Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,541,425 IS1 (–) +8 bp coding (469‑476/603 nt) fimB → Type 1 fimbriae regulatory protein FimB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)28 (1.060) 21/490 0.3 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 4541425 = 0 (0.000)coding (469/603 nt) fimB Type 1 fimbriae regulatory protein FimB
* ? NC_000913 = 3584195NA (NA)31 (1.170) 26/490 0.2 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 4541432 0 (0.000)coding (476/603 nt) fimB Type 1 fimbriae regulatory protein FimB

CAACGCACCCGCTATTGAATAAAGAAGTTCAGGCTTTAAAAAACTGGTTGAGTATCCGTACTTCGTACCCGCATGCTGAGAGCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCAGGGATGGTGTTAAAAACTACATTATTCTTACGATATATCAAAAATGATTAACCATTTATTAATTGATGTTATTGTAAGTGTGATTCTTAATTATCATAATAAAC  >  NC_000913/4541186‑4541680
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                        
caacGCACCCGCTATTGAATAAAGAAGTTCAGGCTTTAAAAAACTGGTTGAGTATCCGTACTTCGTACCCGCATGCTGAGAGCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggt                                                                                                                                                                                                                                                       <  1:194447‑M2/250‑4 (MQ=255)
     gccatatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCa                                                                                                                                                                                                                                                 <  2:70274‑M2/17‑1 (MQ=255)
     gccatatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagagacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCa                                                                                                                                                                                                                                                 <  1:113346‑M2/17‑1 (MQ=255)
         cGCTATTGAATAAAGAAGTTCAGGCTTTAAAAAACTGGTTGAGTATCCGTACTTCGTACCCGCATGCTGAGAGCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactcca                                                                                                                                                                                                                                             >  2:194447‑M2/1‑238 (MQ=255)
            caattattttctggtgcgtaccgggttgagaagcgggttaagtgaactgcagttgccatgggttacggcagtgagagcagagatagcgcttatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcaactcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTAt                                                                                                                                                                                                                                          <  1:51954‑M2/24‑1 (MQ=255)
             aTTGAATAAAGAAGTTCAGGCTTTAAAAAACTGGTTGAGTATCCGTACTTCGTACCCGCATGCTGAGAGCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaact                                                                                                                                                                                                                                          >  1:150105‑M2/1‑234 (MQ=255)
                            tCAGGCTTTAAAAAACTGGTTGAGTATCCGTACTTCGTACCCGCATGCTGAGAGCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCGCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgtttt                                                                                                                                                                                                                           >  1:162926‑M2/1‑219 (MQ=255)
                                ccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGCTTATCTTGGGCATCGCAATCTTCg                                                                                                                                                                                                                      >  2:147856‑M2/208‑251 (MQ=255)
                                ccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCg                                                                                                                                                                                                                      >  1:36907‑M2/208‑251 (MQ=255)
                                  gggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTc                                                                                                                                                                                                                    >  2:241811‑M2/206‑251 (MQ=255)
                                  gggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTc                                                                                                                                                                                                                    <  1:124193‑M2/46‑1 (MQ=255)
                                            gcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacgccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTg                                                                                                                                                                                                          <  1:133341‑M2/56‑1 (MQ=255)
                                            gcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATAGTCGTCATACTGTCTg                                                                                                                                                                                                          <  1:36308‑M2/56‑1 (MQ=255)
                                             ggTTGAGTATCCGTACTTCGTACCCGCATGCTGAGAGCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgccc                                                                                                                                                                                                          >  1:60912‑M2/1‑202 (MQ=255)
                                               ttGAGTATCCGTACTTCGTACCCGCATGCTGAGAGCGAGTGGGTATTTTTATCACGTACGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                                                                                                                                                                       <  2:35040‑M2/251‑52 (MQ=255)
                                                tGAGTATCCGTACTTCGTACCCGCATGCTGAGAGCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgccc                                                                                                                                                                                                          <  1:115543‑M2/247‑49 (MQ=255)
                                                tGAGTATCCGTACTTCGTACCCGCATGCTGAGAGCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgccc                                                                                                                                                                                                          >  2:115543‑M2/1‑199 (MQ=255)
                                                     aTCCGTACTTCGTACCCGCATGCTGAGAGCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                                                                                                                                 <  2:100734‑M2/251‑58 (MQ=255)
                                                             ttCGTACCAGCATGCAGAGAGCGAGTGGGTCTTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGTGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATCTGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgaggactttgtcatgcg                                                                                                                                                                                         <  2:191527‑M2/251‑66 (MQ=255)
                                                             gtcGTCCCCGCATGCTGAGAGCGAGGGGGTATTTTTATCACGTAAGGCGAATCCGCTTTCTCGGCAACAGTTTTACCCTATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGTAGATTCATCCGCACATGTTACGCCATTCGTGTGGCTTTGCTTTGGCGAATATGGGAATAGATACGCGggtcatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcttgc                                                                                                                                                                                          <  2:51954‑M2/249‑65 (MQ=255)
                                                                  aCCCGCATGCTGAGAGCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatattgttttatgttcagataatgcccgatgactttgtcatgcagctcc                                                                                                                                                                                    <  1:200516‑M2/251‑71 (MQ=255)
                                                                  aCCCGCATGCTGAGAGCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc                                                                                                                                                                                    <  1:29439‑M2/251‑71 (MQ=255)
                                                                          gCTGAGAGCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt                                                                                                                                                                            <  1:194210‑M2/251‑79 (MQ=255)
                                                                                agCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgaga                                                                                                                                                                       <  1:202152‑M2/250‑84 (MQ=255)
                                                                                  gtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCt                                                                                                                                                                    >  2:268690‑M2/158‑251 (MQ=255)
                                                                                       agcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGAt                                                                                                                                                               <  1:14058‑M2/99‑1 (MQ=255)
                                                                                             ttttATCACGAAAGGGGAATCCGCTTTCTCGACAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCCCTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtctttcagctccaccgattttgagaacgacaacgacttc                                                                                                                                                         <  2:175327‑M2/251‑98 (MQ=255)
                                                                                                                 ccGCTGTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGGCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgccctatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggt                                                                                                                                      >  2:194210‑M2/1‑134 (MQ=255)
                                                                                                                       ttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGtttt                                                                                                                               >  2:78920‑M2/121‑251 (MQ=255)
                                                                                                                          cGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctca                                                                                                                             >  1:33164‑M2/1‑125 (MQ=255)
                                                                                                                                    tttACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgcgaacgacagcgacttccgtcccagccgtgccagctgctgcctcagattccggttt                                                                                                                  <  1:24322‑M2/251‑137 (MQ=255)
                                                                                                                                         ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATa                                                                                                             <  1:268690‑M2/149‑1 (MQ=255)
                                                                                                                                           tattatCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgct                                                                                                           <  1:227282‑M2/251‑144 (MQ=255)
                                                                                                                                             cagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCa                                                                                                          <  2:189661‑M2/152‑1 (MQ=255)
                                                                                                                                                     gaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCAGGGATgg                                                                                                   <  1:199690‑M2/159‑1 (MQ=255)
                                                                                                                                                     gaacaggagggacagatgatagaaacagaagccacgggagcacctcaaaaacaccatcataccctaaataagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGTGATAGAGCCAGAGGACGACAGCGTCACGCGGTTTTATAGAGATAGTTGAGATACCAGGGATgg                                                                                                   <  2:142388‑M2/159‑1 (MQ=255)
                                                                                                                                                                     ccGGGTGGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacatcgacttccgtcccagccgtgccaggtgctgcctcatattcaggttatgccgctcaattcgctgcgtatatcgcttgctg                                                                                 >  1:224774‑M2/1‑82 (MQ=255)
                                                                                                                                                                            gTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgt                                                                          <  1:56328‑M2/251‑177 (MQ=255)
