGCCGCTTCCTGCCAGCCAAAAGCACGCTCAAAAATAGACCAAATGACGTGGGGAAGTTGCCCGATATTCATTACGCAAATCACCAGGCTGGTCAGTACCCAGATTATCGCCa                                                   <  1:244551/247‑1 (MQ=255)
                                                                                                                                                                           ggaggcgggggccagacccccgctgccgctcCCGCGTTTGGCGCCGCCCCCATCCCCGCCTCATTGGAAACCATACTGCGCTGAAACCCGTTAGTAATCGCCTGGCTTAAGGTATATCCCGCCGCGCCGCCTGCCGCTTCCTGCCAGCCAAAAGCACTCTCAAAAATAGACCAAATGACGTGGGGAAGTTGCCCGATATTCATTACGCAAATCACCAGGCTGGTCAGTACCCAGATTATCGCCATCAACgg                                            <  2:263495/232‑1 (MQ=255)
                                                                                                                                                                           gATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGACCCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATATCCCGCCGCGCCGCCTGCCGCTTCCTGCCAGCCAAAAGCACTCTCAAAAATAGACCAAATGACGTGGGGAAGTTGCCCGATATTCATTACGCAAATCACCAGGCTGGTCAGTACCCAGATTATCGCCATCAACggg                                           >  2:197828/1‑251 (MQ=255)
                                                                                                                                                                                              ccgctgccgctgCCGCGTTTGGCGTCGACCCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATATCCCGCCGCGCCGCCTGCCGCTTCCTGCCAGCCAAAAGCACTCTCAAAAATAGACCAAATGACGTGGGGAAGTTGCCCGATATTCATTACGCAAAtca                                                                                 >  1:14925/1‑193 (MQ=255)
                                                                                                                                                                                                                  ggCGTCGCCCCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATACCCCGCCGCGCCGCCTGCCGCTTCCTGCCAGCCAAAAGCACTCTCAAAAATAGACCAAATGACGTGGGGAAGTTGCCCGATATTCATTACGCAAATCACCAGGCTGGTCAGTACCCAGATTATCGCCATCAACGGGACAAACCCCTGCATGAGCCGGGCGACGCCATGAAGAcc     <  1:154318/251‑1 (MQ=255)
                                                                                                                                                                                                                     gTCGACCCCATTCCCGCCTCATTGGAAAACATCCTGCGCTGAAAACCGTTAGAAATCGCCTGGCTTAAGGTATATCCCGCCGCGCCGCCTGCCGCTTCCTGCCAGCCAAAAGCACTCTCCAAAATAGACCAAATGACGTGGGGAAGTTGCCCGATATTCATTACGCAAATCACCAGGCTGGTCAGTACCCAGATTATCGCCATCAACGGGACAAACCCCTGCATGAGCCGGGCGACGCCATGAAGACcgcg  >  1:90673/1‑251 (MQ=255)
                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                     
ACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGAACCCATTCCCGCCTCATTGGAAAACATACTGCGCTGAAAACCGTTAGTAATCGCCTGGCTTAAGGTATATCCCGCCGCGCCGCCTGCCGCTTCCTGCCAGCCAAAAGCACTCTCAAAAATAGACCAAATGACGTGGGGAAGTTGCCCGATATTCATTACGCAAATTACCAGGCTGGTCAGTACCCAGATTATCGCCATCAACGGGACAAAGCCCTGCATGAGCCGGGCGACGCCATGAAGACCGCG  >  NC_000913/6916‑7377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: