| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 6,933 | G→A | L343L (CTA→TTA) | yaaJ ← | putative transporter YaaJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 6,933 | 0 | G | A | 100.0% | 37.3 / NA | 15 | L343L (CTA→TTA) | yaaJ | putative transporter YaaJ |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (12/3); total (12/3) | |||||||||||
GTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGGCTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGTAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGAACCCATTCCCGCCTCATTGGAAAACATACTGCGCT > NC_000913/6686‑7166 | gTCAAATGGGTAATAGCCAGGCAGGCCATTATGAGATCTGCCAGTTGCCACATCAGCGGAAGACGTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCATTAacac < 2:13825/251‑1 (MQ=255) ccATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCATTAACACCCGCATCGCCTTCTgg > 1:222525/1‑251 (MQ=255) cATTATGATATCTGACAGTTGCCACATCAGCGGAAGACTAAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGCTTTCGGCGTAAATGGAGTTGGCAACGATGGCGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCATTAACACCCGCATCGCCTTCTGGATAAGCTGa > 1:53750/1‑250 (MQ=255) tATGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCATTAACACCCGCATCGCCTTCTGGATAAGCTGAATAc > 1:38053/1‑251 (MQ=255) tGATATCTGCCAGTTGCCACATCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGCACCCATTAACACCCGCATCGCCTTCTGGATAAGCTGAATACCt > 1:114388/1‑251 (MQ=255) gcTGCCAGTTGCCACCTCAGCGGAAGACTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGAACCCCAGGAACCCATTAACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTcc > 2:154318/2‑249 (MQ=255) gAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCATTAACACCCGCATCGCCTTCTGGATAAGCTGAAt > 1:48520/1‑186 (MQ=255) gAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCATTAACACCCGCATCGCCTTCTGGATAAGCTGAAt < 2:48520/186‑1 (MQ=255) gCAAACACAAGATCGTTTTGGGTTTTTTCAGGCAAAAAAAGAAGAGATTGTTTTCGGGTAAAATGTAGTGGACAACGATGGAGCTGAAGGCAAACAAAATAACCACGAGGTTAAAAACCCCAGCACCCCAGGAACCCATAAACCCCCCCATCGCCTTCGGGATAAGCTGAATCCCTTCCAGCGGCATGTGGTTTGGGCGTTTCCCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGgtg < 1:169806/251‑1 (MQ=255) acacAAGATCGATTTCGGGGTGTACAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTCAATGTAGTTGGCACCGATGGAGCTGAAGGCAAACAGAATACACACGAGGGTAACAAACTCAGCACCCCAGGAGCACCTTAACACACGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGATGGTGCCGTTACCCGCCAATAATATCAGCATGTCGCTTGCCGTCCAGATGACCAggcggtcgc > 2:244551/1‑244 (MQ=255) gggTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCATTAACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCAAGGCGCTTGCCGTACAGATGACCCGGGTGTCGATAAAAATGCCAatcat > 2:162903/1‑251 (MQ=255) aaaaGAAGAGATTGTTTTCGGCGTAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCATTAACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTCCAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTgc > 1:11383/1‑251 (MQ=255) gagaTTGTTTTCGGCGTAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCATTAACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGAGCCGTTACCCGCCAg > 1:175523/1‑168 (MQ=255) gagaTTGTTTTCGGCGTAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCATTAACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGGTGTGCCGTAACCCGCCAg < 2:175523/168‑1 (MQ=255) tGAAGGCAAACAGAATAACCACGAGGGTAACAAACTCAGCACCCCAGGAACCCATTAACACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCCGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGc > 2:101614/1‑251 (MQ=255) aCCCCAGGCACCAATTAACCCCCGCATCGCCTCCTGGATAAGCTGGATCCCTTCCAGCGGCCTGTAGGTTGTGCCGTTACCCGCCAGAAATCTCAGCATGGCGCTTGCCGTACAGATGACCAGGGAGTCGATCAACATGCCAAACATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCCGCCGCTGCCGCGTTTGGCGCCGCCCCCATTCCCGCCTCATTGGAAAACATACTGAGCt > 2:16477/1‑251 (MQ=255) | GTCAAATTGGTAATAGCCATGCAGGCCATTATGATATCTGCCAGTTGCCACATCAGCGGAAGGCTTAGCAAGGTGCCGCCGATGACCGTTGCGAAGGTGCAGATCCGCAAACACCAGATCGCTTTAGGGTTGTTCAGGCGTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAGCTGAAGGCAAACAGAATAACCACAAGGGTAACAAACTCAGCACCCCAGGAACCCATTAGCACCCGCATCGCCTTCTGGATAAGCTGAATACCTTCCAGCGGCATGTAGGTTGTGCCGTTACCCGCCAGTAATATCAGCATGGCGCTTGCCGTACAGATGACCAGGGTGTCGATAAAAATGCCAATCATCTGGACAATCCCTTGCGCTGCCGGATGCGGAGGCCAGGACGCCGCTGCCGCTGCCGCGTTTGGCGTCGAACCCATTCCCGCCTCATTGGAAAACATACTGCGCT > NC_000913/6686‑7166 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |