Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,509,5440GA47.6% 4.8 / 80.2 64pseudogene (66/315 nt)insOIS911B regulator fragment
Reads supporting (aligned to +/- strand):  ref base G (14/19);  new base A (11/19);  total (26/38)
Fisher's exact test for biased strand distribution p-value = 7.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.98e-01
Rejected as consensus: E-value score below prediction cutoff.
Rejected as consensus: Frequency below/above cutoff threshold.

CGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTG  >  NC_000913/4509299‑4509792
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                         
cGGTGATGTGACCTATATCAGGACGTGTAAGCGCGTGGCGTACCTCGCCGTTGGTCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGATCCAGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGAGGTTCCA‑AGCGATCAAGGCAGTCACTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATAACGGACCAGGCagag                                                                                                                                                                                                                                                      <  2:247322/251‑1 (MQ=255)
 ggTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGt                                                                                                                                                                                                                                                     >  1:10557/1‑251 (MQ=255)
    gATGTGACCTATAGCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGGCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTAt                                                                                                                                                                                                                                                   <  2:202235/251‑1 (MQ=255)
       gtgACCTCTATCTGGACAGGTAAGCGCTGGGCGTACCTCGCCGTTGATCTCGACCTGTTCGCAAGAAAAACAGTGGGCTGGGCCATGTCGTTCTGGCCCGACAGCAGGCTAACCATGAAAGCACTGGAAATGGCATGGGAAACACGTGGGAAGCCCGACGGGGAGATGTTACA‑AGCGATCAAGGCAGTAAGTAAACGAGCAGACAGTTCCGGCAGTTAATGGGGCGATAGCGGATCAGGCAGAGCATGAgg                                                                                                                                                                                                                                               >  1:45710/1‑250 (MQ=255)
              atatCTGGACGGGTAATCGCTGGTCGTACCTCGCCGTTGTTCGCTACCTGTTCCCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGGCGGACAGCAGGCTTACCATGAAAGCACTGCAAATGACATGGGAAACCCGTGCTAAGCCCGTCTGGGTGATCTTCCA‑ATCGATCAATCCAGTCAGTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTg                                                                                                                                                                                                                                        <  1:237576/251‑1 (MQ=255)
                atCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCgcg                                                                                                                                                                                                                                        <  1:171885/250‑3 (MQ=255)
                      aCGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTGCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTTTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAActg                                                                                                                                                                                                                                 <  1:89148/251‑1 (MQ=255)
                        gggTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAActgct                                                                                                                                                                                                                               >  1:32630/1‑251 (MQ=255)
                              gcgcTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATa                                                                                                                                                                                                                         <  1:27843/251‑1 (MQ=255)
                                             cgtcGTTGTTCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACCGCCCCATGGAgcg                                                                                                                                                                                                         <  2:21224/248‑1 (MQ=255)
                                                  ttgttCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGt                                                                                                                                                                                                                                                     <  1:80403/203‑1 (MQ=255)
                                                  ttgttCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGGGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGTTAACAGATCAGGCagagc                                                                                                                                                                                                                                                     >  2:80403/1‑202 (MQ=255)
                                                         cGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGGGATGTTCCACAGCGTTCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTCTGAGCCGGCGCGGAACCCGCTGGGATAACTGCCCAGTGGAACCCTTTTTCAgtg                                                                                                                                                                                              >  2:68485/1‑249 (MQ=255)
                                                          gACCTGTTCGCAAGAAAACCAGTGGGCTGGGCAATGTCGTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGGGCGCTTCTTCAGGAGt                                                                                                                                                                                            >  2:88312/1‑251 (MQ=255)
                                                            ccTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCt                                                                                                                                                                                          >  1:4968/1‑251 (MQ=255)
                                                               gTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTTGGATAACAGCCCAATGTAACGCTTCTTCAGGAGTCt                                                                                                                                                                                          <  2:32630/249‑1 (MQ=255)
                                                                ttCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGAACAGCAGGCTTACCATGAAAGCAATGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTgagg                                                                                                                                                                                      >  2:232155/1‑249 (MQ=255)
                                                                  cGCAAGAAAACCAGGGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGATCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTgaag                                                                                                                                                                                      <  2:103123/250‑1 (MQ=255)
                                                                     aaGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGCCAGCAGGCTCACCATGAAAGCGCTGGAACTGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGCTGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAAATGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACg                                                                                                                                                                                  >  2:239222/1‑251 (MQ=255)
                                                                       gAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTTACAATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAt                                                                                                                                                                               >  1:244420/1‑251 (MQ=255)