                                                                                                                                                                              cACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtg                                                                         >  2:111620‑M2/1‑73 (MQ=255)
                                                                                                                                                                              cACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacgtattgatagttttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagctacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtg                                                                         >  1:196285‑M2/1‑73 (MQ=255)
                                                                                                                                                                              cACTGGAGAGTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtg                                                                         >  1:191527‑M2/1‑73 (MQ=255)
                                                                                                                                                                                cTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTATGCCGACTATGGGAATAGATACGCGggaaatgactccaacttcttgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaaggacagcgacttccgtcccagccgtgccagctgctgcctcagcttcaggttatgccgctcaattcgctgcgtatatcgcttgctgattccgtgc                                                                        <  1:14397‑M2/249‑179 (MQ=255)
                                                                                                                                                                                 aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagtttgcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCAGGGATGGTGTTAAAAACTACATTATTCTTACGatata                                                                     <  1:196275‑M2/189‑1 (MQ=255)
                                                                                                                                                                                    ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCAGGGATGGTGTTAAAAACTACATTATTCTTTCGATATATCa                                                                  <  1:86879‑M2/192‑1 (MQ=255)
                                                                                                                                                                                     gaTTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttc                                                                 <  1:200019‑M2/251‑186 (MQ=255)
                                                                                                                                                                                                         accatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCAGGGATGGTGTTAAAACTACATTATTCTTACGATATATCAAAAATGATTAACCATttatta                                             >  1:194153‑M2/39‑250 (MQ=255)
                                                                                                                                                                                                          ccatcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCAGGGATGGTGTTAAAAACTACATTATTCTTACGATATATCAAAAATGATTAACCATTTATTaa                                            <  2:78903‑M2/214‑1 (MQ=255)
                                                                                                                                                                                                           cATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacag                                           >  2:202152‑M2/1‑44 (MQ=255)
                                                                                                                                                                                                            atcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCAGGGATGgt                                                                                                  >  2:152904‑M2/36‑195 (MQ=255)
                                                                                                                                                                                                            atcatacactaaatcagtaagttggcagcatcaccGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCAGGGATGgt                                                                                                  <  1:152904‑M2/160‑1 (MQ=255)
                                                                                                                                                                                                                                    atatGGGAATCGATACGAGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggatatgccgctcaattcgctgcgtatatcgcttgctgcttacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatc                  <  2:258574‑M2/251‑233 (MQ=255)
                                                                                                                                                                                                                                      atGGGAATAGATACGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatca                 >  1:175327‑M2/1‑17 (MQ=255)
                                                                                                                                                                                                                                             ccGATACGCGCCTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTCCGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGCGATACCAGGGATGGTGTTAAAAACTACATTATTCTTACGATATATCAAAAATGATTAACCATTTATTAATTGATGTTATTGTAAGTGTGATTCTTAATTATCAt         >  2:32907‑M2/3‑251 (MQ=255)
                                                                                                                                                                                                                                                ataaccgACTTAGCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGGATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCAGGGATGGTGTTAAAAACTTCATTATTCTTACGATATATCAAAAATGATTAACCATTTATTAATTGATGTTATTGTAAGTGTGATTCTTAATTATCataat      <  1:147856/246‑1 (MQ=255)
                                                                                                                                                                                                                                                    gcgggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgtgcagctttcccttcaggcgggattcatacagcggccagccatccgtcatccatatcaccacgtcaaagggtg  <  2:211604‑M2/251‑249 (MQ=255)
                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                        
CAACGCACCCGCTATTGAATAAAGAAGTTCAGGCTTTAAAAAACTGGTTGAGTATCCGTACTTCGTACCCGCATGCTGAGAGCGAGTGGGTATTTTTATCACGTAAGGGGAATCCGCTTTCTCGGCAACAGTTTTACCATATTATCTCGACTTCCGGTGGTAATGCCGGGTTGTCACTGGAGATTCATCCGCACATGTTACGCCATTCGTGTGGTTTTGCTTTGGCGAATATGGGAATAGATACGCGACTTATCCAGGATTATCTTGGGCATCGCAATATTCGTCATACTGTCTGGTATACCGCCAGCAATGCAGGGCGTTTTTACGGCATCTGGGATAGAGCCAGAGGACGACAGCGTCACGCTGTTTTATAGAGATAGTTGAGATACCAGGGATGGTGTTAAAAACTACATTATTCTTACGATATATCAAAAATGATTAACCATTTATTAATTGATGTTATTGTAAGTGTGATTCTTAATTATCATAATAAAC  >  NC_000913/4541186‑4541680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.