Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 18,322 C→T G278G (GGC→GGT nhaA → Na(+):H(+) antiporter NhaA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091318,3220CT100.0% 65.8 / NA 22G278G (GGC→GGTnhaANa(+):H(+) antiporter NhaA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (7/15);  total (7/15)

GGGCGTCTATATTCTTGTTGGCGTGGTGTTGTGGACTGCGGTGTTGAAATCGGGGGTTCACGCAACTCTGGCGGGGGTAATTGTCGGCTTCTTTATTCCTTTGAAAGAGAAGCATGGGCGTTCTCCAGCGAAGCGACTGGAGCATGTGTTGCACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGCGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGCCTGAGGGAACGACTTATCAGCAAATTATGGTGGTGGGGATCCTGTGCGGTATCGGTTTTACTATGTCTATCTTTATTGCCAGCCTGGCCTTTGGTAGCGTAGATCCAGAACT  >  NC_000913/18103‑18558
                                                                                                                                                                                                                           |                                                                                                                                                                                                                                            
gggCGTCTATATTCTGGTTGGCGTAGTGTTGTGGACTGCGGTGTTGAAATCGGGGGTTCACGCAACCCTGGCGGGGGTAATTGTCGGCTTCTTTATTCCTTTGACAGAGAAGCATGGGCGTTCTCCAGCGACGCGACTGGAGCATGTGTTACACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGCCCTCCATTCTGc                                                                                                                                                                                                               >  2:128704/1‑251 (MQ=255)
   cGTCTATATTCTGGTTGGCGTAGTGTTGTGGACTGCGGTGTTGAAATCGGGGGTTCACGCAACCCTGGCGGGGGTAATTGTCGGCTTCTTTATTCCTTTGAAAGAGAAGCATGGGCGTTCTCCAGCGAAGCGACTGGAGCATGTGTTACACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGACCTCCATTCTGCCAt                                                                                                                                                                                                            <  2:77349/251‑1 (MQ=255)
                      gtagtgtTGTGGACTGCGGTGTTGAAATCGGGGGTTCACGCAACCCTGGCGGGGGTAATTGTCGGCTTCTTTATTCCTTTGAAAGAGAAGCATGGGCGTTCTCCAGCGAAGCGACTGGAGCATGTGTTACACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCtt                                                                                                                                                                                         <  2:32600/248‑1 (MQ=255)
                         gtgtTGTGGACTGCGGTGTTGAAATCGGGGGTTCACGCAACCCTGGCGGGGGTAATTGTCTGCTTCTTTATGCCTTTGAAAGAGAAGCATGGGCGTTCTCCAGCGAAGCGACTGGAGCATGTGTTACACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGCTGGCTTGACCTCCATTCTGCCAGTGGGGATCATCGCTGGCTTGCt                                                                                                                                                                                      <  2:231263/251‑1 (MQ=255)
                              gtgGACTGCGGTGTTGAAATCGGGGGTTCACGCAACCCTGGCGGGGGTAATTGTCGGCTTCTTTATTCCTTTGAAAGAGAAGCATGGGCGTTCTCCAGCGAAGCGACTGGAGCATGTGTTACACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTg                                                                                                                                                                                 >  1:207684/1‑251 (MQ=255)
                                        gggtTGAAATCGGGGGTTCACGCAACCCGGGCGGGGGTAATTGGCGGCTTCTTTATTCCTTTGAAAGAGAAGCATGGGCGTTCTCCAGCGAAGCGACTGGAGCATGTGTTACCCCCGTGGGTGGCGTATCTGATTTTGGCGCGGGTTGGATGTGCTAATGCTGGCGGTTCACTGCAAGGTGTCACGGTGGGTGGCTTGACCTCCATTCTGTCATTGGGGATCATCGCTGGCTCGCTGATTGGTAAACCGCt                                                                                                                                                                       <  2:29836/249‑1 (MQ=255)
                                                          cACGCAACCCTGGCGGGGGTAATTTTCGGCTTCTTTATTCCTTTGAAAGAGAAGCATGGGCGTTCTCCATCGAAGCGACTGGAGCATGTGTTACACCCGTGGGTGGCGTATCTGAGTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTctg                                                                                                                                                     <  2:227183/251‑1 (MQ=255)
                                                          cACGCAACCCTGGCGGGGGTAATTGTCGGCTTCTTTATTCCTTTGAAAGAGAAGCATGGGCGTTCTCCAGCGAAGCGACTGGAGCATGTGTTACACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTTTGTTct                                                                                                                                                      <  1:35541/250‑1 (MQ=255)
                                                                             tAATTGTCGGCTTCTTTATTCCTTTGAAAGAGAAGCATGGGCGTTCTCCAGCGCAGCGACTGGAGCATGTGTTACACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGCCCTCCATTCTGCCATTGGGTATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTCTGCTTGATTGCGCTACGTTTg                                                                                                                                  >  2:87530/1‑251 (MQ=255)
                                                                                    cGGCTTCTTGATTCCTTTGAAAGAGAAGCATGGTCGTTCTCCAGCGAAGCGACTGGAGCATGTGTGACACCCGGGGGTGGCGTATCTGATTTTGTCGCTGTTTGCATTTGGTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGGTTGACCGCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCGATGCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTg                                                                                                                            <  1:167639/250‑1 (MQ=255)