                                                                       gAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGaa                                                                                                                                                                                <  2:85359/251‑1 (MQ=255)
                                                                        aaaaCCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑g                                                                                                                                                                             <  1:221013/251‑1 (MQ=255)
                                                                            ccAGTGGGCTGGGCCATGTCGTGCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATTTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGAGAACAGCCCAATGGAACGCGTCTTCAGGAGTCTGAAGAACGAAT‑ggat                                                                                                                                                                          <  2:13354/251‑3 (MQ=255)
                                                                                   gctgggcCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGccggtg                                                                                                                                                                   <  1:171423/251‑5 (MQ=255)
                                                                                      gggcCAGGTCGTTCGCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGAGCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGGCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCGTCAGGAGGCTGAAGATCGAAT‑GGGTGCCAGCGAc                                                                                                                                                                 <  2:176865/249‑1 (MQ=255)
                                                                                                gTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAg                                                                                                                                                     <  2:10557/251‑1 (MQ=255)
                                                                                                 ttCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGc                                                                                                                                                    >  2:231977/1‑251 (MQ=255)
                                                                                                       ccGGACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAg                                                                                                                                               <  2:206607/251‑1 (MQ=255)
                                                                                                        cGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCg                                                                                                                                             >  2:70770/1‑251 (MQ=255)
                                                                                                         ggACAGCAGGCTCACCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAGCg                                                                                                                                             <  2:103841/251‑1 (MQ=255)
                                                                                                                   cTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCAc                                                                                                                                  >  2:138525/1‑251 (MQ=255)
                                                                                                                    ttACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACg                                                                                                                                 >  1:203262/1‑251 (MQ=255)
                                                                                                                     caCCATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACg                                                                                                                                 <  2:106220/250‑1 (MQ=255)
                                                                                                                       ccATGAAAGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGcc                                                                                                                               <  2:265456/251‑2 (MQ=255)
                                                                                                                         aTGAAAGCTCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGccat                                                                                                                             <  1:165432/251‑4 (MQ=255)
                                                                                                                           gAAAGCTCTGTAAGTGGCATGGTAAACCCGTGGTAAGCCCTTCGGGGTGATGTGCCA‑AGCGAGTAAGGCAGTCATTATACTAGCAGGCAGTTCCGGCAGTTACTGTGGCGATTCCGGATCAGGCAGAGGATTAGTCGGCGTGGAAACGGCTGGGATAACAGCCCCATTGAGCGCTTCTTCAGTGGTCTGAAGAACCAATTGGGT‑CCAGCGACGGGCTATGTAAGCTGCAGCGATTCTGCTTACTCAATAAc                                                                                                                          <  2:32337/251‑1 (MQ=255)
                                                                                                                            aaaGCGCTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAAc                                                                                                                          >  1:209623/1‑251 (MQ=255)
                                                                                                                              agcgcTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAACgg                                                                                                                        >  1:26608/5‑251 (MQ=255)
                                                                                                                                   tGGAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAACGGACtct                                                                                                                   >  2:4386/1‑249 (MQ=255)
                                                                                                                                     gAAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTGCAGGAGGCTTAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAACGGACTatat                                                                                                                 <  1:239222/251‑1 (MQ=255)
                                                                                                                                          ggCATGGGAAACCCGGTGTAAGCCCGTCGGGGTGATGTTCCA‑AGAGATCAAGGCAGTCATGATGCGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGGTGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCGTCTTCAGGAGTCTGAAGAACGAAG‑GGGGGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAAATCACTATATCGtggg                                                                                                           <  2:39026/251‑4 (MQ=255)
                                                                                                                                                ggAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATCACAGCCCCATGGCGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATAtt                                                                                                      >  1:141962/1‑250 (MQ=255)
                                                                                                                                                  aaaCCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCATGCCATAACGGACTATATCGTTGGATATTAc                                                                                                    <  1:46698/251‑1 (MQ=255)
                                                                                                                                                    aaccgaggTAAGCCCGTCTGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATGATACGAGCAGTCAGTTCCTGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTAGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCATGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGTCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTAGATCTTTGGATATTACAgc                                                                                                 <  2:177056/245‑1 (MQ=255)
                                                                                                                                                          ggTAAGCCCGTCTGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTTGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATTTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTa                                                                                           <  1:47511/251‑1 (MQ=255)
                                                                                                                                                             aaGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGa                                                                                        <  1:252830/251‑1 (MQ=255)
                                                                                                                                                              aGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGAc                                                                                       <  2:4968/251‑1 (MQ=255)
                                                                                                                                                              aGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGAc                                                                                       <  1:225923/251‑1 (MQ=255)
                                                                                                                                                               gCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAACGGACTATATCGTTGGATATTACAGCGCACTAAGAc                                                                                       <  1:243870/251‑1 (MQ=255)
                                                                                                                                                                   gTCGGGGTGATGTTCCA‑AGCGATCCAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCTCACTAAGCCCGCAc                                                                                  <  1:67350/251‑1 (MQ=255)
                                                                                                                                                                         gTGATGTTCCA‑AGCGATCAAGGCAGTCATTAGACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAatat                                                                            <  1:259939/251‑1 (MQ=255)
                                                                                                                                                                             tGTTCCACAGCGAACAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCCAATCCGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGCTCAAAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGCTACGTAAGCTTCAGCGAGGCAGCTAACGCCATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAatatcac                                                                         >  2:21155/1‑248 (MQ=255)
                                                                                                                                                                                  cA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTggg                                                                   >  1:123756/1‑251 (MQ=255)
                                                                                                                                                                                     aGCGATCAGGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGtt                                                                 >  2:239449/1‑251 (MQ=255)
                                                                                                                                                                                           cagtgCAGTCATTATACGAGCAGGCAGTTTCGGCAGTTATTGTGGCGATCCCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACCGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAACGGACTATATCGTTGGATATTACAGCGCACTAAGAACGCACGAATATAACGGTGGGTTaccccc                                                           >  2:96026/5‑248 (MQ=255)
                                                                                                                                                                                           cAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTaccacc                                                           <  1:138525/251‑1 (MQ=255)
                                                                                                                                                                                            aaGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGCTCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGCTAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTcccacc                                                           >  1:153231/1‑250 (MQ=255)
                                                                                                                                                                                             aGGCAGTCATTATACGAGCAGGCAGTGCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCGTCAGCGATGCAGCTCACGCAATAACGGACTATATCGGTGGATATTACAGCGCACTAAGACCGCACGAGTATAATGGTGGGTTACCACCaa                                                         <  2:244420/251‑1 (MQ=255)
                                                                                                                                                                                                    cATTATACGAGCAGGCAGTTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACGGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATc                                                  <  2:26608/251‑1 (MQ=255)
                                                                                                                                                                                                            gAGCAGGCAGTTACGGCAGTTATTGTGGCGATACCAAATCAGCCAGCGGCTGAGCCGCCGAGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGGGGGTTACGTAAGCTTCAGCGAGGACGCTCACGCCATAACGGACTATATCGTTGGATCTTACAGCGCACTAAGACCGCACGCATATAACGGGGGGCTAACCCCAAACGAATCGGaaaatc                                          >  2:53889/1‑249 (MQ=255)
                                                                                                                                                                                                                 ggcagTTCAGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCAGGAGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGGaaaatagaaac                                     >  2:202802/1‑244 (MQ=255)
                                                                                                                                                                                                                                               ggATCAGGCAGAGTATGAGTCGGCGGGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGtttt       <  2:257816/251‑1 (MQ=255)
                                                                                                                                                                                                                                                 aTCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAACGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGGAAAATCGATACTGGAAAAACTCTAACGCGGTGGCCAGtttttg     >  2:115186/1‑249 (MQ=255)
                                                                                                                                                                                                                                                    aGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCCATGGAGCGCTTCTCCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTg  <  1:74411/251‑1 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                         
CGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCA‑AGCGATCAAGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGCGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAAT‑GGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTG  >  NC_000913/4509299‑4509792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