                                                                                             tATTCCTTTGAAAGAGAAGCATGGGCGTTCTCCAGCGAAGCGACTGGAGCATGTGTTACACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGACCTCCATTCTGCAATTGGGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGc                                                                                                                  >  1:201021/1‑251 (MQ=255)
                                                                                                       aaaGAGAAGCATGGGCGTTCTCCAGCGAAGCGACTGGAGCATGTGTTACTCCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTGTCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGTTGGACTTCCATTCTGCCATTGTGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGCCTGAGGGAAc                                                                                                        <  1:44258/251‑1 (MQ=255)
                                                                                                        aaGAGAAGCATGGGCGTTCTCAAGCGAAGCGACTGGAGCATGTGTTAGACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGCCTGAGGGAACg                                                                                                       >  2:156640/1‑251 (MQ=255)
                                                                                                         agagAAGCATGGGCGTTCTCCAGCGAAGCGACTGGAGCATGTGTTACACCCGTGGGTGGCGTATCTGATTTGGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTTACCTCCATGCGGCCATTGGTGATCATCGCTGGCTTGCTGATTGGCATTTCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGCCTGAGGGAACGa                                                                                                      <  1:117030/251‑1 (MQ=255)
                                                                                                                       gTTCTACAGAGAAGCGACTGGAGCATGTGTTACACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGCCTGAGGGAACGACTTATCAGCAAAtt                                                                                        >  2:161256/1‑251 (MQ=255)
                                                                                                                                      ggctgttgcatgtgtttccacggtgggtggCGTATCTGATTTTGCCGCTGTGTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGCCCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCATACCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGCCTGAGGGAACGACTTATCAGCAAATTATGGCGGTGGGGATc                                                                         <  2:206506/229‑1 (MQ=255)
                                                                                                                                      gaCTGGAGCATGTGTTACACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGCCTGAGGGAACGACTTATCAGCAAATTATGGCGGTggggggc                                                                         >  1:149311/1‑248 (MQ=255)
                                                                                                                                                          ccGTGGGGGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTTGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCGGATTGGCAAACCGCTGGGGATTAGTCTGTTCGGCTGGTTGGCGCTGCTTTTGAAGCTGGCGCATCTGCCTGAGGGATCGACTTATCAGCAAATTATGGCGGTGTGGATCCTGTGCGGTATCGGTTTTAc                                                     <  2:256860/251‑1 (MQ=255)
                                                                                                                                                                  ggCGTATCTGAGTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGCCTGAGGGAACGACTTATCAGCAAATTATGGCGGTGTGGATCCTGTGCGGTATCGGTTTTACTATGTCt                                              <  1:106945/250‑1 (MQ=255)
                                                                                                                                                                           gATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGCCTGAGGGAACGACTTATCAGCAAATTATGGCGGTGGGGATCCTGTGCGGTATCGGTTTTACTATGTCTATCTTTa                                       <  1:190855/248‑1 (MQ=255)
                                                                                                                                                                                                     aTGCTGGCGTTTCACTGCAAGGTGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGCCTGAGGGAACGACTTATCAGCAAATTATGGCGGTGGGGATCCTGTGCGGTATCGGTTTTACTATGTCTATCTTTATTGCCAGCCTGGCCTTTGGTAGCGGAGAt          <  1:87530/251‑1 (MQ=255)
                                                                                                                                                                                                              tttCCCTGCAAGGTGTCACGCTGGATGGCTTGACCGCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGCCTGAGGGAACGACTTATCAGCAAATTATGGCGGTGGGGATCCTGTGCGGTATCGGTTTTACTATGTCTATCTTTATTGCCAGCCTGGCCTTTGGTAGCGTAGATCCAGAACt  <  2:262161/250‑1 (MQ=255)
                                                                                                                                                                                                                           |                                                                                                                                                                                                                                            
GGGCGTCTATATTCTTGTTGGCGTGGTGTTGTGGACTGCGGTGTTGAAATCGGGGGTTCACGCAACTCTGGCGGGGGTAATTGTCGGCTTCTTTATTCCTTTGAAAGAGAAGCATGGGCGTTCTCCAGCGAAGCGACTGGAGCATGTGTTGCACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGCGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGCCTGAGGGAACGACTTATCAGCAAATTATGGTGGTGGGGATCCTGTGCGGTATCGGTTTTACTATGTCTATCTTTATTGCCAGCCTGGCCTTTGGTAGCGTAGATCCAGAACT  >  NC_000913/18103‑18558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: